Siniperca chuatsi (mandarin fish): 122883160
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Entry
122883160 CDS
T08948
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04510
Focal adhesion
schu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122883160 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122883160 (lamb2l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
122883160
NCBI-ProteinID:
XP_044067397
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Position
LG10:3353488..3416467
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AA seq
1848 aa
AA seq
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MRPGILMSIMAVYLSLLTLALSVFGQELPSGPHGCTEGSCYPATGNLLIGRAVNLSATST
CGLDRPEHYCIVSHLQESDKCFECNSQHHYDPYRHRNSHRIENVIYLMDSNGDNTWWQSV
NGQESVSIRLNLEAEFHFTHLIMKFKTFRPAAMIIERSADFGRTWRPYRYFASNCTKTFP
SIPANGLHHINDIICEERYSDIEPSTYGEVIYKVLDPAIHVKDPYSLDIQELLRITNLRI
NFTKLNTLGDDLLDRRSDVLQKYYYAIYELVVRGSCFCYGHASECAPVPGVGARENGMIH
GRCVCKHNTEGLNCERCRNFHNDLPWRPAESENPHSCRECNCNGHSNQCHFDMAVYLATG
NISGGVCDDCLHNTMGRHCDMCKPFFYQDPIRDIRDPRVCVACDCDPVGSLEGGVCDSHT
DLNMGMIAGQCRCKANVKGTRCDDCKEGYYGLSQNDPLGCQPCNCDPRGIIRMGAPCDQI
SGDCSCKRYVTGRYCNQCLPEYWGLSNDLAGCRPCDCDFGGAFNNRCMMENGQCDCRRHL
IGRQCSEVQPGYFCAPLDYYKYEAEDATGHSPGDSALPGKVRPQAETDCVQHLSNQLRRH
RRHRRITNSQQHRAALRRIRQLQQTPDVRTVHREHTPSHMVSWTGPGFARVKDGAGLVFT
IDNIPYAMEYDIMIRYEPESTEDWEAIVSITSVLLPSSLRCGNLLPTEQLYTVTLPHRNR
YIQMPRPFCFEPSNRYVVAIRFQRHGVSHRHLTAFILIDSLVLIPKYTELPGFQGNEQEA
EDRRDEMIRYMCLDSFMITPMSALAEMCSKLICSISSIIHDGALPCQCDPQGSLSGECDK
VGGQCRCKPNVMGRLCDQCAPGTYGFGMNGCTACDCHSEGSLSHQCDPVTGQCPCRQGAT
GRQCSDCQPGQWGFPSCSPCQCNAHADICDPRTGECRDCRDYTAGHLCEHCVDGFFGNPV
LGSGEHCRPCPCPGNPGSDHFNGESCQADHTSNQIMCNCRQGYTGPRCNQCAPGYYGNPE
QPGGQCLPCKCNGNINTQDPESCDPRTGQCLKCLYHTSGPSCAHCQHGYYGNALAQDCRC
CTCVTAGTVQSACSDGQCHCDPQTGACPCRENVTGHNCDQCAPNHWNYGQGRGCEPCGCD
PQHALGTHCNMFTGQCHCRPGFGGKRCTECEQLHWGDPRVQCQECNCHPQGSEMAQCDRI
TGACECREGAAGKRCDECARGFTGVFPKCVQCHPCFQLWDDAVCQIRRDLEHIQYTVQKI
LESGVTPGVGDTHIKQLERKLKQVQDLISAEDSDRIHQLIGQSIDDLRAEIALTDGRLMA
VARELNTTAEEEGALRRTLSDLERELRDINTTVARKQQLLDDYLTSGFADQFEKVKKYYL
ESVEAEEKCNASVSGTFSPVEQSKETRTLTEDLLDTSKDKFLRALAAQNKTLNELQQKAH
DLDKKAHHLSHKVCGGHGNASVTGSCSDSRCGGAGCRDNQGNRVCGGEGCNGTVSISVAA
LNHARNVTNSLNAANEDLQSVARKLQDIASLTQDVKNQAMNTLDKAQKKKDHFENNNKKL
KDFIKKIRDFLTEEGADPESIEKVALQVLSITLPVNRTTLEKMIMQIKDSLSNLTNIEGI
VNETSQHISKAKDLLDKAKDAKSRAEGVKDAANNTKQALDVSEKAIKKARVALKEAHDNL
NSTRNATAEVDKRLLQLEDKQKDAMMRLNNLSLGVEALRNKTEQNREMAKDAKALANNAT
QLASSLEQNLNDTEKRYHELQKKVDALGGESGGLTSIHQKAMEIKKEAEDLLNKATEGIE
QLRKLEKKFKSNEQRMQKQRMELDELKENATLVRDEIREQVQKYSNCQ
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccaggcatcctgatgtccattatggctgtgtacctgagcctcctcacgctggct
ctcagtgtgtttggacaggagctcccatcaggccctcatggctgcacggagggaagctgt
taccctgcaacaggaaaccttctaattggacgggctgtcaacctatccgccacctctact
