KEGG   Siniperca chuatsi (mandarin fish): 122883185
Entry
122883185         CDS       T08948                                 
Symbol
cpne1
Name
(RefSeq) copine-1 isoform X1
  KO
K24526  RNA-binding protein 12
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:schu03041]
    122883185 (cpne1)
Spliceosome [BR:schu03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    122883185 (cpne1)
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 122883185
NCBI-ProteinID: XP_044067470
LinkDB
Position
LG2:7260779..7295654
AA seq 901 aa
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEAGAGAVETAAPTAGNANRQAGTTPISTVQ
PGAGGRSGSHGNQGFSNTPASATVASSSQAPPSNKAVASVVPSFPNSYSSTPTITTALAS
LNAGPPPIPPLPSMPSMPPMPTLPSMSVPPPVSSLPTVSPLSQGPPVPPMSHLPHMSSMP
PFNPSLPPPGGLGSGLPLGTHNPMLFNPLSPLASLGLQAHMKAAAAAAAAGAGVANPDEL
FVLLQNLPFSCSEMEVRGFFRGLGVDGVRLLRDGQGRPSGRAMVKFFSPQDSFEAVKRGG
GMMGQRFIEITPGSERQWASLNENATGHAPHNNSKLNNSNESQDQQHRRGNAGSGAGGRD
QRGRSRSPHRQEFCVYLKGLPYEADKKQIKDFFNNLAMMEESIYIAYGPNGRATGEGFLE
FKTEQDYKTALGAHMQYMGTRFIQVHPISRKGMLEKIDTIRKREAAQGDGKNQDGLKAPR
NCAHITNIPYNVSKKDVRAFLEGVGLYEDTLKVLTDSHGNGLGQAIFQLRTEEDARKAER
LHRQKLNGRDAFVHLVTFEQMKEIERNPPPQNKRGQRNQNQNQLNQNQNQHQQAQPSPQQ
PQINPFAGISGEEFNFLRNTMGNLNSAPFVTPFSTPGNGLAGPPPLPPLAAGLGDVNLGV
APPLVAGLPGAPILEPPGFRPGAAGGAPFSQDGMRGLVPFDNGNRKGGGGLQNRGGGANN
NQGRPGGGATGGQQVFTPGADGLRNQPTPGGSNNPNNQRGAAGPTIVKLQNMPFTVTVDE
IMDFFYGYQVLQGSVCLQFSEKGLPTGEAMVAFQNHEEATAAVMDLNDRPIGARKVKISL
G
NT seq 2706 nt   +upstreamnt  +downstreamnt
atggcagtagtcatcaggctgcagggtctgcccatagtggccggcaccatggacatcaga
cacttcttctctggccttaccatccctgacgggggagtgcacatcgtgggaggtgagcat
ggcgaggccttcatcgtctttgccactgatgaggacgctcggctggggatgatgcgtaca
ggcgggtccattaagggctccaaagtgtcactgttgcttagtagcaagacagaaatgcag
aacatgattgaactcagccgccgcaggtttgaggctggggcgggtgctgtggagacggct
gcacctacagcaggaaatgccaatcgacaagcaggcaccacccccatatccacagtgcag
ccaggggcaggggggagaagcggtagccatggaaaccagggtttcagtaacaccccggcc
tcagcgactgtagcaagctcatcacaggcgccaccgagcaacaaggcagtggccagcgtg
gtgcccagcttccctaacagctacagctccacccctacaatcaccacagctctggcatca
ctcaatgcaggccccccacccatccctccacttcccagcatgccttccatgccccccatg
cccacattgccctccatgtcagttcctcctccagtgtcctcccttcctactgtctccccc
ttgtcccaaggacctccagtgcctccaatgtctcaccttccccatatgtcttccatgcct
cccttcaacccctccctacctcctccaggaggactgggctctggcctccctcttggaact
cacaaccccatgctgttcaaccctctctcccccctggcctctcttggcctccaggcccat
atgaaggctgctgctgctgctgcagccgctggagcaggagtggccaatcctgatgagttg
tttgtcctcctgcagaacctcccattctcctgctcagagatggaggtcaggggttttttc
cggggtctgggggtggatggggttcgcctgctgagggatgggcagggtcggccatctggc
agggctatggtcaagttcttctcgccccaggacagctttgaagctgtgaagcgaggaggt
ggcatgatgggccaaaggttcatcgagatcaccccgggctctgagcgacaatgggccagc
ctcaatgagaatgctacaggccatgctcctcacaataacagcaaattaaataacagcaac
gagtcacaggaccagcagcaccgccgtggtaatgctgggtcaggtgcaggaggcagggat
cagcgaggaaggtcaaggtctccccaccggcaggagttctgtgtctacctaaagggcctt
ccctatgaggcagacaagaaacagataaaggacttctttaacaatttggccatgatggag
gaaagcatatacatagcctatgggcccaatgggcgagccacaggagagggcttccttgag
ttcaaaacagaacaggactacaagactgcacttggtgctcacatgcaatacatgggcacc
cgcttcatccaggtccacccaatcagccggaagggaatgcttgaaaagattgacactatc
cgcaaacgtgaagcagcacaaggtgatggcaagaaccaagatggcctgaaagctcccaga
aactgcgcccacatcaccaacatcccttacaatgtctccaagaaggatgtccgtgccttc
ctggagggtgtggggctttacgaggacaccctgaaggttttgacagatagccatggtaac
ggtttagggcaagctatcttccagctacggactgaggaagatgcccgcaaagctgaaaga
ctgcaccgtcaaaaactcaatggccgcgatgcctttgtccacctggtgacctttgagcag
atgaaggaaattgagaggaatcctcctccccagaacaagaggggccaacgtaaccagaac
cagaaccagctgaaccaaaatcagaaccaacaccagcaagcccagcccagtccccagcaa
ccccagatcaacccatttgctgggattagtggggaggagtttaactttctcagaaacacc
atggggaaccttaacagtgccccctttgtgactccattctcaacgccagggaacgggctg
gcaggccctcctcctctccctcctctggcagcagggctgggggacgtgaatctgggcgtg
gctcctccacttgttgccggtcttcctggtgctccaatcctggagccaccgggctttcga
cctggagccgcaggaggagcgccattcagccaggatgggatgagagggttggtgcctttt
gacaatggcaacagaaaaggaggtggaggattacagaaccgagggggaggggctaacaac
aaccaaggacgtccagggggcggggctaccggtggacagcaggtgttcactccaggagct
gatggtctccgtaaccagccgacccctggaggatctaacaatcccaacaatcaacgcggt
gctgctggcccgacaattgtaaagcttcagaacatgccgttcactgtaactgtggacgag
atcatggacttcttctacggctaccaggttctgcaaggctcagtctgcctgcagttcagt
gagaaaggcctgccaactggcgaggccatggtggccttccagaaccacgaggaggccact
gccgccgtcatggaccttaatgaccgacctattggagcacgcaaagtcaagataagcctg
ggttaa

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