Siniperca chuatsi (mandarin fish): 122883049
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Entry
122883049 CDS
T08948
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00310
Lysine degradation
schu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122883049 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122883049 (prdm2b)
03036 Chromosome and associated proteins [BR:
schu03036
]
122883049 (prdm2b)
Enzymes [BR:
schu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
122883049 (prdm2b)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122883049 (prdm2b)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122883049 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_6
zf-C2HC_2
zf-C2HE
zf-C2H2_jaz
Zn_ribbon_PaaD
Zn_ribbon_19
zf-C2H2_11
TPR_Trm732
Motif
Other DBs
NCBI-GeneID:
122883049
NCBI-ProteinID:
XP_044067073
LinkDB
All DBs
Position
LG2:14765553..14780547
Genome browser
AA seq
1716 aa
AA seq
DB search
MAISGGTVETLDEIPAHVWRGLPDCLSLRPSAINQSRIGVWATRVIPKGKRFGPFVGEKK
KRSQVTSNVYMWEVYFPARGWMCVDATDPTKGNWLRYVNWARSSEEQNLFPLEINRAIYY
KVLRPIGPGEELLVWYTVEDNPEITAALEEERASSLNRKNSPRAKRARRKLLDRARQARL
GGFKKTSVTKPTVKEMWDGDEGLKEEDERPSTLGPLQELQETHPIASTGHRDVEDMSALM
TDRGNGKEEEEEEEEEEEEEDADDLEEPSEVQQQSAQHSPAAESMQNKQPVPLLNCGEES
HKDLQGKLESSSLAGQEPEGDPDLDPDGDLEGDAHGESYPCQHCERHFSTKQGLERHNHI
HAITNQQTQLFKCRYCSKSFGSQVGRRRHERRHESGTKKRPGSLAGTASLLSPVVQTDGS
SPDCTSPTSHYIAIGSQFTGGLLHNSEMQRKELGPHDRPFIMDENGESKELHPCKYCNKA
FGTHTNMRRHQRRIHERHLLPKGVRRKGMLLQEASVQQQPDESPSTSPPPVYVPSADTED
EADRDDYAVDISKNISENLSFYIDGKIVSTSSVSTCEVIEVDSRSAALFGLDTVIISPNQ
IGQALKVEGRTSAAKQVSKIGQPAAKRRTSTPPLVPSLKVETETASFTASSSSSSSSTSS
SSNLLVGGLLQQAADSSAFQREKTVYLSPKLKQLLQTQDIQKSTIALITESHRLASPLSV
MPLPGASGRFKRRTASPPSSPQLSPACKTESCKAEVVSSYTLKVPKLESRSASPPGSLLD
KEDGDSLPGNNIHSQTSSSSGGNSCNQQPLDLSNSVSRRSDSLNKVLGDSALDLSFHRKS
NVEPELKGSPAPQPLIKKRKPNTSMLEKVLMNEYVGPTLPGEEGPSALANLSCFPSRSPN
IASESAHPSPPPLTPVTMNPSSPGSSSVTSPTPPPPVLPTIPSPPTMPSSPLSQPSDCSA
LRPLPVLSPKMSPRSVEHKPLSDSEEILSAEENKDEEEDHIPEPLDSPKTPLKDPLNFSA
TSSPPEPTSVDLLTTEDDVSMTTTCNSQLNGKINQNLDSVTEKPLAALSSQPDSSSCSLS
PPSASHDPSPSLVSQSLPQIKIKEETQHCVDELSVMNHVPQDGVGSSPQPAAPVKTSDKT
SEAEEVDSTYCRTFVCNVCEEPFNSIKELSGHIVEHAADWPFKCEFCVQLFGDAPALLAH
RTSLHGVGRIFVCSVCSKEFAFLCNLQQHQKDLHPNETCSHTTVESGKLRPQNYTDPSRA
KEESSPSTPAPETTDEAAPNNDSDLAKEEPDVNGNHAEDSAEDPNEELYTTIKIMASEGG
KPKGPDVRLGINQHYPSYKPPPFPYHSRSHAGSVASATNFTTHNIPQTFSTAIRCTKCGN
SFDNMPELHKHILACANASDKKRYTPKKNPIPLKQIVKSPNGVVSPSAAIAGQSAFRRMG
QPKRLNFNQDTGKMKMSALSKKKNQLVQKAISQKNKAATIAKKAVKIEEEQASNVCPHCS
REFTYPASLSKHMAVSCPMKPVVKKGKKGLTEVKKEAVVDKNMNRRKKASDCEIQQTEPE
PKPLGKTRTRSSGAADPEPSHASKGKTTAMLGRLKRPASFPARVSASKKTKKGQVQSLPP
TPSAPDTPSDTTQQRPAMRMQRMGKEAAPKRLAEAKSPPLPQQLKKEERFSLRTRDRVSG
PVTRSLQMANTAPSAEVKTEEPLIQEPKESQEVLMK
