Siniperca chuatsi (mandarin fish): 122882934
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Entry
122882934 CDS
T08948
Name
(RefSeq) NFX1-type zinc finger-containing protein 1-like isoform X1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122882934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
DEAD
SLFN-g3_helicase
PhoH
AAA_25
AAA_22
nSTAND3
AAA
Motif
Other DBs
NCBI-GeneID:
122882934
NCBI-ProteinID:
XP_044066848
LinkDB
All DBs
Position
LG2:complement(11537778..11554684)
Genome browser
AA seq
1991 aa
AA seq
DB search
MERLTLLTGRRGPINGTDTGQNENASGGRGRRRGGAQGAEARGTEGRRRAQSHGRNQAER
EETDGGVGRGGGGMRGRGRGRGGGGADPGRGGERGAGREGRDETDGGGGGEGVRGRGRGR
GGAADAGRGGERGAGRQWGGARQRGGGRGRGGNGGEGAERGGARRNGEQGAAEREGERRG
GGRGGERRDGVGDRQGRNGGRSNSTGRVGTPQGHGLGYKTMEELSGKDPSVVAITLSCNP
ALQDVLSGTTMRQDLVELLCLVLSKAFKSRTDRGTLQHLAGIIKDSGFFRTILPHYLVGM
ESEFNLVRRAQYPRHLENILAILSEVLSIFPASSVQAVSLLLTLLQASINSLRASGVDIQ
PQMEESVESVQGLIRHLQEKSREGTLRSDRDTYALLPTGRDNPGEEEQQDFRTIPIYPTR
EEFHQDHRPFLRPNLTSQRYTNTHLYLDTHFRLLREDFVRPLREGIQQLLRNQMGREGGR
SDNSLKTKRFDDIRVYFDTKLVVPKCTPTGLAYIVQFDIQPLKFVRWQNSKRLIYGSLVC
LSCDNFESFLFATVSDRDPNSLQRGQVQITFTEESRFKLARIQKGQLFLMIETTAYFEAY
RYVLEGLQEQEEDSMPFQRYIVECSTDVQPPAYLQRRDIYDLSSIADPDYKDSIRPFHSL
EEEAWPRMEELGLDESQMRAFQLALTKELTIIQGPPGTGKTYVGLKIAQALLTNQDLWRD
RFGTAPMLVVCYTNHALDQFLEGIHTFLQEGIVRVGGRSNSEILKRFNLRELTHSHDFRR
TLPSHLRYAYSEIYKQLCQEERGIQSQSMRLECSLKGVLRESFLEKFISDIHWDSLHLPP
TQDGFETWSEKKSSLIMEWLGLGSTVFLQRETENANRNEDIAAAEAMELEEEDLIEIAEE
ADLLQAERIIEDNIGPRGGRDGRKKGDMEEAVRAVEELMLAMNLDKAEIQAEQSEEGWEM
QRDQKRKKKNRIRKELGKSSAMTDKEEDAVLDIWTLSLPDRWRLYRLWVARYRVELCTRV
LESEQAYQNAVDRLADVKRQENLCLLKEATVIGMTTTGAAKFRKVLQEVRPRLVIVEEAA
EVLEAHTITTLSEACQHLILIGDHQQLRPSATVYELAKNFHLEMSMFERLVKMGLPYVRL
NYQHRMRPDIACLLTPHIYSELENHPSVLDYENIKGINTNLFFVEHNYPEEEIKDGRSHQ
NRHEAMFVVALCRYLLFQDYKPEQITILTTYTGQLHCLRKLMPASQFTGVKVHVVDKYQG
EENDIVLLSLVRSNLQGKVGFLNIPNRVCVALSRAKKGLYCIGNSAMLGQVKLWSNIFYT
LRQKDQVGNALTLCCQNHPNRQLKVSNVDDFKQAPEGGCTQPCEFRLDCGHVCSRVCHPY
DPEHKEYKCGKKCQKILCDRGHRCTLVCHKACPEKCPVKVEKIIPQCLHTQMVPCHQDPN
KFVCQEPCQKLLHCGHPCDSLCGEPCTSKCKVKVTLKLRCGHSQQDACFYKTQKEEPECR
TPCEHQLKCGHACGGNCGKCYQGRFHFPCLHQCERLLICSHKCREPCTRDCPPCQRPCEN
CCVHSKCMKPCGQPCALCIEPCAWQCPHQSCNKLCYEPCDRLPCTQPCAKTLDCGHPCIG
LCGDKCPSKCRICNYDEVTEIFFGTEDEPDAYFIQLEDCGHIIEYTAMDTYMGMDDSQQA
NEGEQVAIKLKECPKCRTPIRKNLRYGSHINSSLAEIEMVKAKINGHQADIEEHRKALQK
QWKDNLHTYEMHQQKEYMHINDRLGKTYLTANDLWVLENKIDFLVRVAKLRKIQRENMSF
RQSFRLEKYFEEFVRWLNNSHQKFTDQQVFDLQRELPRLTLLTELNARCHMADKRRQSDK
FQSEVQTITAILEKSGQFTEQDQRRVKEAMKELDNKLPLPGLGISEEERKMIVSAVKMPL
GHWHKCPNGHVYLITECGGAMESRRCPDCDATIGGGSHRLASGNQVASEMDGAQHPAWSE
TNNLLNFEQFD
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggaaagactgactttattaacagggagaagaggacctattaatggtactgatactggc
caaaatgaaaatgctagtggaggcagagggagaagacgaggaggtgcacagggggccgag
gcgagaggaacagagggcagaagaagagcacaaagtcatgggagaaatcaagctgaaagg
gaggagacagatggaggagtaggaagaggaggtggagggatgcgtgggagaggcagagga
agaggaggaggaggagcagacccaggaagagggggtgaaagaggtgcaggaagagaaggc
