Siniperca chuatsi (mandarin fish): 122883185
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Entry
122883185 CDS
T08948
Symbol
cpne1
Name
(RefSeq) copine-1 isoform X1
KO
K24526
RNA-binding protein 12
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122883185 (cpne1)
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122883185 (cpne1)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
122883185
NCBI-ProteinID:
XP_044067470
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Position
LG2:7260779..7295654
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AA seq
901 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEAGAGAVETAAPTAGNANRQAGTTPISTVQ
PGAGGRSGSHGNQGFSNTPASATVASSSQAPPSNKAVASVVPSFPNSYSSTPTITTALAS
LNAGPPPIPPLPSMPSMPPMPTLPSMSVPPPVSSLPTVSPLSQGPPVPPMSHLPHMSSMP
PFNPSLPPPGGLGSGLPLGTHNPMLFNPLSPLASLGLQAHMKAAAAAAAAGAGVANPDEL
FVLLQNLPFSCSEMEVRGFFRGLGVDGVRLLRDGQGRPSGRAMVKFFSPQDSFEAVKRGG
GMMGQRFIEITPGSERQWASLNENATGHAPHNNSKLNNSNESQDQQHRRGNAGSGAGGRD
QRGRSRSPHRQEFCVYLKGLPYEADKKQIKDFFNNLAMMEESIYIAYGPNGRATGEGFLE
FKTEQDYKTALGAHMQYMGTRFIQVHPISRKGMLEKIDTIRKREAAQGDGKNQDGLKAPR
NCAHITNIPYNVSKKDVRAFLEGVGLYEDTLKVLTDSHGNGLGQAIFQLRTEEDARKAER
LHRQKLNGRDAFVHLVTFEQMKEIERNPPPQNKRGQRNQNQNQLNQNQNQHQQAQPSPQQ
PQINPFAGISGEEFNFLRNTMGNLNSAPFVTPFSTPGNGLAGPPPLPPLAAGLGDVNLGV
APPLVAGLPGAPILEPPGFRPGAAGGAPFSQDGMRGLVPFDNGNRKGGGGLQNRGGGANN
NQGRPGGGATGGQQVFTPGADGLRNQPTPGGSNNPNNQRGAAGPTIVKLQNMPFTVTVDE
IMDFFYGYQVLQGSVCLQFSEKGLPTGEAMVAFQNHEEATAAVMDLNDRPIGARKVKISL
G
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagtcatcaggctgcagggtctgcccatagtggccggcaccatggacatcaga
cacttcttctctggccttaccatccctgacgggggagtgcacatcgtgggaggtgagcat
ggcgaggccttcatcgtctttgccactgatgaggacgctcggctggggatgatgcgtaca
ggcgggtccattaagggctccaaagtgtcactgttgcttagtagcaagacagaaatgcag
aacatgattgaactcagccgccgcaggtttgaggctggggcgggtgctgtggagacggct
gcacctacagcaggaaatgccaatcgacaagcaggcaccacccccatatccacagtgcag
ccaggggcaggggggagaagcggtagccatggaaaccagggtttcagtaacaccccggcc
tcagcgactgtagcaagctcatcacaggcgccaccgagcaacaaggcagtggccagcgtg
gtgcccagcttccctaacagctacagctccacccctacaatcaccacagctctggcatca
ctcaatgcaggccccccacccatccctccacttcccagcatgccttccatgccccccatg
cccacattgccctccatgtcagttcctcctccagtgtcctcccttcctactgtctccccc
ttgtcccaaggacctccagtgcctccaatgtctcaccttccccatatgtcttccatgcct
cccttcaacccctccctacctcctccaggaggactgggctctggcctccctcttggaact
cacaaccccatgctgttcaaccctctctcccccctggcctctcttggcctccaggcccat
atgaaggctgctgctgctgctgcagccgctggagcaggagtggccaatcctgatgagttg
tttgtcctcctgcagaacctcccattctcctgctcagagatggaggtcaggggttttttc
cggggtctgggggtggatggggttcgcctgctgagggatgggcagggtcggccatctggc
agggctatggtcaagttcttctcgccccaggacagctttgaagctgtgaagcgaggaggt
ggcatgatgggccaaaggttcatcgagatcaccccgggctctgagcgacaatgggccagc
ctcaatgagaatgctacaggccatgctcctcacaataacagcaaattaaataacagcaac
gagtcacaggaccagcagcaccgccgtggtaatgctgggtcaggtgcaggaggcagggat
cagcgaggaaggtcaaggtctccccaccggcaggagttctgtgtctacctaaagggcctt
ccctatgaggcagacaagaaacagataaaggacttctttaacaatttggccatgatggag
gaaagcatatacatagcctatgggcccaatgggcgagccacaggagagggcttccttgag
ttcaaaacagaacaggactacaagactgcacttggtgctcacatgcaatacatgggcacc
cgcttcatccaggtccacccaatcagccggaagggaatgcttgaaaagattgacactatc
cgcaaacgtgaagcagcacaaggtgatggcaagaaccaagatggcctgaaagctcccaga
aactgcgcccacatcaccaacatcccttacaatgtctccaagaaggatgtccgtgccttc
ctggagggtgtggggctttacgaggacaccctgaaggttttgacagatagccatggtaac
ggtttagggcaagctatcttccagctacggactgaggaagatgcccgcaaagctgaaaga
ctgcaccgtcaaaaactcaatggccgcgatgcctttgtccacctggtgacctttgagcag
atgaaggaaattgagaggaatcctcctccccagaacaagaggggccaacgtaaccagaac
cagaaccagctgaaccaaaatcagaaccaacaccagcaagcccagcccagtccccagcaa
ccccagatcaacccatttgctgggattagtggggaggagtttaactttctcagaaacacc
atggggaaccttaacagtgccccctttgtgactccattctcaacgccagggaacgggctg
gcaggccctcctcctctccctcctctggcagcagggctgggggacgtgaatctgggcgtg
gctcctccacttgttgccggtcttcctggtgctccaatcctggagccaccgggctttcga
cctggagccgcaggaggagcgccattcagccaggatgggatgagagggttggtgcctttt
gacaatggcaacagaaaaggaggtggaggattacagaaccgagggggaggggctaacaac
aaccaaggacgtccagggggcggggctaccggtggacagcaggtgttcactccaggagct
gatggtctccgtaaccagccgacccctggaggatctaacaatcccaacaatcaacgcggt
gctgctggcccgacaattgtaaagcttcagaacatgccgttcactgtaactgtggacgag
atcatggacttcttctacggctaccaggttctgcaaggctcagtctgcctgcagttcagt
gagaaaggcctgccaactggcgaggccatggtggccttccagaaccacgaggaggccact
gccgccgtcatggaccttaatgaccgacctattggagcacgcaaagtcaagataagcctg
ggttaa
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