Siniperca chuatsi (mandarin fish): 122882966
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Entry
122882966 CDS
T08948
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
schu03037
]
122882966 (nphp4)
Cilium and associated proteins [BR:
schu03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
122882966 (nphp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2155
Motif
Other DBs
NCBI-GeneID:
122882966
NCBI-ProteinID:
XP_044066903
LinkDB
All DBs
Position
LG10:4117795..4297693
Genome browser
AA seq
1469 aa
AA seq
DB search
MIPEELTERKRTKAEDISTMEDGWREVFERSRLLPPPSQTVRLAVESHLTQSHGFQLCLS
RLTAAHLPQEMAEGEQDVAYQLRVTLFDRNHQHFFGKTWKSPPQRMKNNKISFNEVLYFH
TSLRLPSMVVVLELVSLSPRPDGSQQALGRGFTVLELFTNRPEARAADGDRRLNLHHGSP
RSLLHPLLKVTVDYSSLLKTIEGAHLDCVIKNHPALVSMMHLLPENVLVSGDENIPGLAA
SPTGDALLRPQLLKMLPLTLNRLTVSLQPSLEKFESQLLQLINADCHNTKQPGPEATLKT
VVIQERRLHVGVHNGWCFLDNPQVVVLEPLASGARGRADSTSKQSTLVKDSLATSEPGRP
QTLGLRSSLELRLTNHRALAIVFQLECVFSAPIGRDTMLSATSTSRAAFLQCLRWGIWCP
FQEPADWKREEIQLVLQGGAKPNPYGVMVYSTEMSAKTQSPAPLSAPGTAQVSEAKDTIT
FRLSSSLERKSSSPKASLRTKQEDVSCQRRSPSSSVQGQKYIPPASPPESPQGPGLSLSQ
LAATSRYPTISHSSSALPWQQSFPSLLHPSPLASAHQLSHVACSGVSNIAHLEVDLQREG
DVSPSAQDEGDQLQELPFTPVHAPVITLGMNVPSSCSVSSRSSLAHLYSAGFPNIVDCSG
QVAEVLDPTEPVPFDPQREETDLLQSNLLVFQFLAFTRIPTAGVGPDWPDNIYFTFQFYR
FPPVKSQQLKLLTGDKVQQKASDPLPCVLASVNNDGTVNSGSPGLQVQFRVDEGFLRPGE
KRWFLRYLALHTMHIDIWDSDSLLLIGSTAIELKYMLRQGKSAVQAHHEVEVLTTDYVGE
DTLLTSADSGQRFSPMTVHTIIRGRLHMRTGNIGCPVDPSRRRAADVMPSHSHIITPRKV
TGGFRGGSLSSRNILQLNARNTAQAHRLEIDGDRVPLFKRGIRADTIMPGERNLNEPDGG
RRKLNCMAAVHQREGKKDDEAAKATDRTKEAWFTKDLHEIKPSEERRKAEGIANMLSQAI
TTQHLLYASLGSAEYMEFVLKNPFNVPQTVTIHSDDPELSVITNTEEWRYFKALTKTQTP
LEENMFHLEEGTPGPRVYLRPKESIHIPLKYQSFLCDNTMAPQGPSFLPTGKGSQVAKKN
LSNIVAAKTIKVTFKAEDGKPMAICQVNVEPTPHVVDQTFRLYHPELCFLKKAIRLPPWH
DPTVGDLDARTHIPVRCSNPNIICQTRMLVPGEPQDVYLKVPGSPSPHIKMFFVMVFTDK
WMAAPSQIWQIYVHFLERVDVSCVTGQRSCQSLVLRGKQAVRKVKCFSSHPQEIEVDPEG
VFVLPPAAVQELQLKVQPWRAGSRFLYVNAVDVEHRQLVTAWLLCLNVRRPILSKAFEVC
VPVGGGRGSSRKITYTNPYTSSRTFLLRSDHPDLLQFKEDTFQISGGESYTIGLRFAPSQ
SPGSVEILVYVNNLEEKTEETFCVKVNYS
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgaggagttaacagagaggaagaggactaaagcagaagacatatccaccatg
gaggacggctggagagaagtgtttgagagaagccggttgcttcccccgcccagccagaca
gtccgcctggctgtggaaagccacctcacccagtcccacggcttccagctctgcctcagc
cggctcactgcggctcacctcccgcaggagatggcagagggggaacaagatgttgcctac
cagctgcgagtgaccctgtttgatagaaatcaccagcacttctttgggaaaacatggaag
agcccaccccagagaatgaaaaacaacaagatctccttcaatgaggtcctgtacttccat
acgtctctgcggttgcccagcatggtggtggttctggagctggtgtccttgtcacccagg
ccagatggctcccagcaggccctggggcgaggcttcactgtcctggagctttttaccaac
aggccagaggctcgggctgctgatggggacagaaggctgaatctacaccatggatcacca
agaagcctcctccatcctctgctgaaggtcactgttgactacagcagtctcctgaagact
attgaaggagcacatttggactgtgtaataaaaaatcaccctgcactggtttccatgatg
cacctccttccagagaatgtccttgtatctggagatgagaacattccagggcttgcagct
tctccaacaggagatgctctgctgaggcctcagctgctcaagatgctgcccctcaccctg
aacagactgaccgtctccctccagccgtccctggagaagtttgagagccagctgctgcag
ctgatcaatgctgactgccataacacaaaacagcctggaccagaggctacattgaagacg
gttgtcatccaggaaaggaggctccatgttggggtccacaatggctggtgtttcctcgac
aatccccaagtggtggtgctggagcccttagcctcaggggccagaggccgagcagacagc
acgtccaaacagagcacgctggtcaaggacagcttggcaacatcagaacctgggagacct
cagacgttgggccttcgcagcagcttggagctcaggctgaccaatcatcgagctttggca
attgtcttccagctggagtgtgtcttctctgctccaattggccgagacacaatgctgtct
