Siniperca chuatsi (mandarin fish): 122883351
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Entry
122883351 CDS
T08948
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122883351
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
PDZ_2
MAGI_u1
Guanylate_kin
WW
DUF6288
Motif
Other DBs
NCBI-GeneID:
122883351
NCBI-ProteinID:
XP_044067828
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All DBs
Position
LG10:20661960..20761468
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AA seq
1623 aa
AA seq
DB search
MSKVIQKKNHWITKVNDCAVIRDACGELNVELRGGAENGEFPYIGQVREDAVVYQGGKVC
EGELLLEVEGLPVSGLPLYDILTVIKYCKGAVRLKTVRQGHKINKDLKHYLSLRFQKSSP
DHELQKTIRANLYRHAVPCTTRPPRAGEVPGVDYNFLSVEDFLELEESGTLLEIGTYEGN
YYGTPKPPRQPIIGTVILSDAGSQQSTPKRTKSYNDMQNARVVPADDDDDDQATEMNNSF
TGSLVRSLFPSPLLCTGNPNDQDESRGGILRPYPARDNAPSCGLNNAATSTADSGQQTLA
EPQVSPEDPLGQLPENWEMAYTESGELYFIDTAKAHHQDMAVYFQSFHNTKTTSWLDPRC
RDKASRPLEECDDDEEGIHTEDLETDLELPPGWERIEDPVYGVYYVELSHINRKTQYENP
VVEARRRKILEQQQQPQPPEGERYIREWIEEHSSAAAPLANYAANHLETYRDPQVPPTLP
PGPAGAKRGKPFFTRNPAELKGTFINTKLKKSRRGFGFTVVGGDEPDEFLQIKSLVLDGP
AAVDGKMETGDVIVSVNDTIVLGYTHAQVVKIFQSIPIGSMVDLALCRGYPLPFDPDDPN
TSLVTSVAILDKEPIIVNGQETFDSPSNQAGPINGMREPRPHSPSAEVASNGSHGYSSDV
VTLASSIATQPELITIHMEKGDKGFGFTIADSLTGGGQRVKQIVDYPRCRGLKEGDILME
VNKRNVQNMSHNQVVDLLSKCLRGSEVTMLVQRGVVPAKRSPKLVHQLERKDSQSSSQHS
VCSHRSTHTDSPSHPPSVMPSEAVAPTPAAPTQPLPGLPPQDPADGTLTLQKKPDPFKIW
AQSRSMYESRLPDCQEQDIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKYGAADEDGRLR
SGDELICVDGTAVVGKSHQLVVQLMQQAAKQGHVNLTVRRKTPGYPVSKGEGDVPPSPAS
SHHSSTQAPSLTEGKRTPQGSQNSLNTVSSGSGSTSGIGSGGGGGSGSAVVPASLQPYDV
EIQRGENEGFGFVIVSSVSRPDAGTTFAGNTCVAMPHKIGRIIEGSPADRCGKLKVGDRI
LAVNCCSITNKSHSDIVNLIKEAGNTVSLRIIPGDESSNASLLTNAEKIATITTTHTPQQ
STESRNNSKSKGAPPPPPTQSQTIQDAEFYSVDLERDSKGFGFSLRGGREYNMDLYVLRL
AEDGAADRNGKMRVGDEILEINGESTKNMKHSRAIELIKNGGRRARLVLKRGDGSVPEYD
GSSDGHPPTPGAQNTPEVRTLAPNSRYHTSLESSYPPDLHKPSRQDEAARGRDRDRAGSD
QMDYQGRQFNPHHHHTWNNNHSQSTPRQQSPDNSNSSSSGNKKSRGRKVKKSESESGISK
LLKTLRKDSSGKKAAAAEKLRGRELSSSSTTLDGRFRLQRRGSLDRSPTRKHASSPDRRR
AKSMDRRAERANRDRTPERECDDGGFLAVTPERKFYERQLLKDSQMAGRVREATTPERTN
NNGDSLSLSRGRIYDRATKNGNLLRDSSSERTEERYRMNGTPERRYRMERDSSPDSNYSR
DELNYAAAPRLKDYYSMMKNNAAHKNAAYNNTGHNNNSVGHSPNQLPEPKKRLYKESPKD
LSI
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagtcattcagaagaagaaccactggatcaccaaagtgaacgactgcgcggtt
atccgggacgcgtgcggggagctgaatgtggagctgcgcggcggagctgagaatggagag
ttcccatacatcgggcaagttagagaggatgctgtggtttaccagggcggtaaagtctgc
gaaggggagctgctcctggaggtcgaggggctgcctgtatctggattacccctttatgac
