Siniperca chuatsi (mandarin fish): 122883143
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Entry
122883143 CDS
T08948
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schu03400
]
122883143 (apex2)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
122883143 (apex2)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
122883143 (apex2)
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Amastin
Motif
Other DBs
NCBI-GeneID:
122883143
NCBI-ProteinID:
XP_044067369
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Position
LG10:24404010..24407731
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AA seq
577 aa
AA seq
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MKLVTWNINGIRAFRGGIKKALDSLGADIICVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRSGYSGVATYCKDSATPFAAEEGLTGLLTNHEGAVGCYGDQTEFCSEELQLLDNEGRAV
ITQHRIMCQDKEQTVTVINVYCPRADPEKPERKQFKLHFYKLLQCRAEAILKDGSHVIVL
GDVNTSHRPIDHCDPTDIDDFGENPGRKWLNGFLHGGKQEEERNEEEPNEDSEVTSTDPI
HSGKFVDTFRYFHPTRTNAFTCWSTLTGARQTNYGTRIDYIFADCQLSKEQFVAADIMPE
VEGSDHCPVWGQLSCSLLPSCKPPPLCTRYLPEFAGKQQKLSRFLVKVDQKSIQSERRDA
LPGSQEEGERRENLNPFRAGNVSGKKRTSDSVVPKGKKTKTIKTSSKPQGSLLSFFKPKL
TNAVPSTEAPVSQCQKTLSLDEVTSSQNSQKASTTIEDVSSVTSRVPEDAELVFDGSPQL
CNSSTSEENDKQMKTKHLTPQPTEPKKGASLVFWKSVLHGPPPPPSCKVHGEPCVRRTVK
KEGPNMGKQFFVCARPQGHTSNPEARCNFFAWVEKGK
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgttacctggaacataaatggcataagggctttcagaggtggcattaaaaag
gctcttgattcactgggcgcagatattatatgtgttcaagagacaaaagtgacaagagac
ttgcttgatgaaagaactgccattgttgacggctacaactcgtatttcagcttcagtcga
ggacgcagcggctattcaggagttgccacttactgtaaagacagtgccactccatttgct
gctgaggagggtctcacaggtctgctgaccaaccatgaaggggctgttggttgttatggt
gatcagactgagttctgtagcgaggagctgcagcttttggacaatgaaggacgagccgtt
atcacacagcacagaatcatgtgtcaggacaaagagcaaactgttactgtaatcaatgta
tactgtccacgggctgaccctgaaaagccggagcgaaagcagttcaaactgcatttctac
aagttgcttcagtgtcgggctgaagctatactgaaagatgggagccatgtgattgtttta
ggagacgtaaatacatctcaccggccaatagaccactgtgaccccactgatattgatgat
tttggtgaaaaccctgggaggaaatggctgaatggctttttgcacggtggcaaacaagaa
gaggaaagaaatgaggaggaacccaatgaagactctgaggtaacttctacagatcccatc
cacagtggaaaatttgtggatacctttcgctatttccacccaactcgcaccaatgccttc
acatgctggtccactctcactggagcgcggcagaccaactatggcacacgcattgactac
atattcgctgattgccagctatccaaggagcagtttgtggcagcagacatcatgccagag
gttgaggggtcagaccactgccctgtgtgggggcaactgagctgctctctcctgcccagc
tgcaagcctcctcccctctgtactcgctacctgccagagtttgctggcaagcagcagaaa
ctctcccgcttccttgttaaggtggaccaaaaatcaattcagtctgagcggagggatgca
ttacctggatctcaagaagagggggaaaggagggagaatttaaacccattcagagctgga
aatgtctctggtaaaaagcggacatcagattctgttgtcccaaaggggaaaaagactaag
acaataaagacttcttcaaagccacagggcagtctcctttcatttttcaaacctaaacta
acaaatgccgttccctctactgaagcccctgtcagtcagtgtcaaaaaacactcagcctg
gatgaagttacctcatcacaaaactctcagaaagcgtccacaactatagaggacgtgtcc
tcagtcacaagcagggtacctgaagatgctgagcttgtctttgatggatcaccacagctg
tgcaacagcagcacctcagaggaaaatgacaaacagatgaagacaaaacatttaacccca
cagcccactgagcccaagaaaggggcatcgttagtgttttggaagtcagtgcttcatgga
ccgcccccaccaccttcctgtaaagtccatggggaaccctgtgtgcgccggactgtaaaa
aaggaggggccaaacatgggcaagcagttctttgtgtgtgcccgtcctcagggacatacc
tccaaccctgaggctcggtgtaatttctttgcatgggttgagaaggggaagtga
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