tgcggcctggacaggccggagcactactgcattgtcagccatctgcaggagtcagacaag
tgtttcgagtgtaactcccagcatcactatgacccgtaccgccacagaaacagccaccgc
atcgaaaatgtgatctacctcatggacagcaatggagacaacacctggtggcagtctgtc
aacggacaggagagtgtcagcatcagactaaacctggaggccgaattccacttcacacat
ctcatcatgaagttcaagactttccgacctgcagctatgatcatcgagcgttcagctgat
ttcggccgcacatggcgcccctaccgctactttgcctcaaactgtaccaagacgtttccc
agcatccccgccaacggcctgcaccacataaacgacatcatctgcgaggaacgctactcc
gatatcgaaccctccacttatggagaggtcatttataaagttttggatcccgccattcat
gtgaaagacccctacagcttggacattcaagaacttctgcgtatcaccaacctgcgtatc
aacttcaccaagcttaacactctgggagacgacctgctggaccgacgctctgatgtcctg
cagaaatattactacgccatttatgagctggtggtcagagggagctgcttctgttacgga
cacgcctcagagtgcgccccagtgccaggggtcggtgcccgggagaacggcatgatccat
ggtcgctgtgtatgcaaacataatacagagggcctgaactgcgagcgctgccgaaatttc
cacaatgacctgccatggagaccagcggagtcggagaacccacacagctgcagagagtgt
aactgtaacggccactcaaaccaatgtcactttgacatggcggtgtatttggcaacgggc
aacatcagcggaggagtgtgtgatgactgtctgcacaacaccatgggacgccactgtgac
atgtgtaaacccttcttctaccaagaccctattagggatatcagggacccacgggtttgt
gttgcttgtgactgtgacccagtcggatcactggagggaggagtgtgtgacagtcacacc
gacctgaacatggggatgatcgcaggacagtgtcgctgcaaagccaacgtcaaaggcacg
cgctgcgacgactgcaaggaaggttattacggactcagccagaacgacccactgggttgt
cagccttgcaactgtgaccctcgtggcatcatcaggatgggagctccttgcgaccagatc
agtggggactgctcctgcaaaagatatgtcactggtcgctactgcaaccagtgtctgcct
gaatactgggggctcagtaacgacctggccggctgcagaccatgtgactgtgacttcggt
ggagccttcaacaacaggtgcatgatggagaacggccagtgtgactgcaggaggcatcta
attggccgacagtgttcagaggttcagcctgggtatttctgtgctccgctggactactac
aaatacgaggctgaagatgccactggacactcccccggtgattctgctctgccgggcaaa
gttcgtcctcaggcagagactgattgtgttcaacacctcagcaaccaactgaggaggcac
cggcgtcaccgtcgcattaccaactcgcagcaacatcgggcagcactgagacgtatccgc
cagcttcaacaaacaccagatgtgaggaccgttcatagagagcacactcccagccacatg
gtgtcatggacaggaccgggttttgcccgcgtcaaagatggtgccggcctggtgttcact
atcgacaacatcccctacgccatggagtacgacatcatgatccgctacgaacctgagtcc
acagaggactgggaggctatagttagtattacatctgtactgctgccatccagtctccgg
tgtggaaacctcctaccaactgaacagctctacacagtgaccctgccgcaccgcaacaga
tacatccagatgcccaggccattctgtttcgagcccagtaatcgttatgtagttgcaatc
aggttccagcgccacggggtctcacacagacatcttaccgccttcattcttattgactcg
ctggttctaatccccaaatacactgagcttcctggtttccaaggtaacgagcaagaggca
gaggatcggcgagatgagatgattcgctacatgtgtctggattcctttatgatcacgcca
atgtccgccctggcagagatgtgctccaaactcatctgtagtatttcatccatcattcat
gacggtgctctgccctgtcagtgcgaccctcagggctccctcagtggtgagtgtgataag
gtgggaggtcagtgtcgttgtaaacccaacgtgatgggtcgactctgtgaccagtgtgcc
ccaggaacctacggctttgggatgaatggctgtactgcctgtgactgccactcagagggc
tcattgagccaccagtgtgacccagttacaggccagtgcccgtgcaggcagggagccacc
gggcgtcagtgctcagactgccaaccaggccaatggggcttccccagctgcagcccctgt
cagtgtaacgcccatgcagatatctgtgacccccgcaccggggagtgtagagactgcagg
gactacacagcaggacacctctgtgaacattgtgtggatgggttctttggaaacccggtg
