KEGG   Siniperca chuatsi (mandarin fish): 122883035
Entry
122883035         CDS       T08948                                 
Symbol
kdm5bb
Name
(RefSeq) lysine-specific demethylase 5B-B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:schu01009]
    122883035 (kdm5bb)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:schu03036]
    122883035 (kdm5bb)
Enzymes [BR:schu01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     122883035 (kdm5bb)
Protein phosphatases and associated proteins [BR:schu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122883035 (kdm5bb)
Chromosome and associated proteins [BR:schu03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122883035 (kdm5bb)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHDvar_NSD PHD-1st_NSD
Other DBs
NCBI-GeneID: 122883035
NCBI-ProteinID: XP_044067034
LinkDB
Position
LG10:complement(25034759..25053644)
AA seq 1564 aa
MSLPRPDEFKPPPECPVFEPSWEEFRDPFAFINKIRPIAEKTGICKVRPPPGWQPPFACD
VDRLHFVPRIQRLNELEAQTRVKLNFLDQIAKFWDLQGCALKIPHVERKILDLYKLNKLV
ADEGGFDIVCRDRRWTKIALQMGFAPGKAVGSHLRGHYEKILYPYNLFQSGANLLAPEPA
SKLMRLEADPELEKCVQKPVQPVESPGSMESKDNKEHKLQDQAQRQPAQMPDACPSARRA
KRMKCEAICVKTESGEPGESKPNLRRRMGSLVAKQEPEKESPIPVKQEPVESKEPIIEAD
KSKSRYKKFIPPVPPSPQQGKMAPGISTNTFKYKVDLVVCLVCGSGGEEDRLLLCDGCDD
SYHTFCLIPPLHDVPRGDWRCPKCLAQECNKPHEAFGFEQAYRDYSLRAFGQMADAFKSD
YFNMPVHMVPTELVEKEFWRLVGAIDEDVTVEYGADIASKEFGSGFPIPNGKFKVSPADE
KYLKCGWNLNNLAMMNPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLH
WGEPKTWYGAPGFAAEQLEEVMRKLAPELFESQPDLLHQLVTIMNPNTLMAHGVPIYRTN
QCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWMPLGRQCVDHYRMLHRYNVFSHDEM
VCNMALKAGTLDVVLASAVHKDMVAMIREEQKLREKVKKMGVLHCKEAQYDHLQDDERQC
AKCRTTCYLSAITCPCSPGVLVCLHHVNDLCSCPFTNYTLNYRYTLDELFPMMSAVKQRA
ELYDNWASLVTETLEAKLEKKKGLPVFRSLLAESESKLFPDNDLLRRLRLVTQDAEKCSS
VAQQLLNGKRQTRYRCGSGKSCSQLTVEELSSFVRQLYNLSCSLPQAPMLKELLNRIEDF
QQHSEKVLADEVPSVAEIQSLLDVSFDFDVELPELPRLRVRLEQARWLEGVQQACAQPAT
LTLETMRRLIDQGVGLAPHPSVEKAMARLQELLTVSEHWEDKASSLLKARPPHSIETLSA
AAEKASSIPAYLPNCLLLKDTIRKAREWLQEAEELQASGGVPMMDSLSDMVLQGQAIQVH
LEPLDRLESLMVKVQEWKESAATTFLQRDSTLTLLEVLCPRCEVGNVGSPKRKAKKGKEL
LKSNKKKTPRLNTLSDVEKALSETKDSTSAMATLEELRVREMEAFSNLRAANESKLLPTA
DCMDLKVCVCQMAPMGAMLQCELCRDAFHSVCVRDPSDSCETQPWLCPQCQRSKKPPLNK
VLSLLASLRRIGVRLPEGDALHYLVERTVDWQHRAQQISQSCNLPELEERPGTPPTLTRW
ASGSQDTHNNTQAPCLTPEWNRTSHAQTVFYTEQRCIPLQGLSRDLEEQMVEGLLLEVSL
PEVQSLYHVLLDRASSQHTNRCMSPPQDESTDCDTHMQFNSQGKNLPLDQDDISGVRETM
AGSEKKAKRHLEREGLDTERRGKDKKHSHKRQKINKKNLQRRPASTLSSPRSDFSQSDDS