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggctattagtggagggacagtggaaactctggatgaaattccagctcatgtgtggagg
ggtttgcctgactgtttgagtcttagaccttctgctataaatcaaagccgcattggtgtc
tgggccactcgggttattcctaaaggcaagaggttcggcccatttgttggagagaagaaa
aaaaggtcccaggtgacgagtaatgtttacatgtgggaggtttatttcccagctcggggc
tggatgtgtgttgacgccacagaccccacgaaggggaactggctgcgatatgtgaactgg
gcacgctccagtgaagagcagaatcttttccccctggagatcaacagagccatttactac
aaagttttaaggcctatcgggccgggagaggagctgctggtgtggtacactgtggaagac
aaccctgagataacagctgcactggaggaagaaagagccagcagtctgaacaggaaaaat
tcacccagggcgaagcgagccagaagaaagctgctggacagagccagacaggctcgtttg
ggtggattcaagaaaacgagtgtaaccaaacctactgtcaaggagatgtgggatggagac
gagggtctgaaggaggaggatgagaggccatcaaccttagggcccttgcaggaactacag
gaaacacatcccatagcaagcactggccatagagatgtggaggacatgtcagcattgatg
acggacaggggaaatgggaaggaggaggaggaagaggaagaagaagaagaagaggaggag
gatgctgatgatttggaggaaccaagtgaagtacagcagcagtctgctcagcattcacct
gcggctgagtccatgcaaaataagcagcctgtcccattgctgaactgtggtgaagaaagc
cataaggatttgcagggaaagttggagtcttcctcgcttgcggggcaagaaccagagggt
gatcctgatcttgaccccgatggtgaccttgagggtgatgcccatggagagtcctatccc
tgtcagcactgtgagcgccacttctccaccaaacagggtctggaacgtcacaatcacatt
catgccataactaaccagcaaacacaactgttcaagtgccggtactgcagtaaatccttt
ggttcacaggtggggcggaggcggcatgagagaaggcatgagagtgggacaaagaaaagg
cctggctctctggctgggactgccagtctactcagtcctgtggtgcagactgacggttca
agtcccgactgcaccagcccaaccagtcactatatagccatagggtcccagtttactgga
ggacttctgcacaactctgagatgcagagaaaggagttggggcctcacgaccgtcccttt
ataatggatgaaaatggggagtctaaggaactccatccctgcaagtactgtaataaagca
tttggcacacacaccaacatgcgtcgacaccaacgcagaatacacgaacggcacttgtta
ccaaagggagttcgcaggaaaggcatgctgctgcaagaggcatcagtgcagcaacagccc
gatgagtcccccagcaccagccctccgcccgtctacgtgcccagtgcggacacagaagat
gaggcagacagggacgattacgcagttgacatatccaaaaacatctctgagaatttgagc
ttctacattgatggcaagattgtgtccaccagttcggtgagcacctgtgaggtgatagag
gtggactccagatctgcagctctgtttggtctggacaccgtaatcatcagccccaatcag
attggtcaggcattgaaggtggagggtagaacgagtgctgcaaagcaagtctccaagatt
ggtcaaccagcagcaaaaagaagaacatctacacccccacttgttcccagccttaaagtg
gagacagaaacagcatctttcacagcctcttcatcatcttcatcatcctctacatcttcc
tcatctaacttgttagtgggaggactgctccaacaagctgcagattcatcagcatttcaa
cgagagaaaactgtttatctctcacctaagctcaagcagctccttcagactcaagacatt
cagaaatcaaccatcgccctgatcacagaaagccataggctggcctccccactgtcagtc
atgccgctgccaggggcttcaggtaggtttaaaagaagaacagcctctcccccgtcatct
ccacagctcagtcctgcatgtaaaacagagagctgtaaagccgaggtggtgagctcatac
acccttaaggtgccaaagttggagagccgcagcgcgtcacctcctgggagcctactggac
aaggaagatggagatagccttcctggaaataatatacacagccaaacttcttctagtagt
ggtggaaattcctgtaatcaacagcccttggatctgtccaactctgtcagtaggaggagt
gacagcttgaacaaagtgcttggggattcagctcttgatttaagcttccatcggaagagc
aatgtcgagcctgaattaaagggaagtccagcaccacagccactgataaaaaagagaaag
