Siniperca chuatsi (mandarin fish): 122882852
Help
Entry
122882852 CDS
T08948
Name
(RefSeq) host cell factor 1-like
KO
K14966
host cell factor 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03083
Polycomb repressive complex
schu04980
Cobalamin transport and metabolism
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122882852
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
122882852
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122882852
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
schu01009
]
122882852
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122882852
03029 Mitochondrial biogenesis [BR:
schu03029
]
122882852
Protein phosphatases and associated proteins [BR:
schu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122882852
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
122882852
HMT complexes
COMPASS/SET1 complex
122882852
MLL-HCF complex
122882852
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
122882852
Mitochondrial biogenesis [BR:
schu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
122882852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
122882852
NCBI-ProteinID:
XP_044066652
LinkDB
All DBs
Position
LG10:31029820..31056520
Genome browser
AA seq
1628 aa
AA seq
DB search
MASEPATPAVLQPRWKRVLGWTGPVPRPRHGHRAVTIKELMVVFGGGNEGIVDELHVYNT
ATNQWFIPAVRGDVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSSDLYELQASRWEWKRLK
AKAPKNGPPPCPRLGHSFSLIGSCCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSSV
VGWEIPLTSGPPPPPRESHTAVVTSGRAANRLIIYGGMSGCRLGDLWVLDIDSLTWSKPT
LSGTAPLPRSLHSATTINNKMYVFGGWIPLVMDDVKVATHEKEWKCTNTLACLNLDTMCW
ETVLMDSVEENVPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLWYLETERPCP
PSRVQLVRANTSSLEVSWGPSQTADTYLLQLQKYDIPATSAAASPASSPAPNLVPKSPAP
IATTPANQTVPLSGITLVPSPTAAAAAAKAPAVLKVAAAPGAAGGASIVTVRQATPKSPV
AVTTLPAGVRMMVPAQAGQGTPIGSSPQMSGMAALAAAAAATQKIPPSTAAMLNVPAGAT
IVKTVAVSPGSSSLPVKVAAPVTMVSNPATRMLKTAAAQVGGASVVSTPGTPSRPIITVH
KSGTVTVSQQAQVVTTVVGGVTKTITLVNSPLSVGGGGALFGNLGNLGNLGNLGKVVSVV
QTKPVQSGAVTGQAGSSPVTQILQTKGALPAGTILKLVTSADGKQTTLLSTAQAGSTPTK
QTILGVAPATSKPGTTIIKTIPMSALHGGAGANSPITILTTKMVTPGSAGKIITTVPKIT
AAGQQGLTQVVLKGAPGTPGTILRTVPMSGVRLVSPGAVGTKPTVTTLVVKATTGMSSLG
TATGSVSTTVAGGAVSTANASLATPITTLATIATLASQVTTATATPTGPKQVTLITTPSG
AEAQPLVQDLPVSIMASPTSEEPGSTTNTTTTTTAGGEAGDTAAATVTLVCSNPPCETHD
TGTTNTATVATATMGGNDRACSNPPCETHDTGTTNTATVATATMGGNDRACSNPPCETHD
TGTTNTATVAPASLSPVLQVSSSQPSAQQSAPPHPVSLNGGNTCSNPPCETHETGTTNTA
TTAGAGGLRQVCSNPPCETHETGTTNTATTATAQQGGDGLQGDSTDPSSSSDPASSTTAS
QSRAVTTVTQATPTPGPSIPEISSLVGEGRAESSEEAVAMVTAAEGEEPMQTDSQSGHVM
SSEASVLQVHVEGSEAAAQMDSGLPQELMSSEGDGGELVSGATTLMVTGLTSDQLAVTTA
TEEAVHQATIQAVLQAAGHIGDASVDQPIPIVLTQQELAALVQQQLQDVHNQAEPAEPEP