DEEMAVCPAERCQLPEGDEVDWVQCDGSCNQWFHQVCVGVTAEMAEKEDYICVRCTLNDG
HMRK
NT seq 4695 nt   +upstreamnt  +downstreamnt
atgagcctgccgcggccggacgagttcaagcctcctccggagtgcccggtcttcgagccc
agctgggaagaatttagagatccctttgccttcatcaataagatccgtcccatcgccgaa
aaaacgggcatttgcaaagtccgcccgcctccgggttggcagcctccgtttgcttgtgat
gttgacagacttcactttgttcctcgtatccagaggctcaatgaactggaggcacaaacc
agagtcaagctcaacttcttggaccagattgccaaattttgggatttgcagggatgtgct
ctgaagattcctcatgtggagaggaagattttggatctatataagctaaataagctggta
gcagacgaaggtggatttgacattgtctgtcgggacaggcgatggaccaagattgcacta
caaatgggcttcgcccctggcaaagctgtcggctcacacctgcgagggcattatgagaaa
atactctatccctacaacctgtttcagagtggagcaaacctgctggcaccagagccagct
tccaaactgatgcgtttggaggctgatcctgaacttgaaaagtgtgttcagaagccagtc
cagccagtggagagtccaggaagcatggagagcaaggacaacaaggagcacaagctgcag
gaccaagctcagaggcagcctgcccagatgccagacgcttgccccagtgctcgcagagcc
aagcgcatgaagtgtgaggcaatctgtgtgaagactgaatcaggtgagcccggcgagagc
aagccgaacctgaggcggaggatgggttctttggttgccaagcaagaaccagaaaaagag
agtcccattccagtgaaacaggaaccagttgaaagtaaggaaccaataattgaagctgac
aaatccaagtcacgatacaagaaattcatccctcctgttcctccgagtccacaacaagga
aaaatggctccagggatttctacaaatacgttcaaatacaaggtggatctggttgtgtgt
ctggtgtgtggcagtgggggagaagaagaccgcctgttgctgtgtgatggctgtgacgac
agctaccacaccttctgcctgatccctcctctgcacgacgtccccagaggagactggagg
tgccccaaatgtctggctcaggaatgcaacaaacctcacgaggcatttggctttgaacaa
gcatacagagactattccctgcgtgcatttggacaaatggctgatgcgttcaaatccgat
tacttcaacatgccagttcatatggtacccacagagctggtggagaaagagttctggcgt
ttggtgggagccatcgatgaggacgttactgttgaatatggagcagatattgcctcaaag
gagtttgggagcggattccccattccgaatgggaaatttaaggtttccccagctgatgag
aaatacctcaagtgtggctggaacctcaacaacctggcgatgatgaacccttctgtactg
actcatgtgacagctgacatctgtggcatgacactgccatggctttatgttggcatgtgc
ttctcctccttctgctggcacattgaggatcactggagctactccatcaactatctgcac
tggggggaacccaaaacctggtatggagcccctggttttgctgcagaacagctggaggag
gtgatgaggaaactagccccggagctgtttgagtctcagcctgacctgctgcaccagctg
gtcaccatcatgaaccccaacaccctgatggcccatggagtcccaatttacagaacaaat
cagtgtgctggtgagtttgtcatcacgtttcccagagcctaccacagtggcttcaatcag
ggcttcaacttcgctgaagcggtcaacttctgcactgtggactggatgcctcttggcaga
cagtgtgttgaccactatcgtatgctacaccggtacaatgtgttctcccatgatgagatg
gtgtgcaacatggccttgaaagcaggcacactcgatgtggtcctggcatcagctgttcac
aaggacatggtcgccatgatccgagaagagcagaaactgagagagaaagtgaagaaaatg
ggggtgttgcattgcaaggaggcacaatacgatcacctccaggatgatgagcggcagtgt
gccaagtgcaggaccacctgctacctgtctgccatcacctgtccctgtagcccaggagta
ctggtttgtctgcaccatgtcaacgacctctgctcctgcccctttaccaactatacactg
aattacagatacacactggacgaactgttccccatgatgtctgctgtgaagcagcgagct