cctaacaccagcatgcttgaaaaggtgctgatgaatgagtatgtaggtccaactttgcca
ggagaagagggcccttcggccttagcaaacctaagttgttttccttctcgctctccaaat
attgcgtcagagtctgcccacccctctccgccccctttgacccctgtcaccatgaacccc
tcttcccctggttcctctagtgtgacatccccaacaccgccaccccctgtactacctacc
ataccctctccgccgacaatgcctagctctcctctttctcagccttcagactgttctgca
ctgagacctcttcctgtcctctcgccaaaaatgtctccaagatcagttgaacacaagccc
ctgtcagactcagaggagattttgtcagctgaagaaaacaaagacgaggaagaggaccat
atccctgagccactggactccccgaagactccacttaaagatccccttaacttttcagcg
acatcaagccctccagagccgacatcagtagatctgctcactacagaagatgatgtttct
atgactacaacttgcaacagtcagctaaatggcaaaattaaccaaaacctcgactcggta
acagagaaacctcttgctgctctctcatctcagccagattcctcttcttgctcattatct
cctccttctgcatcacatgatccatccccatcactggtttcacaatccctccctcagatt
aagataaaagaagagactcagcactgtgtagatgagctgtctgttatgaatcatgtacct
caggatggtgttggctcttcacctcagcctgcagctcctgttaaaacgtctgataaaacc
tctgaggcagaggaagtcgactcgacatactgcaggacttttgtgtgtaatgtctgtgag
gagccgttcaactctatcaaagagctcagtggacatatcgtagagcatgctgcggattgg
cccttcaagtgtgaattctgtgtgcagctgttcggtgacgccccagccctgctggctcac
cgtacgtcactacacggagtgggcaggatctttgtatgctctgtttgttccaaggagttt
gcatttctttgtaacctccagcagcaccaaaaggatctccatccaaatgagacatgttca
cataccaccgtagagagtggcaagcttaggccacaaaactacactgatccatccagagcc
aaagaggaaagcagtccctcaacgcctgcaccagagacgactgatgaagctgctccaaac
aatgactctgatttagcaaaagaagagcccgatgttaatggtaatcatgccgaggacagc
gcagaggaccccaatgaggagctgtacactacaataaagatcatggcctcagaaggaggg
aagcctaaaggcccagatgtccgccttggcattaatcaacactaccccagttataaacca
cccccttttccttatcatagccgttcccatgctggctctgtggcttcggctactaacttc
accacccacaacataccacaaacgttcagcactgccattcgctgcaccaagtgtggcaac
agctttgacaacatgcctgaactgcacaagcacattttggcctgtgccaatgctagtgac
aagaagcgttacactcccaagaaaaatcccatccccctcaagcaaatagtgaagagtccg
aatggagtcgtgtcaccctcagcagccattgcaggccagagtgctttccgtagaatgggt
cagccaaagagacttaactttaatcaagatactggtaaaatgaaaatgagtgccctcagt
aagaagaaaaaccagctggtccagaaggcaatttcacagaaaaataaagctgccactatt
gcaaagaaggccgttaaaattgaagaagagcaggcctctaacgtctgcccccactgcagt
cgggagtttacttatcctgcaagtctcagtaaacatatggcagtcagctgtcccatgaag
cctgttgttaaaaagggcaaaaaaggtctcactgaagtgaaaaaagaggcggtggtagat
aaaaacatgaatcgtaggaagaaagcttcagactgcgaaatacagcagacagagccggag
cctaaacccctgggaaagaccagaactcgtagctctggcgcagcagaccctgaaccctcc
catgcaagcaaaggaaaaaccactgctatgctgggcagactaaagaggcctgcctcgttc
ccagcacgagtttctgctagcaaaaaaactaagaagggccaagttcagtctctacctccc
accccgtcagccccagacacacccagtgacactacacaacaacgaccagccatgagaatg
cagcgtatgggcaaagaggctgcacccaagagattagcagaggccaaatcaccaccacta
ccacaacagctgaagaaagaggagcggttctcccttcgaacaagggacagagtaagtggt
ccggtcaccaggagcttacaaatggccaacacggctccttctgctgaggtgaaaactgag
gaaccactaattcaagagccaaaagagtctcaggaggtgctgatgaagtga
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integrated database retrieval system