QHSSVPTEGLAPADSLNDPTAESNGHELTSSAVTSAVARLASTFGPAPPLTASPAKIQTA
ALAEVTNGIAATAGKQGVQVRSSARDSQWYDVGIVKVTNMVVTHYYVPYDDNMADDDSGA
LPDYSQMRKVELQPGTAYKFRVAGINICGRGAFSEVSAFKTCLPGFPGAPCAIKISKNLD
GAQLTWEPPAVTSGKITEYSVYLAIQSSQATSSGSGSGPAQLAFMRVYCGPNPSCLVQAS
SLANAHIDYTTKPAIIFRIAARNQKGYGPATQVRWLQESSKDAKPAAKRPGASPDFKPVG
PKKFRTDQ
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgaacccgcgacccccgcggtgctacagccccgctggaagcgcgtcctgggc
tggaccggcccggtgccgcggccccggcacggacaccgagccgtgactatcaaagagcta
atggtggtgttcggcggagggaacgaggggatcgtggacgagctgcacgtctacaacaca
gctaccaaccagtggttcatccctgcggtgcgaggtgacgtcccccccggctgcgccgcc
tacggcttcgtgtgcgacgggacgaggctgctggtgttcggggggatggtggagtacggc
aaatacagcagcgacctgtacgagctgcaggcgagtcgctgggagtggaaacgtctgaag
gccaaggctccaaagaatggcccgcccccctgcccccgcctcggacacagcttctctctg
attggcagttgctgctacctgtttggaggactggccaatgacagtgaagaccccaagaac
aacatccccaggtatctaaacgacctgtactgtctcgagctgcggccgggctccagcgtg
gtcggctgggagatcccgctgacttcagggccgccgccgccgcctagagagagtcacact
gccgtggtgacgagcggccgcgcagccaacagactcatcatctacggagggatgagcggc
tgcagactgggagacctgtgggtgctcgacatagactcactgacgtggagtaaaccgacg
ctcagtggaaccgcccccctcccccgcagcctgcactcggccaccaccatcaacaacaag
atgtatgtgtttggaggttggattcctctggtgatggatgacgtcaaagtggcgactcat
gagaaggagtggaagtgcaccaacacactggcctgcctcaacctggacacgatgtgttgg
gagacggtcctgatggacagtgtcgaggagaacgtccccagagctcgagcaggtcactgc
agcgtcgccatcaactccagactctacatctggagcggcagagacggatacaggaaggcc
tggaacaaccaggtgtgctgcaaggacctctggtacctggagacagagcgtccctgccct
ccctctcgggtgcagctggtccgggccaacacgtcgtctctggaggtgagctgggggccg
tcgcagaccgccgacacctacctgctgcagctgcagaagtacgacattcccgccacatct
gcagccgcctcacctgcctctagccctgcccccaaccttgtccccaagagccccgcccct
atcgccacgacaccggctaaccaaactgtcccgctgtccggcatcacactggtcccctcc
cccactgcggctgctgctgctgctaaagcaccagctgtcctgaaggtggcggcagctcca
ggtgcagcaggcggagcctccatcgtcaccgtgagacaggccactcccaaatccccggtc
gctgtgacgacgcttcctgcaggtgttcgtatgatggtacctgcgcaggccggtcagggg
acgccaataggaagcagtcctcagatgagcggcatggcggcgttggcggcggcggcggca
gcgactcagaagatccctccgtccacagcggcgatgctgaacgtccctgcaggagcaaca
attgtaaagacagtggctgtgagtccaggatccagcagtctgccagtcaaggtggccgct
ccagttacaatggtgagtaacccagccactcgcatgctgaagactgctgctgctcaggtg
ggcggagcctctgtagtctccacccccgggacccccagccgaccaatcatcacggtccat
aagtccggcacggtgacggtctcccagcaggctcaggtggtcaccacggtggtgggcgga
gtcacaaagaccatcactctcgttaacagtccactcagtgtgggaggaggcggagctctg
tttggtaacctgggtaaccttggtaaccttggtaacctggggaaggtggtgtcagtggtt
cagaccaaaccagttcagagtggagcagttactggtcaggctgggagcagcccagtcacc
cagatcctccagacgaagggcgctctcccggcaggaaccatcttgaagttggtgacgtca
gcagatggtaaacagaccaccctcctcagcaccgcgcaggccggatccacaccaaccaaa
cagaccatcctgggcgttgccccggcaacctccaaacctggcaccacaatcatcaagacc
atcccaatgtcggcgctacatgggggggcaggtgctaacagtccaatcacgatcctgacc