gaactgtatgataattgggcctcccttgtgacagagactctagaggctaaactggaaaag
aagaaaggcctgccagtgtttcgctcccttcttgcggaatcagagtccaagctgttcccc
gacaacgacctgctgcgtcggctacgtctggtcacacaagatgcagagaagtgctcctcg
gtggcacagcagctattaaatggcaagaggcagaccaggtatcggtgtggtagtgggaaa
tcatgcagccagcttactgtggaggagctgagttcatttgtgaggcagctgtataacctc
tcctgcagtctccctcaagcccccatgttgaaggagctcttgaaccgcattgaagacttc
cagcaacacagtgagaaggtcctggcagatgaagttcccagcgtcgctgagatccagagc
ctgttagacgtcagctttgactttgacgtggagctgcctgagctgccgcgcctgagagtg
aggctggaacaggcacgctggctggagggggtgcagcaggcttgtgctcagcctgccacc
ctgactctggagaccatgaggaggctcatcgaccagggagttggcctggcacctcatcca
tccgtggagaaagccatggcacgcctgcaggagctgctcactgtgtctgagcactgggag
gacaaggcgagcagtctccttaaagccagaccaccacactccatagagactcttagtgct
gctgctgagaaggcatctagcatccctgcttacctcccaaactgtcttctccttaaagac
accatccgaaaagcccgagagtggcttcaagaagcagaggagcttcaggccagtggtggc
gtaccgatgatggacagcctctctgacatggtgttgcaaggacaagccattcaagtccac
ctggagcctttagacaggctggagtctttaatggtaaaagtgcaagaatggaaagaatct
gcggctacaactttccttcaaagagactcaacccttaccttactggaggtcctgtgtcca
agatgtgaagttggaaatgtaggttctccaaagaggaaggccaagaaaggcaaagaattg
cttaaaagtaacaaaaagaaaacaccaaggctcaacacactcagtgatgtggaaaaggcg
ctgtcagagaccaaggattctacctctgcaatggcaactctggaggagctgcgggtgagg
gagatggaggctttctctaatctcagggcagcaaatgagtcaaagctccttcccacagca
gactgcatggacctgaaggtgtgtgtctgtcagatggcgcccatgggtgcgatgctacag
tgtgaactctgcagggatgccttccacagcgtgtgtgtcagagacccgtcagactcctgc
gaaacacagccgtggctctgtccgcagtgccagcgatcaaaaaagccccccttgaacaaa
gtcctctctctactagcatctctgcggcgcataggagtgcgcctgccggagggggatgca
ctgcactatctggttgagaggacagttgactggcagcaccgagcacagcagatttcacag
tcttgtaacctaccagaactggaagagagaccaggaactcctcccaccttaacccgctgg
gcatcaggcagccaagacactcacaacaacactcaggctccttgtttgactccagagtgg
aataggacaagccatgctcagactgtcttctacaccgagcagagatgcatcccgctgcag
ggtttgagtcgggatctggaggagcagatggtggaagggcttctgctcgaggtgtctctg
ccagaggtccagagcctctaccacgttttattggacagagccagcagccagcacacaaac
agatgcatgtcgccaccacaggacgagtccacagactgtgacacacacatgcagtttaac
tctcagggaaaaaatctgcctctggaccaggatgacatcagtggtgtgagggaaacaatg
gctggctcagaaaagaaagcaaagcggcatctggagagagaaggtttagacacagagcgc
agggggaaggacaaaaagcactctcacaaaagacagaagattaataaaaagaacctgcag
cgcaggccagcttcgaccttgtcctctccgcgctctgacttctcccagtctgatgactct
gatgaggaaatggctgtgtgtccggcagagaggtgtcagctgccagagggagatgaggtg
gattgggtccagtgtgacggcagctgcaaccagtggttccaccaggtctgcgtcggtgtt
acggccgagatggcagagaaggaggactacatttgtgtcaggtgtacactgaacgatgga
cacatgagaaaatga

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