Siniperca chuatsi (mandarin fish): 122882919
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Entry
122882919 CDS
T08948
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04010
MAPK signaling pathway
schu04020
Calcium signaling pathway
schu04260
Cardiac muscle contraction
schu04261
Adrenergic signaling in cardiomyocytes
schu04270
Vascular smooth muscle contraction
schu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122882919
04020 Calcium signaling pathway
122882919
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
122882919
09153 Circulatory system
04260 Cardiac muscle contraction
122882919
04261 Adrenergic signaling in cardiomyocytes
122882919
04270 Vascular smooth muscle contraction
122882919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122882919
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122882919
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
LYRIC
GvpK
Motif
Other DBs
NCBI-GeneID:
122882919
NCBI-ProteinID:
XP_044066813
LinkDB
All DBs
Position
LG10:complement(16189644..16211935)
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AA seq
1851 aa
AA seq
DB search
MAANGEAAKPVIMNEEELKRKQREKLKKLQATGGNPRPARSLFLFTLKNPFRKACINIVE
WKTFEIIILLTIFANCIALAVFLPMPEEDSNNTNSSLESLEYIFLIIFTLECFLKIVAYG
LVFHEGAYLRNCWNILDFVIVFMGLFTFALDTINKIAGVPMEKGGGFDMKALRAFRVLRP
LRLVSGVPSLQVVMNSILKAMLPLLHIALLVFLLVTIYAIMGLELFKCKMHKTCYYTGTN
IYATAEGELPAPCAQAGNGRRCNINGSECRPGWEGPNNGITHFDNIGFAMLTVYQCITME
GWTKVLYWINDAIGNEWPWVYFVPLILLGSFFVLNLVLGVLSGEFTKEREKARSRGEFQK
LRERQQLDEDLHGYMEWITHAEVLDADREGKGLLPLTSGDSDTDSLYDLEGKSRIVYYYR
LARRWNRFFRMKCLVYVKTKGFYWIVMFLVLLNTLTIATEHHHQPNWLTSLQDVASRVLL
VLFVIEMFVKMYGLGPRGYFMSLFNRFDFFVVLCGILEMIMFSAGAVAPLGFSVLRCIRL
LRILKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFSDHRP
RRSNFDNFPQALISVFQILTGEDWTSIMYNGIMAYGGPVFPGILVAIYFIVLFVCGNYIL
LNVFLAIAVDNLAEAESLTSAQKEKAEEKLRRKLRRSKMPDKTDEERERLAKKLAEQRAK
MEGMPTTAKLKIDEFESNVNEVKDPFPPDDFPGDDEEEEPEIPISPRPRPMADLQLKEEA
VPLPEASSFFIFGPQNKFRKLCYKIINASSFTNLILLFILLSSISLAAEDPIDPQSFRNK
ILAYADIVFTTVFTIEIVLKMTVYGAFMHKGSFCRNSFNILDLIVVGVSLLSMGMESSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLNFMFACIGVQLF
KGKFYSCTDSSKMTGEECQGFFLKHMENSLQDTVLAKREWLNSDFNFDNVLYGMLALFTV
STFEGWPKLLYRAIDSDEEDMGPVFNNRVDVSIFFIIYIILIAFFMMNIFVGFVIVTFQE
QGEQEYKDCELDKNQRQCVQYALKARPLRCYIPKNPYQYRVWYIVTSCYFEYLMFFLIML
NTLCLGMQHCNQSDHVTKLSDTLNLIFTVLFTVEMILKLMAFKARGYFGDPWNVFDFIIV
IGSVVDVILSEVDTALASSGGLYCLHGCAETNPMQAIAASENASVSITFFRLFRVMRLVK
LLNRSEGIRNLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQIFGKVSLVDGTQINRNNN
FQTFPQAVLMLFRCATGEAWQEVMMASMYGKKCDPKSDFLPGEEYTCGSNFAVFYFLSFY
CLCAFLILNLFVAVIMDNFDYLTRDWSLLGPHHLDEFKKIWAEYDPEATGRIKHLDVVTL
LRRIQPPLGFGKFCPHRAACKRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQ
ANEELRAIIKQIWKRTSMKLLDQVIPPIGDDEVTVGKFYSTFLLQDHFRKFLKRQEEYYG
YRPTKKSASGPEIQAGLRSIDEEVAPEMHRAISGDLQNEEEIDRAMEEAGEEGIYQRTHG
LFGNRVDSFSSEPANTQSQQMTSQRPLQFSESLPESPPNSSALVPTTEFFPTTAPKSNTN
NNAFAEFSFERDGSPVEFYDPSEDAEPDNLRSWNFTVRTDKTQFPYDPNYGDSQSQSSCT
