Siniperca chuatsi (mandarin fish): 122883272
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Entry
122883272 CDS
T08948
Symbol
nr1h5
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5
KO
K08538
farnesoid X receptor beta
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122883272 (nr1h5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
schu03310
]
122883272 (nr1h5)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122883272 (nr1h5)
Nuclear receptors [BR:
schu03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
122883272 (nr1h5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122883272
NCBI-ProteinID:
XP_044067628
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Position
LG10:5461402..5476990
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AA seq
493 aa
AA seq
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MREWTELEMSFSAGGFLSAADGYCSTEQLQYYDMLGDPLGYPLQDPDLQLLPYSQQQYST
ANLPFSLYGSPPSSTSSPSSSSSSSQPCHPLYHYSPHCLEAPCEPSPEPHCGGLAQGLGA
VGLPLGRRTRVGSGGKSRGQDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYHC
KSGGSCEMDMYMRRKCQDCRLRKCRAVGMLAECLLTEVQCQSKRLRKGGKDRRQEEEENT
DSRRVSSTSRPPGQASSASLTREQKYIVDRMVEAHRLYRAQDSSHCRLFEWPCTEEGEGL
SDVASPQLQRLLQFARTVPGFDLLDFSDQRSLLSVSSLEVMFLLSAQQFSHNPTSPSPAL
QLFSMSTHNWLRNVESKESSHSRTLVSSGGSEDLFGPVLNFFHSMEMLRVTEAEYTLLTA
TALLCSDRASLQAASCVEKMQELILDMLSRVCGAHVGAACGRPQRFGRLLGRLTELRTLR
HNYLLLTRQQLGH
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggactgagttggagatgagcttttcggcaggggggtttctctccgccgcg
gatggttactgctccacagagcagctccagtactatgacatgctgggtgaccctctgggc
taccccctgcaggaccctgacctccagctgctcccttacagccaacaacagtacagcacc
gccaacctgcccttctccctctatggctctccgccctcctccacctcgtctccctcctct
tcttcttcctcctcacagccctgccatcctctgtaccactacagccctcattgcctggag
gccccctgtgagcccagccccgagccccactgcgggggcctggctcaggggctcggagca
gtaggactgccgctggggcggaggacacgggtagggtcgggagggaagagcagaggtcag
gacgagctgtgtgtggtgtgtggagataaagcatcagggtatcactacaatgctcttacc
tgcgagggatgcaaaggtttttttaggcgtagtgtgactaaaaaggctgtgtatcactgt
aagagtggcggtagctgtgaaatggacatgtacatgaggaggaagtgccaagactgccga
ctgaggaagtgccgcgctgtgggaatgctggctgagtgccttctgacagaggtgcagtgc
cagtccaaacgactaaggaaaggaggtaaagatagaagacaggaggaagaggaaaacaca
gacagtagaagggtcagctctactagcaggccacctggacaggcttcgtctgccagttta
acccgagaacagaagtacattgtggacaggatggtggaggcccatcgactgtacagagca
caggacagcagccattgcaggttgtttgagtggccatgtacagaagaaggggagggcttg
tctgatgttgcatcgccccaattacaaagactgctacagtttgccaggacagtgccaggt
tttgacctcctggatttttcagaccagcgctctctcttgtctgtctcttcactggaggtc
atgttcctgctctcagctcagcagttctcccacaacccaacaagccccagtccagccctg
cagcttttcagtatgtcaacacacaactggctgagaaatgtagagtcaaaggaaagcagc
cacagtaggacattggtcagctcaggaggcagtgaggatctcttcgggccagtgctcaac
ttcttccacagcatggaaatgctgcgggtgacggaggctgaatacaccctcctcactgct
acagctctgctctgctcagaccgtgcatccctgcaggcagccagctgtgttgagaaaatg
caagaactgatcctggacatgctgtccagggtgtgtggggctcatgttggagctgcgtgc
gggagacctcagcggtttggccgcctgctgggcagactgacggagttgcgaaccctccgt
cacaactacctcctcctgacgagacagcagcttggacactga
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