Siniperca chuatsi (mandarin fish): 122883011
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Entry
122883011 CDS
T08948
Symbol
ccdc187
Name
(RefSeq) coiled-coil domain-containing protein 187 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122883011 (ccdc187)
Membrane trafficking [BR:
schu04131
]
Autophagy
Other autophagy associated proteins
Others
122883011 (ccdc187)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
122883011
NCBI-ProteinID:
XP_044066971
LinkDB
All DBs
Position
LG10:24252688..24271220
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AA seq
818 aa
AA seq
DB search
MSLFKMNLEASHLFTSSMTPSSESSAMCQCFAVLEDGVLAHNLQEQEIEQYYTTNIEKNQ
LVQNDIRVAKRLQDEEEEQQAQQSALLRQASRQLEEQDFEYARVIQEEIQRCAEEAQRRE
KHDEEIAKRMQEEENQRRRRRSRGQEGHSEGSASDPALPSPYQHTLSSLHQGEEQYSSTT
TRWQCSTSHHHSELTEPQADSPRGVAAQKNTASWSNQGHTDSFREIRSELREPLSEDSED
SDTVFSEQLSVLSQRLNERLITAPHRRRASLHQPQERNYRSLCTGNSFTDKLRGWEEESG
EQDEDYYENGDLEKRTPRNWDQERNHKDQDRDSRLVDVRERRCSRSESVSLHDRSIQSNR
DLVRTWSYKDNPDKHVHFQDNTRSSNRQHGERRGVWEMLGQVLRERGVPVRFGGNRAPLQ
IRPQSRESQVLHGSEVSCSDSQPHQRVFQRAASTRHSFHGDIRERRRLSYRENSGRDHRE
DRDRHRKDVEHDGEVYEISSSDSHLANSEKRDSRRWKEHRCTNNDDRERNADDCRVKRKT
SQHRHWHKTTKQRLSSEEEQEVERRVERPHRRAPQRSQSLSSSGASTRDRSRHMAAGTAL
QPEHGEASLDLGELRQVLQDEELAHKLQEEEEQLLRRNSQPSPCSAYPEGDFRVAQVAQD
EEIARFMQKQEIKSKRRSRELEGPASWREHRTMISHHDRQAARDRQGQRERLDSEGLPSP
TEDCSPENQSPSLISTLPQAQQIRNIAEELDPTFQARRQDIESLRVRQTGPTCQSLPMPH
SSLRDLLEEPTFIPPTKRQTDKSGRTKPKEKKENCKQQ
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcttcaaaatgaatctggaggcctcccatttattcacgtcatccatgacacca
tccagcgaatcttcagctatgtgccagtgttttgctgtgctggaggatggagtgttggca
cacaatctgcaggagcaggagattgagcaatactataccaccaacatcgagaagaaccag
ctagtgcagaatgacatccgtgtagccaaaaggcttcaagatgaggaagaggagcagcag
gcccagcagagcgccctcctcagacaggcttccagacaactagaggagcaagactttgag
tatgcccgtgtaattcaagaggagatccagcgttgtgctgaggaggcccagaggagggag
aagcacgatgaggaaatagctaaacgaatgcaggaagaggagaatcagagacgaaggagg
aggagcagagggcaggagggccatagtgaaggcagcgccagcgatcctgcactgccatcc
ccataccagcacacactcagcagccttcaccaaggagaggagcagtactcatctaccacc
accaggtggcaatgttctacctctcaccaccattcagagttaactgagcctcaagctgac
tcccccaggggggtagcggctcagaaaaacacagcttcatggtcaaatcaaggacacaca
gattcctttagggaaatcaggagtgaattgagagagcctttaagtgaggattcagaggac
tcggacacagttttctctgaacaactctctgtcttgtcccagagactgaatgaaagactc
atcacggcacctcatcgacggcgggcatctttacatcagccacaagagagaaactacaga
agtctgtgcactggtaacagcttcacagataagctcagaggctgggaggaggagagtgga
gagcaggatgaggactattatgaaaatggtgacctagagaagaggacacctaggaattgg
gatcaggaaaggaaccataaagatcaggatagagactctaggttagtcgacgtaagagaa
aggcgatgtagtcgcagtgaatctgtcagtctacatgacaggagcatacagagcaacaga
gacctagtgagaacttggagctataaggacaaccctgacaaacatgtccattttcaggac
aacaccaggagctctaacaggcagcatggtgaaagacgtggagtctgggagatgctaggc
caggtcctcagagagaggggtgtgcctgtgaggtttggcggcaacagggcgccactgcaa
ataaggcctcaaagcagagagagccaggtgcttcatgggagtgaggtctcctgtagcgac
tcccaaccacatcagagagtcttccagagagctgcctccaccaggcacagtttccatgga
gatatcagggagaggaggagattgtcataccgagagaacagtgggagagatcacagagaa
gaccgagacaggcaccgtaaagatgtggagcatgatggagaggtttatgagattagtagt
agtgactcacatcttgctaacagtgaaaagcgggacagtagaaggtggaaagagcacaga
tgcactaacaatgatgatagggagaggaatgcagatgattgcagggtcaagaggaaaaca
agccaacacaggcattggcacaagaccacgaaacaaaggttaagctcagaggaggagcag
gaggttgagaggagagtagagcggccccacagaagagccccacagcgtagccaaagcctc
agcagcagcggggcttcaaccagggataggtcaaggcacatggcagcaggaacggcattg
caaccagagcatggcgaggcaagcctggacctgggagagctgcggcaggttctacaggat
gaagaactggctcacaagctgcaggaggaagaggaacagctgttgaggaggaactcccag
ccctctccgtgtagtgcttatccagagggagacttcagagtagcacaagtggcacaggat
gaggaaattgcacgttttatgcagaagcaggaaattaagtcgaagcgtagatctcgcgag
ctagaagggccggcatcttggcgcgagcacagaacaatgatcagtcatcatgacagacaa
gctgcaagagacagacagggccaacgagagaggcttgactcagagggccttccttccccc
actgaggactgctccccagagaatcagtcacccagccttatctccactttaccacaagcc
cagcagatcagaaacattgcggaagagctggacccgaccttccaggctaggaggcaagac
atagagagcctcagagtgagacaaacaggtccaacctgtcagtcacttcccatgccgcat
tctagcttacgtgacctcctcgaggagcctactttcatcccacctactaaacggcaaacg
gacaaatcaggacgcacgaaacccaaagagaagaaggaaaattgcaagcaacaataa
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