agggacgagacagatgggggaggaggaggtgaaggtgtgcgaggcagaggaagaggaaga
ggaggagcagcagacgcagggagagggggcgaaagaggtgcaggaagacagtggggagga
gccagacagagaggaggagggagggggagaggtggaaatggaggagaaggagcagagaga
ggtggtgcaagaagaaatggagagcaaggtgcagctgaaagagaaggagagagaagggga
ggaggtagagggggtgagagaagagatggtgtaggagacagacaggggaggaatggaggg
agatcaaattctacaggcagagtcggaacaccacagggccatggactgggctataaaaca
atggaagaactctctggaaaagacccgtctgtagtggccatcaccctgtcctgtaaccct
gccctacaagatgtcctgagtgggacaacaatgaggcaggaccttgtcgaactcctctgc
ctggtgctgagtaaagccttcaaatcacggacagacagaggcaccctacagcacttggct
ggcatcataaaagactcagggttcttccgcaccatccttccccactatctggtgggcatg
gagtcagagttcaatctcgtccgcagggcacaatacccacgacatctggaaaacatcctg
gctattctgtcagaggtcctcagcatcttccctgctagctctgtccaggcagtgagtttg
ctgctgacgctgctccaagcctccatcaacagcctgagggcatctggagtggacatccag
cctcaaatggaggagagtgtggagagtgttcagggcctgatcaggcacctccaggagaaa
tccagggagggtaccctgcgctcagacagggacacttatgccctcctacccactggacgt
gataacccaggtgaagaagagcagcaagatttcaggaccatacccatctacccaactcgt
gaggagttccatcaggaccacaggcccttccttagacccaacctcacctctcagcgctac
acaaacacccatctctaccttgacacgcacttccggctgctgagagaggactttgtgcgg
ccactccgtgaggggatccagcaattgcttcggaaccaaatgggaagagaaggaggaagg
agtgataattcactgaagacgaagcgctttgatgatatcagagtatattttgacacaaaa
ctggtggtacccaagtgcacgccgactggactcgcctacatagtccagtttgacattcag
ccacttaagtttgtgcgctggcagaactccaagaggctgatctatggttccctggtctgc
ctgtcgtgtgataattttgagagcttcttgtttgccacagtgtcagatcgggatcccaat
agcctgcagagaggacaggtccagattacctttactgaagaaagcagattcaagttggcc
agaattcagaaaggtcaattattcctgatgattgagaccactgcctactttgaggcctat
cggtatgttctagagggcctacaggagcaggaggaggacagcatgccctttcagaggtac
atcgtggagtgcagcacagatgtgcaacccccagcttatctgcaaagaagagatatctat
gacctgtcatccattgctgaccctgactataaggacagtatacggccctttcacagcctg
gaggaagaggcctggccgagaatggaggagctggggctggatgagtcccagatgagagcc
ttccagctggccctcacgaaggagctgaccatcatacaggggcctcctggcactggaaaa
acctacgttggccttaagattgctcaggctctgttgaccaatcaggatctttggagagac
agatttggtacggctccgatgctggtagtgtgttacactaaccatgccctggatcagttc
cttgagggtattcatacatttctgcaagagggcatagtgagagtaggaggccgcagcaac
agtgagatcctgaagcgtttcaatctaagggagctgactcactcacatgacttcagacgt
acgctgccgtctcacctgcgatacgcatatagtgagatttacaagcagctgtgtcaggag
gagaggggcattcagagtcagagtatgaggctggagtgttctctgaaaggcgtcctgcga
gaaagcttcttagagaagttcatttcagacatacactgggacagtctgcacctaccacct
acacaggatggttttgagacctggagtgagaagaagtccagtctgataatggagtggttg
ggtttgggttccaccgtcttcctgcagagggagacagagaatgcaaatagaaatgaagat
atagcagcggcggaagcgatggagctggaagaagaggacctcattgaaatcgcagaggaa
gcagatctgctccaggcagagcggattattgaagacaacattggtcccagaggtggtaga
gatggcagaaagaagggagacatggaggaagctgtcagagcagtagaagaactaatgctg
gctatgaacctggataaagctgaaattcaggctgagcagagcgaggaaggatgggagatg
caacgggaccagaagagaaagaagaagaacagaatcaggaaagagctggggaagagctcg
gctatgactgacaaagaggaagatgctgtcttggatatttggaccctaagccttccagac
agatggagactctatcggttgtgggtggcacgctacagggtagaactttgcaccagagtc
ctagagtctgaacaggcctatcagaatgcagtagacagattggctgatgtaaaacgtcag
gagaacctctgtctcctcaaggaagccacggttattggcatgacaacaacaggggcggcc
