Siniperca chuatsi (mandarin fish): 122882720
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Entry
122882720 CDS
T08948
Name
(RefSeq) serine/arginine-rich splicing factor 6-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03040
Spliceosome
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122882720
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122882720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122882720
Spliceosome [BR:
schu03041
]
Common components
Common spliceosomal components
SR proteins
122882720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_occluded
DbpA
Motif
Other DBs
NCBI-GeneID:
122882720
NCBI-ProteinID:
XP_044066345
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All DBs
Position
LG10:complement(11745239..11751442)
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AA seq
376 aa
AA seq
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MPRVYIGRLSYHVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIVEHARGPRRDRDGYGGGYWGGGRSSGYSSRSRSGRDKYGPPVRTEYRLIVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSQSDMKRALDKLDGTDINGRKIRL
VEDRPRRRRSYSGSRSRSRSRRRSRSRSRRSHRSRSSRSRSRSHSRSLSRSNKRRHRSRS
RSGRKSRSKSGGSKSRSRNRRSRSRSRKSKSRSRSRKSRSRSADRKSKSRSKSCSKVKSE
RGSRSRSKEMSGDKKSRSRSASPVENGKEERVAKSASRSPSPQEDDCRSKSREKRSASRS
KSRSRSRSRSRSASQD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgtttatattggacgattaagctatcatgtccgcgaaaaagacattcagcga
ttttttagcggatatggaaagctcatggaaatcgatttgaaaaacggctatggattcgtg
gagttcgaggataaccgggacgccgacgatgccgtgtacgagctgaacgggaaggagctg
tgcggggagcgggtgatcgtcgaacatgcccgggggccgcggcgagatcgagatggctac
ggtgggggttactggggtggtgggcgcagtagcggctacagcagccggagccgctctggc
agggataagtatgggcctccagtccgtactgagtaccgcctcattgtggagaacttgtcc
agccgctgtagttggcaggacctcaaggacttcatgcgtcaggcaggagaggtgacttat
gcagatgcccacaaggaacgcacaaatgagggagtgatcgagtttcggagccagtcggac
atgaagagggctctggacaagctggacggcacagacatcaacggacggaagattcgtctt
gtggaggaccggcctcgcagacggaggtcttactctggcagccgctccagatctcgtagt
cgccgccgctcccgcagcaggagtcgcagaagccacagaagcaggagctccaggagtcgc
tccagatcacactctaggtctctttctcgtagcaacaagagacgtcatcgctcccgctcc
agatctggaaggaagtctcgctccaagtcaggaggaagcaaatcacgttctcgcaaccgc
aggtcccgttcacgctcccgcaaatccaaatctcgttcacgctcccgcaaatcccggtcc
cgttcagccgaccggaaatccaagtctcgttcaaagagctgttcaaaggtaaagtcagag
cggggttctcgcagtcgatccaaggagatgtctggtgacaagaagtcccgcagtcgttca
gcttccccagtggagaacgggaaggaggagcgtgtcgccaaatctgcctcccgctccccc
tccccacaggaggatgactgccgatccaagtcaagggagaaacgttcagcctcccgctcc
aagtcccgctcaaggtctcgctcgcggtctagatcagcgtctcaggattag
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