Siniperca chuatsi (mandarin fish): 122883058
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Entry
122883058 CDS
T08948
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00310
Lysine degradation
schu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122883058 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122883058 (prdm2a)
03036 Chromosome and associated proteins [BR:
schu03036
]
122883058 (prdm2a)
Enzymes [BR:
schu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
122883058 (prdm2a)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122883058 (prdm2a)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
122883058 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2H2_11
zf-C2H2_jaz
zf-C2H2_6
zf-C2HE
zf-C2H2_3rep
zf-C2H2_8
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
122883058
NCBI-ProteinID:
XP_044067087
LinkDB
All DBs
Position
LG10:complement(13024170..13033126)
Genome browser
AA seq
1398 aa
AA seq
DB search
MEDSPHLYISNFSDNQDMEEREDEDIYQEETNMEPDMIKSLYPDLHKHPSQNTEGDWNSF
PCQHCERHFTSKQGLDRHMHIHAIANNEAHPYKSNMSNMSFGSNLGQLQHEKMKPLDSED
SVMQLHISSPTSSNTSILSAGDHTAQADEQGVLDDHHACKYCEKIFTTHTNKRRHERRIH
EQHLQLSRVEKTQLPQEENLQTIFSETSQQKTELGDSAAPAAVLENEGEHTEQYMLDVSS
NISENLSFYIDGKIVSTSTVSSCEAAEVHSGSSTLVRLDALILDPAHISQVLNTESVTSK
EIPGQPLTKRRTATPPLLPQIKTELESEVVVSSSSSSLVSSLIENLLPQNTESTIVQKER
TVFLSPKLKQLLEKQDGLKPTLALITDGQKPCSPVSLSVLPAGTGRFKRRTGSPPSSPQQ
NPTSNEEDIADCDAVSTGQMETQYSSSPVHETNEKDDTTQSVEDPAVKPVLTDSWRPLTG
GNSCNQQPLDLSNTVKRNEHVALADAVLDLSLQKKTPGESELTLKLVSQAVLKEGKSNTC
MVEKALINIGEQNVSLGNLETPLVTDFTIVTGPDIMTPVEPVAEGLVYGLALPPNSLTPS
PASLTPIALQPASPCTIAFASPASHTMLPTAPSLITVLAPPPPISNPSSQPIQVLAPNIS
SEPLVICTENALNSSDCDLTAAFATTNSANLVTLSQPLDPTLNLPGHVFLTDQIALNPPI
VESTPVSEVPFTPTVTLNDSLINSYNITSNTVLIECTIALEAPGSVVPAAITLQENTAVP
PASSQMVVNHIEQQQIVSVPNPPTVDPTILVSSIAESVTLSTTTSAISDCSTVGESSPDP
EPVVNAEPPTTKEEEADDSTVSIPEIPSKTSPSSEKAEEDESSNNTPDDAQQQTFTKNFI
CNVCDKLFHSMKELGHHVGDHADEWPYKCEFCVLLFGKPSALLDHRSSLHGVGKTYVCSS
CTKEFVYLCNLKQHQEELHPGQQCTYTEEEKGKLRRQNYNNSTKVNTESSVPDAPEEPKK
LVKKEEGEVDMTAEELFTTIKIMASDGGKIKGPDVRLGINQHYPSFKPPPFPYHNRSPAG
SLASATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKKNPIP
LRHFAKTQNGVLSTTNSTNGLNASNRPSQSNRSKPNQESPVKVKFKVLNKRKKKLAQRVM
PQRNKSVSSSNKVSPAQVDEQQEIFVCPHCSREFTMRRSRTKHMAVCPKKPKEVKKRKEG
GISVTKENDGHLHRGVEEKQQASPHHKTRLQTSGPAKRPAILPVQTVFSNKRSKIIIKES
MQPKQETPTLNELPIVRTFNPSMRQYSRVQHSVKGIPIKITIVKPQQTAPQKDELPPTQS
RDEATGAITNSSEQSPTT
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggaggactctcctcacttatacatctctaattttagtgacaatcaggatatggaggag
agggaggatgaggacatttatcaagaggaaactaacatggaaccagacatgatcaagtca
ctgtacccagatcttcataaacatccctctcagaatactgagggagactggaactcgttt
ccctgccagcattgtgagagacattttaccagcaaacaaggcttagatcggcacatgcac
atccacgctatagcgaacaatgaggcacacccatacaaaagcaatatgagcaacatgtct
tttggttcaaatctgggtcagttgcagcatgagaagatgaagcctctggattcagaggac
tcagtcatgcagcttcatatttcatccccgactagctctaatacttccattttgtcggct
ggagaccacactgctcaagcagacgaacagggagtattagacgaccatcatgcttgcaag
tactgtgaaaagatattcactacacataccaacaagcgacggcatgagcgcaggatccat
gagcagcacctgcaactctcacgtgtagaaaaaacccagctaccccaagaggaaaatctt
cagacgatattcagtgaaacatctcaacaaaaaacagagcttggtgacagtgcagctcct
gcagctgttctggagaatgaaggggaacacacagaacaatatatgctagatgtctctagc
aatatttcagagaatctcagcttttacattgatggaaagatagtgtcaacaagtacagtc
agtagctgtgaagcagctgaggttcattctgggtcttcgactttagttagactggatgcc
ctgattctagatcctgcccacatcagccaggttttaaatacagagtcagttacaagcaaa
gagatacctggtcaaccattgaccaagagaagaactgcaacaccacctcttttaccacaa