cttggttcaggggagcactgtcgaccctgcccctgccctggtaaccccggctcagaccac
tttaacggggaatcctgtcaagctgaccacacctctaaccagatcatgtgtaactgcaga
caaggctacactgggccccgctgtaaccagtgtgcgcctggttactacggcaacccagag
caacccggtgggcagtgcctcccatgcaagtgcaacggcaacatcaacacccaggaccct
gagtcatgtgaccccaggaccggtcaatgcctcaagtgcctgtaccacaccagcggccca
tcctgtgcccactgtcaacacggttactatggcaacgctttggcccaagactgcagatgc
tgtacctgtgtgactgctggcaccgtccagtctgcttgcagtgatggacagtgtcactgt
gacccgcagactggcgcctgcccttgcagggagaacgtgaccggccataactgtgaccag
tgtgctcctaaccactggaactacggtcagggccgaggctgtgagccctgtggctgcgac
ccacagcacgccctgggaactcactgcaacatgttcacaggccagtgccactgtcgtcca
ggctttggaggtaaacgttgcactgagtgtgagcagttgcactggggagaccctcgagtg
cagtgtcaagagtgtaactgccatccgcagggctcagagatggcccagtgtgacagaata
acgggagcgtgcgagtgcagggagggagcagcggggaagcgctgtgatgaatgcgctcgc
ggcttcactggcgtcttccccaagtgtgtccagtgtcacccgtgcttccagctgtgggac
gatgcggtgtgccagattagaagggacctggaacacatccagtacaccgtgcagaagatc
ctggagagcggagtcacgccgggagtcggggacacacacatcaaacagctggagaggaag
ctgaagcaggtgcaggacctgatcagtgcggaggacagcgacaggatccaccagctgatt
ggacagagcatcgatgacctcagggctgagatcgccctgaccgacgggcgtctgatggcc
gtcgcccgagagctaaatacaacagcagaggaagaaggggcactgagacgcacattgagt
gacctagagagagagctgagggacatcaacaccactgtggctcgcaaacaacaactgctg
gatgactacctcacctcaggatttgcagatcagtttgagaaagtgaagaagtactatctg
gagtcagtggaggctgaggagaaatgcaacgcttccgtgtctggtactttcagtcctgtg
gaacagtccaaagaaacccgcactctcactgaagacctgctggataccagtaaagacaag
ttcctccgtgctttggctgctcagaacaaaacattaaacgagctgcagcagaaagctcac
gacctggataagaaggcccatcacctcagtcacaaggtatgtggtggtcatggcaatgcc
agtgtcactggcagttgctcagacagccgatgcggcggtgccggttgccgtgacaatcag
ggcaatcgtgtatgtggaggagagggatgcaacgggacagtgagcatttctgtagcagca
ctgaatcatgccaggaacgtcaccaacagtctgaacgctgccaatgaggacctgcagagt
gtggcaagaaagctccaggatatagcctctctgacacaggatgtgaagaaccaggcgatg
aacacgctggacaaagctcagaagaagaaggaccacttcgaaaacaacaacaagaagctc
aaagatttcattaagaaaatcagagacttcctcactgaggagggagcagatccagagagc
atagagaaggtggctctgcaggtcttgtcaatcaccctgccagtcaataggaccactctg
gagaaaatgataatgcagataaaggacagcctttccaacctcaccaacatcgaggggatc
gtcaatgaaacctcgcagcacatcagcaaagccaaggatctgcttgacaaagctaaagat
gccaagagccgagcagagggagtgaaggatgcagccaataacaccaagcaggcattggat
gtgtctgagaaggccataaagaaagcacgagtagccctgaaggaggcccacgacaacctg
aacagcacaaggaatgctacagctgaggtggataagaggctattgcagctggaggataag
cagaaggatgccatgatgcgtttaaacaacctctccttaggggtggaagccctgaggaac
aagacagagcagaacagagagatggcaaaggacgccaaagcactggctaacaacgccaca
cagctagcatcctcactggagcagaacctcaatgacacagagaaacggtaccatgagctg
cagaagaaggtggacgctcttggtggggagtctggaggtctgaccagcatccaccagaag
gccatggaaataaagaaggaggcagaagacctcctcaacaaagccaccgaggggatagaa
caactcaggaaactggagaaaaagttcaagagtaatgagcagcggatgcagaagcaacgc
atggagctggacgagctgaaggaaaacgctactctggtgcgggacgagatccgggaacaa
gtgcagaagtacagtaactgtcagtga
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