AADQLVQEALVKGGLASLAKDPDFVSVTKKEMADAMHTTVDDMESVAQGILSERSGSITS
GKKRRPIPVPPPAAAVAAQGTGQPDPAVRRKRCPIPTIPSVQELAEADSKV
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaacggagaggcggccaagccggtcatcatgaatgaagaggagctgaagagg
aagcagagggagaagctgaagaagctacaggccacggggggaaaccctcgaccagcgaga
tccctcttcctcttcaccctcaaaaatcccttccgcaaggcctgcatcaacattgtggag
tggaaaacctttgagatcatcatcttattgaccatctttgcaaactgtatcgctttggct
gtgttccttcccatgcctgaagaagacagtaataacaccaactcaagcttggagagtttg
gagtatatcttcctgatcatattcacgttagagtgctttctgaagatagtggcgtatggg
ctcgtgttccatgaaggcgcctatttacggaactgttggaacatattggactttgtcatc
gtcttcatgggtctcttcacctttgccttggataccatcaataagatagcaggtgtgcca
atggagaagggcggagggtttgacatgaaggcgctaagagccttcagagtgctgcggccc
ttacgtcttgtctctggagtccccagcctgcaggtggtgatgaactccatcctcaaagcc
atgctgcctctgctgcacatcgccctgctggtctttctactggtcactatctatgccatc
atgggactggagctcttcaagtgcaaaatgcacaagacctgctattacactggcacaaat
atctacgccacagcagaaggtgagctgcctgcaccctgtgctcaggctggtaacggacgc
cgctgtaacatcaatggctctgagtgtcggccaggctgggaaggtcccaacaatggcatc
acccactttgataacattggctttgccatgcttacagtctaccagtgtatcaccatggag
ggatggaccaaagttctctactggattaatgatgccataggaaatgaatggccctgggtc
tactttgttcccctcattctcctgggctccttctttgtgctcaatctggttttgggcgtg
ctcagtggggagtttaccaaagagcgagagaaggctaggtcacgtggagagttccagaag
ttgcgagagcgtcagcagctggatgaagacctgcatggctacatggagtggatcactcac
gctgaagtcctggatgccgaccgagagggcaaaggactccttcctttaaccagcggagat
tctgacacagacagcctgtacgacctggaaggcaagagtcgaatcgtctactactaccga
ctggctcgtcgctggaaccgtttcttcaggatgaagtgcctggtgtatgtcaaaaccaag
ggcttttactggatagtgatgtttctcgtcttactcaacaccctgaccatagcaacagag
caccaccaccagcctaactggctcacttccctacaagacgtggccagtcgtgtactgctg
gtgctgtttgtcatagagatgtttgtgaagatgtatggtctgggtcccagaggatatttc
atgtccctgtttaaccgttttgacttttttgtggtgctatgcggtatcctggagatgatc
atgttctctgcgggagccgtggctcctctgggtttctctgtactcaggtgtatccgactg
ctgaggatccttaaagtcacaaagtactggacctctttgagtaatcttgtggcctctctc
ctcaactctgtacgctccatcgcctccctgctccttcttctcttcctcttcatcgtcatt
ttctcactcctgggcatgcaggtgtttggggggaaattcaacttttccgaccacagaccc
agacgcagtaactttgacaacttccctcaggccctcatcagtgtgtttcagatcctaaca
ggagaggactggacctccatcatgtacaatggtattatggcctacggagggcctgtcttt
cctggcatcctggttgccatctactttatcgtcctctttgtctgtggaaactatatcctc
ctcaatgtcttcttggccatcgccgtcgacaacctggcagaggctgagagtttaacttca
gctcagaaagaaaaggcagaggagaagttgaggagaaagctacgaaggtccaaaatgcct
gacaagactgatgaggagagggagaggttagctaagaaactggcagagcagagagctaag
atggagggcatgcccaccacagccaagctcaaaattgacgagtttgagtccaatgtcaat
gaagtgaaagatccattcccacctgacgacttccccggtgatgacgaggaggaagagcct
gaaatccccatcagccctcgtccccgaccaatggccgacctgcagctgaaggaggaagct
gttccactgcctgaagccagctccttttttatttttggccctcagaacaagttccgtaaa
ctgtgctacaagatcatcaacgcctcgtccttcaccaacttaattcttctgttcatcctg
ctctcctccatctccctggcagctgaggaccccattgatccccagtccttcagaaacaag
atcttggcctatgctgacattgtcttcacaactgtgttcaccattgagattgtactaaag
atgacagtgtatggagcatttatgcacaagggctccttctgccgtaactccttcaacatc
ctggatctcattgtggttggagtctcccttctttccatgggaatggaatccagtgctatc
tctgtggtgaagattctcagggttctgagggtgctgaggcctctcagggccatcaataga