accaagatggtgacaccaggaagtgctggaaaaatcatcaccaccgtccccaaaatcact
gcagctggacagcaggggctcacacaggtggtgttgaaaggagctccggggacgcctggt
acgatcctcaggaccgtcccaatgagcggagtcagactggtgtcaccgggagctgtcggc
accaaacccaccgtcaccacactggtcgtcaaagcaaccacaggtatgtccagtctgggg
acagcaacaggaagcgtctccaccacggtggcaggaggagctgtctccactgccaacgcc
tccctggcaacgcccatcaccaccctggcaaccatcgccacgctagccagccaggttacc
acagcaaccgccacccccacaggacccaaacaggtgactctgatcacgactcccagcggt
gcagaggctcagccgctggtccaggatctgcccgtctccattatggcttctcctacttca
gaagaacctggaagtactacaaatactactactactactactgcagggggagaggctgga
gacactgcagctgctacagtgacgttggtctgctccaacccgccctgtgagacccacgac
accggcaccaccaacaccgccacagtcgccacggcaaccatgggtggtaatgacagagcg
tgctccaacccgccctgtgagacccacgacaccggcaccaccaacaccgccacagtcgcc
acggcaaccatgggtggtaatgacagagcgtgctccaacccgccctgtgagacccacgac
accggcaccaccaacaccgccaccgtggcccccgccagcctgagcccggtgctgcaggtg
agctccagccagccttcagctcagcagtctgctcctccacatcctgtcagtctgaacgga
gggaacacctgctccaacccgccatgtgagacccacgagacaggaaccaccaacaccgct
accacagcaggagctggaggactcagacaggtgtgttccaacccgccatgtgagacccac
gagacaggaaccaccaacaccgctaccacagcgacagctcagcagggtggagacggtctg
cagggagactccacagacccctcctcctcctctgaccccgcctcctccaccacagccagt
cagagcagagctgtcaccacggttacacaggccacacccacacctgggccatccatacct
gagatctcttcattggtcggagagggcagggcggagtcctctgaggaggctgttgccatg
gtgaccgcagcagagggggaggagcctatgcagacggacagccaatcagggcatgtgatg
tcatcagaagcctcagtgttacaggttcatgtggagggcagcgaggcggcagcacagatg
gacagcggtcttcctcaggagctgatgtcatctgagggggacggaggtgagctggtctcc
ggggcgacgaccctgatggtgacgggactgacctcggatcagctggctgttaccacggca
acagaggaggcagttcaccaggcgacaatacaggcggtcctgcaggcagcaggacacatc
ggagacgcgtcggtggaccagcccatccccatcgttctgacccagcaggagctggcagct
ctggtccagcagcagctgcaggacgtccacaaccaagcagaaccagcagaaccagaaccg
cagcacagcagcgtgcccacagagggccttgctccagcagacagcctgaatgacccgacg
gcagagagcaacggacacgagctgacatcatcggcagtgacgagcgccgtggcccgattg
gccagtacgtttggccccgcccctcctctgacggccagcccggctaagattcaaactgct
gcgctcgccgaggtgaccaatggcatagcagcaactgccgggaagcagggcgtccaggtg
aggtcatcagcgagggacagtcagtggtacgacgtcggcatcgtcaaagtgaccaacatg
gtggtcactcattactacgtcccctacgacgacaacatggccgacgatgactcgggtgcg
ctgccagactacagtcagatgagaaaggtggagctgcagccggggaccgcctataagttt
cgggtcgccgggatcaatatctgcgggcgcggtgcgttctcggaggtgtcggcgtttaaa
acgtgtcttcccggtttccccggagcgccctgcgccatcaagatcagcaagaacctggac
ggggctcagctcacctgggagcctcctgccgtcacatcggggaagatcacggagtactct
gtgtacctggccatccagtccagccaggccacctcctctggttcaggttccggcccggcc
cagctggccttcatgagggtctactgcggtcccaacccgtcctgcctggtccaggcctcc
agcctcgccaacgcccacatcgactacaccaccaagcctgccatcatcttccgcatcgcc
gctcgcaaccagaagggctacgggccggccacgcaggtccggtggctacaagaaagcagt
aaagacgccaaaccagcagcgaagagaccaggagcttctcctgattttaaacctgtcgga
ccaaagaagttcagaaccgaccaatag
DBGET
integrated database retrieval system