Siniperca chuatsi (mandarin fish): 122882831
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Entry
122882831 CDS
T08948
Symbol
top1b
Name
(RefSeq) DNA topoisomerase 1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schu03032
]
122882831 (top1b)
Enzymes [BR:
schu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
122882831 (top1b)
DNA replication proteins [BR:
schu03032
]
Eukaryotic type
DNA Topoisomerases
122882831 (top1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
122882831
NCBI-ProteinID:
XP_044066578
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Position
LG10:18985598..18998596
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AA seq
769 aa
AA seq
DB search
MSGDHGHGDSQVNSGSKGSVTHKHKDKHKDKEHRHKDHKKDKEREKFRHSNSEHKDHSER
KHRDKEKLKHSDSSSDKHREKHKEKDKDKEKRREEKIKSSYVDKPKKEKENGYVRDASSP
AIKSEPEEDNGFYPSPQHNKTSKREYDDEEFEYKPKKVKTEHDKKAKKRKHEYEEDEEDE
DIKPKKKTKDKNVTEGKKAKKEEEEKWKWWEEERYTDGSKWRFLEHKGPVFAPPYEPLPD
KVKFFYDGKPMKLSAPAEEVATFFAKMLDHEYTTKDIFRKNFFKDWRKEMTSEEKSKITD
LNKCNFSEMNEYFKAQSEARKQLSKEEKQKNKEENERLLQEYGFCIMDNHKERIGNFRIE
PPGLFRGRGDHPKMGMLKRRIRPEDIIINCSKDSKHPKPPPGTKWKEVRHDNKVTWLVSW
TENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDRLRTQYRDDWKSKEMRIRQRA
VALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIKLYPKMDDQEYVVEFDFLGKDSIR
YYNKIPVEKRVFKNLQLFLENKQPEDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASI
TLQQQLKELSCSDDSIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDEKQN
QLSAARKQLKAAKADHKASHDDKSKKAVEVKRKAVQRIEEQLMKLQVQATDREENKQIAL
GTSKLNYLDPRISVAWCKKWGVPIEKIYNKTQREKFAWAIDMADKDYEF
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagatcatggacatggagattctcaggtcaattctggatctaaaggaagcgtc
actcacaaacataaagacaagcacaaagacaaggaacacagacacaaagaccacaagaaa
gacaaggagcgagagaaattcaggcacagcaacagtgaacataaggaccactctgagagg
aaacaccgagacaaagagaagctgaagcacagtgacagcagctcagacaagcacagggaa
aaacacaaagagaaagacaaggacaaagagaagaggagagaggagaagatcaaatcatcc
tatgtagacaagcctaaaaaggagaaagaaaatggatatgtaagagatgcaagctctcct
gccattaagagtgagcctgaagaagacaacggcttctacccctctccccaacacaacaag
acctccaaacgagagtatgatgatgaagaatttgaatacaagcccaaaaaagtcaagaca
gaacatgacaaaaaggccaagaagaggaaacatgagtacgaagaggatgaggaagatgag
gacatcaagcccaaaaagaagacaaaagacaaaaatgtaacagagggaaagaaagccaaa
aaagaagaagaggagaagtggaaatggtgggaggaggaaagatatactgatggctccaaa
tggcgcttccttgagcataagggtccagtgtttgcacctccatatgaacccttgcctgac
aaagtcaaatttttctatgatggtaagcctatgaagcttagtgcccctgctgaggaggta
gctacattttttgccaagatgttggatcatgagtacaccactaaggacatcttcaggaag
aacttctttaaggactggaggaaggaaatgacatcagaggagaagtcaaagatcaccgac
ctgaacaagtgcaacttcagtgagatgaatgaatacttcaaggcccaatcagaagctagg
aaacagctgtcaaaagaggagaaacagaaaaacaaagaggagaatgagagactcctccag
gagtacggtttctgcatcatggacaaccacaaggagaggattggaaacttccgcatcgag
ccgccaggcctctttcgaggacgaggcgatcatccgaagatgggcatgctgaaacgacgc
atcagacctgaagacatcattattaactgtagcaaggactccaagcaccctaaacctccc
ccaggaacaaaatggaaggaggttcgtcatgataacaaggtgacctggctggtatcttgg
acggagaacatccagggctccattaagtacatcatgttgaatcctagctccaggatcaag
ggggagaaggactggcagaaatatgagactgctcgacgattgaagaaatgtgtggatcgc
ctccgtacccagtatagagacgactggaagtcaaaagagatgaggatcaggcagagagct
gtggcactgtatttcatagacaagcttgcactgagggctggtaacgaaaaggaggaaggt
gagacggcggacacagttggctgctgctcactgcgggtggagcacatcaaactgtacccc
aagatggacgaccaggagtacgtggtggagtttgacttcttgggaaaggactccatccgc
tactacaacaagatccctgtagagaagagggtctttaaaaaccttcagctgttcctggag
aacaagcagcctgaagatgacctctttgacagactgaatacttctattctgaataagcac
ttacaggagctgatggatggcctgacagccaaggtctttcgtacctacaacgcctccatc
accctgcaacagcagctcaaggaactttcctgctctgatgacagcatcccagctaaaatc
ctgtcatacaaccgagccaaccgggcagtggctatcctctgtaaccaccagagagctcca
cccaaaacatttgagaagtccatgcaaaaccttcagaccaagatcgacgagaaacagaat
caactgtcagcagccaggaagcagctgaaggctgccaaggctgatcacaaggcttcccat
gatgacaaaagcaaaaaggctgtggaggtgaagcgtaaagctgtccagaggatagaggag
cagctgatgaagctccaggtgcaggccacagacagagaggagaacaagcagattgctctg
ggcacctccaagctcaactacctggatccacgcatatctgttgcatggtgcaagaaatgg
ggcgttcccattgagaagatctacaacaaaacccagagagagaagttcgcctgggcaatt
gacatggctgacaaggactatgagttttaa
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