gccacctctacatcccgagcagccttcttgcagtgccttcgttgggggatttggtgcccc
tttcaggagccagctgactggaagcgggaagagatacagcttgttctgcaaggaggtgca
aagccaaacccttatggagtcatggtctacagcacagagatgtctgccaaaactcagagc
cctgcgccactctcagctccaggcacagctcaggtctcggaggcgaaggatacgataacg
tttcggctgtcgtccagtctggagaggaagtcatctagcccaaaggcatctctgaggaca
aagcaggaggatgtgtcatgtcagagaagatcaccttcatcatctgtacagggtcaaaaa
tacattccaccagcttctcctccagaatctcctcaaggccccgggctctcactgtctcag
ctggcagctacttcacgctacccgaccatcagccactccagctcagcgttgccatggcaa
cagtcgtttccttctctgctccatccttccccgttggcatcggcccaccagctgtcacat
gtcgcctgctcaggtgtcagcaacatcgcccacctggaagtggaccttcagcgggaaggg
gatgtgtcaccttcagctcaggacgaaggagaccaacttcaggagctgccctttactcct
gtccatgcccctgtcatcaccctggggatgaatgtgccaagttcctgctcagtcagctcc
aggagctcattggcccacctctactctgctggctttcccaatattgtggactgcagtggg
caggtggcggaagtcctggacccaacagagcctgtgccctttgacccccagcgtgaagag
actgaccttctacagagcaacctgctggtgttccagtttctggcgtttaccaggatacca
acggcgggtgtcggccctgattggcctgacaacatctacttcacgttccagttctatcgc
tttccaccagtcaaatcgcagcagctcaaactactgaccggtgacaaggttcaacagaaa
gctagcgatccacttccctgtgtcctggcctccgtcaacaatgacggcactgtcaactct
ggctctccgggcctgcaggtgcagttcagagtagatgagggtttcctgaggccaggagag
aagcgctggtttctgcgctacctggccctccacaccatgcacatcgacatctgggacagc
gactcattgctcctgataggttctactgccattgagctcaagtatatgttgcgtcagggt
aaatcggcggtgcaggcccatcatgaggtggaggtgctgaccaccgattatgtgggagag
gacaccctgctgacgagcgcagattcgggccaacggttcagccccatgacggtccacact
attataaggggccggctgcacatgcgcacaggcaacatagggtgcccagtagatcctagc
aggaggagggcagcagacgtgatgccgtctcattctcacatcatcacacctcgcaaagtc
acaggtggcttcagaggaggaagcctgtcctccagaaacatactccaactcaatgcgagg
aacactgcgcaagcacacagactggagatagatggagatcgcgtgccattgttcaaacgc
gggatcagagctgacacaatcatgcccggggagcgcaacctaaacgagcccgacggtggg
cgccgcaagctcaactgcatggctgctgtgcatcagcgggagggcaagaaagatgatgaa
gcggctaaggccacggatcggactaaggaagcctggtttaccaaagaccttcatgagatc
aaacccagcgaagagcgcagaaaggcagagggcattgccaacatgttgagccaggccatc
accacccagcacctgctctacgccagcctgggctctgctgagtacatggagtttgtcctt
aaaaatccctttaatgtacctcagaccgtcaccattcacagtgatgaccctgagctcagt
gtcatcactaacacagaggagtggcgttacttcaaagcactaaccaaaactcagaccccg
ctggaggagaacatgttccacttggaggaaggcaccccaggtcccagggtttacctccgg
cccaaggagagcatccatattcctctgaaatatcagagcttcctctgcgacaacaccatg
gcccctcagggaccaagcttcctacctacaggcaaaggttctcaggtggccaagaagaat
ctgtccaatattgttgctgccaagactatcaaggttacattcaaagcagaagacggcaag
ccgatggccatctgccaggtgaacgtagagccgacacctcacgtcgtcgaccagactttc
cggctttaccaccccgagctctgtttccttaagaaagccatccgcctgccaccctggcat
gaccccacagttggagacctagatgccaggactcacattcctgtacgctgcagtaaccct
aacatcatctgccagacaaggatgctggtgccaggggagcctcaggatgtgtacttgaaa
gtgccagggagtcccagtccacacataaaaatgttctttgtgatggtttttactgataag
tggatggcagcgccgtcccagatctggcagatttacgtgcatttcctggagcgggtggat
gtcagctgtgtgactggccagcggagctgtcaatcactggtgctgagggggaagcaggct
gttcgcaaggtcaaatgtttctcatctcacccccaggagattgaggtagacccagagggt
gtgtttgttttgcctcccgcagcagtgcaggagctccagctgaaggtgcaaccatggcga
gcaggcagccgcttcttgtacgtgaacgcggtggatgtggagcaccggcagctagtcact
gcctggctgctctgtctcaacgtccgccggcccatactgtccaaggcatttgaagtgtgt
gtcccagttggtggtgggcgtggcagctcaaggaaaattacctacaccaacccctacacc
agtagccgcacattcctgctccgctctgaccatccagacctgctccagttcaaagaggat
acattccagatcagcgggggagagagttacaccatcggactacgattcgcccccagtcag
agtcccggctcagtggaaatactggtctacgtgaacaacctggaggagaagacggaggag
acgttctgtgtgaaagtcaactactcgtga
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