gccaaggggttaaagcatgtggtccagtgcgtgtttgtggccatcaaaaccattggcaac
atcgtcctggtcaccatgctgctgaatttcatgtttgcctgtattggagtgcaactcttc
aagggtaaattctacagctgcacagactcgtccaaaatgactggggaggaatgccaggga
ttcttcttgaagcacatggagaattccctacaggacacagtgttggctaagagagaatgg
ctcaacagtgacttcaactttgacaatgtgctctatggcatgctggctctctttactgtt
tccacatttgagggctggccaaaactgttatacagagccattgattcagacgaagaagac
atgggtcctgtcttcaacaatcgcgtggatgtgtccatcttcttcatcatctacatcatc
ctcatcgccttcttcatgatgaacatctttgtgggcttcgtcatcgtcactttccaggag
cagggcgagcaggagtataaggactgcgagctggataagaaccagcgtcagtgtgtgcag
tacgccctgaaggctcgtcctctgaggtgctacatccctaaaaacccctaccagtacagg
gtctggtacattgtcacctcctgctactttgagtacctcatgttcttcctaattatgctc
aacacgttatgtctggggatgcagcactgcaaccaatcggaccatgtgaccaagctgtcg
gacactctgaacttgatcttcaccgtgctcttcactgtggagatgattctcaagctcatg
gccttcaaagcgagaggctactttggagacccctggaacgtttttgacttcattatcgtc
atcggtagcgtcgttgatgtcatcctgagtgaagtcgatactgccctggcctccagtgga
ggactgtactgtctccatggctgtgctgagacaaatcctatgcaagcaattgcggcgtct
gaaaatgcttcagtttccatcacgttcttccgactcttccgtgtcatgcgtctggtcaag
ctgctgaaccgttcggaggggatccgaaacctgctgtggaccttcatcaagtccttccag
gctctccctcacgtagctctgctcatcgtgatgctgttctttatctatgctgtcatcggg
atgcagatctttggaaaggtgtccttagtggatggcacccaaatcaaccgcaacaacaac
ttccagacattccctcaggctgttctgatgttattccgatgtgctactggagaggcttgg
caggaggtcatgatggcttcgatgtatgggaagaagtgcgaccccaagtctgacttcctg
ccaggagaggagtacacctgcgggtccaacttcgctgtcttctacttcctcagcttctac
tgtctctgtgctttcctgatcctcaacctgtttgtagctgtcatcatggacaactttgac
tacctgacccgtgattggtctcttcttggcccacaccatctagatgagtttaagaagatc
tgggctgaatatgaccctgaagccacggggagaattaaacatctggacgtggtgacgctg
ctgcgacgcatccagcctccactgggttttggcaaattctgccctcatcgtgctgcatgc
aagcgtttggttggcatgaacatgcctctcaacagtgatggcaccgtcaccttcaatgcc
accctgtttgctctggtcaggactgcactcaagatcaaaacagaaggtaactttgagcag
gccaatgaggagctgagagccattataaagcaaatctggaaacgcaccagtatgaaactg
ttggaccaggtcattccccctataggagatgatgaggtgactgtggggaaattctactcc
accttcctgcttcaggaccatttccgtaagttcttaaagcgtcaggaggagtactatggc
taccggcccactaagaagagcgcctcgggcccagagatccaggcgggcctgaggagtata
gatgaagaggtggctccagagatgcacagagccatttcaggagacctacagaatgaggaa
gagatagacagagctatggaggaggctggagaagaaggcatttaccagcgtacacatggt
ctgtttggtaaccgggtggactcattctcctctgagcccgccaacactcagtcccagcag
atgaccagccagcggcccctccagttctctgagagcctgcctgagtctccaccaaactcc
tctgccttggtgcccactaccgaatttttccccactaccgcaccaaaaagcaacactaac
aacaacgccttcgcagaattttcattcgaaagagacggcagtcccgtagagttttacgat
cccagcgaggatgcagagccagacaacctgcgctcctggaacttcacagtgagaacagac
aaaacgcagttcccttatgaccctaactatggcgacagtcagagtcagagctcctgtact
gcggctgaccagctcgtccaggaggctcttgtaaagggtggtctggcctccctggccaaa
gaccccgactttgtctctgtgactaagaaggagatggctgatgccatgcacacaactgta
gatgacatggagagcgtggctcagggcatcctcagcgaacgctctggcagcatcacctct
ggcaaaaagagacgtcccatccccgtccctcctcctgccgctgctgtggcagcacaggga
acgggccagccagatccagctgtgaggagaaagagatgtccgatccccacgattccctcc
gtacaggagctggctgaggctgactccaaagtttaa
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integrated database retrieval system
