Siniperca chuatsi (mandarin fish): 122883216
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Entry
122883216 CDS
T08948
Symbol
hoxc1a
Name
(RefSeq) homeobox protein Hox-C1a
KO
K09301
homeobox protein HoxA/B/D1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122883216 (hoxc1a)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
122883216 (hoxc1a)
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GFIT
Motif
Pfam:
Homeodomain
IL3Rb_N
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
122883216
NCBI-ProteinID:
XP_044067503
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Position
LG10:17067566..17077058
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AA seq
320 aa
AA seq
DB search
MTSYQELTAEGESSPLFTGCCRAKEVINQDLDCRAHPELGSRDEEGKLEVELASGFNTPH
PRYLTLSNSLTLCTFLDSPPPPPPPPPPCEPLEGFSTPACPHSSCVPWRCRAQGQGSPGR
GYSASNNNEPLQSGFGSLTEQIQIYSQNGPEIHVAVGSSVGSDCNVADMDVNSKTFEWMR
VKRSQHRAARMHMTCGFSIVGSGVGAVEAGSSSICTDGHPTANGAPRTSFSTKQLTELEK
EFHFNKYLTRARRVEVASALQLSETQVKVWFQNRRMKQKKLQRDGLLSDPGPAAPHSHAD
TLDTCPSPGPSSPKHLTLNS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctatcaagagttaacggccgaaggggaaagtagccctctgttcacgggctgc
tgccgagcaaaagaggtcataaaccaggacctggactgcagggctcatcctgaactcggc
agtcgtgatgaggaggggaaactggaggttgaacttgcctcaggatttaatactccgcat
ccccggtacttaactctttccaacagtttgactctgtgcacctttttggacagccctcct
cctcctcctcctcctcctccaccgtgtgagcctctcgagggcttctcgacaccggcctgc
ccccactcgtcctgtgtcccgtggcggtgcagggcgcaggggcagggctctccaggacgc
ggatacagcgcatcaaataacaacgaaccgctacaatccggttttgggtcacttacagag
caaattcaaatctactcacaaaatggccccgagattcacgtcgccgtggggagttccgtt
ggctcggactgtaatgtggctgatatggatgtaaacagtaaaacttttgagtggatgaga
gtgaagaggagtcagcaccgggcggccaggatgcacatgacctgtgggttcagtattgtt
ggctcgggagtcggtgctgtggaggctggaagcagcagcatctgcacggatggccatccc
acggcgaacggggccccgaggaccagcttcagcaccaagcagctgaccgagctggagaag
gagttccacttcaacaagtacctgacgcgggccaggcgggtggaggtcgccagcgccctg
cagctcagcgagacgcaggtgaaagtttggtttcaaaacagacgcatgaagcagaagaaa
ttacagagagacgggctgctctccgacccggggccggcggcaccgcactcacacgctgac
actctggacacctgcccctctcctggaccgtcctcgccgaagcacctgaccctgaactcc
tga
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integrated database retrieval system