aagttccgtaaagttctgcaggaagttcgtccacgtctggtgattgtagaagaggctgca
gaggtgctcgaggcccacaccatcaccacattgagtgaagcatgtcaacacctcatcctc
atcggagaccaccagcagctgcgccccagtgccacagtatatgaacttgctaagaacttc
cacctggagatgtccatgtttgagaggctggtgaagatgggacttccttatgtcagactc
aactaccagcatcgtatgaggccagacattgcctgtcttttgaccccacacatctactca
gagctggaaaaccatccctctgtgttggactatgagaacatcaagggcattaataccaat
ttattctttgtggagcacaactacccagaagaagagatcaaagatgggagaagccatcag
aaccgacatgaggcgatgtttgtagtcgctctttgccgctatcttctctttcaagactac
aaaccagagcaaattactatcctcacgacctataccggccagctccactgtctgcgcaaa
cttatgcctgccagccagttcacaggggtcaaagtgcatgtagtggacaagtaccaggga
gaagagaatgacattgtcttgttgtctctggtccgcagcaacctacagggtaaagttggc
tttttgaacattcccaatcgagtctgtgtagccttgtctcgtgccaagaaaggtctctac
tgtattggcaacagtgcaatgctgggccaagtcaaactgtggagcaacatcttctacacc
ttgaggcagaaggaccaggttgggaatgccctgaccctgtgctgtcagaatcatccaaat
cgacagctaaaagtttcaaatgttgatgatttcaaacaagcccctgaggggggctgcacc
cagccttgcgagttccgtttggattgtggtcatgtttgctcaagagtctgccacccctac
gaccctgagcacaaggagtacaagtgtggcaagaagtgccagaagattttatgtgatcgg
ggacacaggtgcacacttgtgtgccataaagcatgcccagagaaatgtccagtgaaggtt
gagaagatcataccccagtgtctacacacacagatggttccctgccaccaggacccaaat
aaatttgtttgccaggagccttgccagaagctgcttcactgtggacatccatgtgattca
ttgtgtggggaaccatgcaccagtaagtgcaaggtgaaggtcaccttaaaactaaggtgt
ggccacagccagcaagatgcctgtttttacaaaacacagaaagaggagcctgaatgtagg
accccttgtgaacatcagctaaaatgtggccatgcctgtggtggtaactgtggcaagtgt
tatcagggacgattccatttcccatgtttacaccagtgtgagcgtctcctgatttgctct
cacaagtgcagggagccttgcactcgcgattgccccccttgtcagagaccatgtgagaat
tgctgcgtccacagcaagtgtatgaagccatgtggacagccctgtgctctgtgtattgag
ccctgcgcttggcagtgccctcaccaaagctgcaataaactttgctatgagccatgtgat
cgtctgccatgcacccaaccctgcgccaagaccctggattgcggccacccgtgcataggt
ctgtgtggagacaaatgtccaagcaaatgtcgcatctgtaattacgatgaggtcacagag
attttcttcggcactgaggatgaacctgatgcttacttcattcagctagaagactgtgga
cacatcattgaatacacagccatggacacatacatgggcatggatgacagccagcaggca
aatgaaggagagcaggtggccataaaactgaaggaatgtccgaagtgtcgaactccaatc
cgcaagaatctacgctatggatctcacatcaacagcagtctggctgagatagagatggta
aaggcgaagataaatggacatcaggcagatattgaagaacacaggaaggcccttcaaaaa
cagtggaaggataaccttcacacatatgaaatgcatcagcaaaaggaatatatgcatatc
aatgacagactgggaaaaacttatctcacagcaaatgatctgtgggtcctggaaaacaag
atagatttcctagtaagagttgcaaagctgaggaagatccaaagggaaaacatgtcattc
aggcaaagcttcagattagaaaagtattttgaggagtttgtgcgctggctcaacaacagc
caccaaaaattcacagaccagcaggtctttgatttgcagagagagttaccgagactcacc
ctcttgactgaactcaatgcccgttgccatatggcagacaagagaaggcaaagtgacaaa
tttcaatccgaggtacaaacaataacagcgattttggaaaagtctggccaattcactgag
caagatcaacgcagagtgaaagaagccatgaaggaactagacaacaagcttccgctccca
ggcttggggatcagtgaggaggagagaaagatgatcgtctcggctgtgaaaatgccgctt
ggacactggcacaaatgtcctaatggccatgtctatcttataacagagtgtggaggggct
atggagagtcgacgctgccctgactgtgatgctactattggtgggggcagtcacagactg
gcaagtggcaaccaagtcgcctctgagatggatggggcacagcaccctgcttggtctgaa
accaacaaccttctaaactttgaacaatttgactga
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