attaaaactgaactggagtctgaggtagttgtgtcttcatcctcatcatcacttgtatct
tctttaatagagaatctactccctcagaatacagagtctaccattgtgcagaaggaaaga
acagtgtttctgtcacctaaacttaagcagctcctggagaagcaggatggccttaaacct
acacttgccctcatcacagatggccagaagccttgttcaccggtctctctctctgtcctg
cctgctggaacagggaggtttaaaagaaggactggatctccaccaagctccccacagcaa
aacccaacatctaatgaggaagatatagcagattgtgatgctgtaagcacaggtcagatg
gagactcagtatagctcctcacctgtgcacgaaaccaatgaaaaggatgacacaacccaa
tcggtagaggatccagcagtgaaacctgtcttgacagacagctggcgccccttgactggt
ggtaattcctgtaaccagcaaccattggatctctccaatacagtcaaaagaaatgaacat
gtagctttagctgatgccgtgctggatttgagtttgcagaaaaagaccccaggtgaatct
gaactgacattaaaattagtttcacaggcagttttgaaagaaggaaaatcaaatacatgc
atggtggagaaagccttaataaatattggagaacaaaatgtaagcctagggaatcttgag
actcctttagtcacagactttaccatagttactggtccagatataatgaccccagtggag
cctgttgcagaaggacttgtttatggacttgccctaccccccaattctctgactccatca
cccgcctcccttacccctattgccttgcagccagcttcaccgtgcactatagcatttgct
tccccagcgtcacacaccatgctccctactgctccttcattaatcacagttttggcacca
ccaccacctatttctaacccttcaagccaaccaatccaggtattagccccaaatatatca
tctgagcccttggtaatctgcacagaaaatgcattaaattcttcagactgtgatttaact
gctgcatttgccactacaaattctgcaaaccttgtcactctctcccaaccccttgacccg
actctaaatctgcctggccacgtgtttctcactgatcaaatagctctcaatccacctata
gttgagtccactcctgtgtcagaagtgccattcacacccactgtaactttaaatgattcc
ctcatcaactcttacaacattaccagcaacacagtgttgatagagtgcacaatagctctt
gaagccccaggaagtgtagtccctgctgcaattaccttacaagaaaacactgccgtgcct
ccagcatcttcacagatggttgtcaatcacatagaacagcaacagattgtatcagtaccc
aaccctccaactgtggaccccactattcttgtgtcctccatcgcagaatcagtaactctg
tccaccaccacctcagcgatatctgattgttctactgtgggtgaatcaagtcctgaccca
gagcctgttgttaatgcagagccaccaaccacaaaagaggaggaagctgatgacagtact
gtttccatacctgaaatcccatctaaaacctcaccttcttctgagaaagctgaagaggac
gaatcctcaaacaacaccccagatgatgcacaacagcagactttcaccaagaatttcatc
tgcaatgtgtgtgataagcttttccattcaatgaaagaacttggccatcatgtaggtgac
catgccgatgaatggccctacaaatgtgagttctgcgtgctgctctttggcaaaccctcc
gctttgcttgaccatcgatcaagcctccatggtgttggcaagacttatgtttgcagttca
tgtacaaaagaatttgtctacctttgcaatctgaaacagcatcaggaagaattacatccc
ggccagcagtgtacatacacagaagaagaaaagggaaagctaagacgtcagaactacaac
aactcaacaaaagtcaacacggagtcttcagtgcccgatgctccagaagaacccaagaaa
ctggtgaaaaaggaagaaggtgaagtagatatgactgctgaagaattgtttacaacaata
aaaatcatggcctcagatggaggtaaaatcaaagggcctgatgttcgtcttggcattaac
caacattatcccagctttaagccccctccatttccttaccataacagatcacccgctggc
tcattggcttcagccacaaacttcaccacccacaacatccctcaaacctttagtacggct
attcggtgtaccaagtgtggaaaaagctttgataacatgccagaactacacaagcatatc
ctggcttgtgcaaatgccagtgataaaaggcggtacacacccaaaaagaatcccatccca
ctacgccactttgcaaaaactcaaaatggagttctatctaccactaattctactaatgga
ctaaatgcttcaaacagacccagccagtcaaataggtccaaacctaaccaagaatcacca
gtaaaggtgaagttcaaggtactgaacaaaaggaagaaaaagttggcccaaagggtcatg
ccacagaggaacaagtcagtctcttcatcaaataaagtgtcacctgcgcaggtggatgag
cagcaggagatttttgtctgcccacactgtagcagggagttcacaatgcgtcgcagcaga
accaaacacatggcagtctgccccaagaaacctaaagaggtgaagaaaaggaaagaagga
gggatctctgtgacaaaggaaaatgatggacacctgcatagaggggttgaagagaaacaa
caagcctcacctcatcataaaacaagactccaaacttctggccctgctaagaggcccgcc
atcctaccagtgcaaactgtcttttcaaacaaaagaagtaaaataattataaaagagagc
atgcagccaaaacaagagacacccactctcaatgaacttcccattgttcgcactttcaac
ccctctatgcgtcagtatagcagagtgcagcatagcgtcaaaggaatccccattaaaatc
accatagtgaaaccacaacagactgcaccacagaaggatgagctgcctcccacccagagc
cgagatgaagccactggagctattaccaacagctctgaacagagtcctacaacttga
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integrated database retrieval system