attttaactgtgattaagtactgcaaaggtgccgtcaggctaaaaactgtgcgtcaaggt
cacaagatcaacaaggacctgaagcactacctgagcttgaggtttcagaagtcttccccc
gaccacgagctgcagaagaccatacgagccaatctgtatcgccatgctgtgccttgtacg
acccgcccccctcgagccggagaggtcccaggggtggattacaacttcctgtctgtggag
gacttcctagaacttgaggagagtggcacactactggaaataggaacatatgaaggtaac
tattatgggacccccaagccgccaaggcagcccatcattgggacagtgattctcagtgat
gcaggctcccagcagtccaccccaaaacgcaccaagtcctacaatgacatgcaaaacgct
cgagtagtgcctgctgacgacgatgatgacgaccaggccacggaaatgaacaacagtttt
acaggatccttagtgcgtagtctcttcccctctcctttgttgtgcacaggtaaccctaac
gaccaggacgagagccgcggcggcatcctccggccgtaccccgcacgtgacaatgctcca
tcctgtggtctgaacaatgcggccacctccactgcagacagtgggcagcagaccctcgca
gaaccgcaggtctctccagaagacccgctggggcagctgcctgaaaactgggagatggcc
tacactgagagtggagaactttacttcatagacacggcaaaggcacaccaccaggacatg
gctgtgtattttcagagcttccacaacacaaagaccacatcatggctggatcctcggtgt
agagacaaagcctccaggcccctggaagagtgcgatgacgatgaagaggggatacatacg
gaggacctggagacggatctagagctgcctccaggatgggaaaggatagaagacccagtg
tacggggtgtactatgtagaactcagtcatataaacaggaagacccagtatgagaaccca
gtcgtggaggcgcggcgtcgcaaaatccttgaacagcagcaacagccgcagcctccagaa
ggtgagcggtatattcgagagtggatagaggaacactcctcagcagcggctccattagca
aactatgctgcaaaccacctggagacctatagggacccacaggtcccaccaactctacct
cccgggcctgcaggagccaaacgagggaagcctttcttcacaagaaacccagcagagctg
aaaggaaccttcatcaacacaaagctaaagaagagtcgtcgcggcttcggcttcactgtg
gttggaggcgatgagccagatgagtttctacagatcaaaagtctggtgctagacgggcct
gcagccgtggatggcaagatggagacaggtgatgtgatagtcagtgtgaatgacaccatt
gtgctgggctacacacacgctcaggtggtgaagatcttccagtccatccccatcggttcc
atggtggacctggccttatgtcgtggctacccgctgccctttgaccccgatgaccccaat
accagcctggtgacctcagtagcgatcttggacaaggagcctatcatcgtcaatggacag
gagacgtttgactcgccttccaaccaggccggacccattaacggtatgagggagccgcgg
ccgcacagcccctctgctgaggtggcttctaatggctcgcatggctactccagcgatgtg
gtcactctggcctcgtccatagccacccagcctgagctcatcactatccacatggaaaag
ggtgacaagggattcggcttcaccattgcagacagcctgacgggaggcgggcagagggtc
aagcagatagtggactatccacgctgccgtggcctaaaggagggggatattctgatggaa
gtcaacaagagaaatgtccagaatatgagccacaatcaggtggtggacctgctgagcaaa
tgtcttcgaggcagtgaggtcaccatgctggtgcaaagaggagtggtgccagccaagagg
agtccaaagctggtgcaccagttagagaggaaagacagccagagcagctcacagcacagt
gtgtgcagccatcgcagcacccacaccgattctcccagccacccaccctctgtcatgccc
agtgaggctgtggctcccactcctgctgcccccacccagcctctgccaggcctgccccct
caggaccccgcagatggcaccctcaccctccagaagaagccagacccctttaagatttgg
gcgcagtccaggagcatgtacgagagccgattgccagattgccaggagcaagacattttc
ctttggcggaaggatacaggcttcggcttccggatcctgggaggaaatgagcccggggag
cctatctacatagggcacatagtgaagtacggggcagcagatgaggatggacgcctgcgg
tcgggtgatgagctcatctgtgtggatggcacggcggtggtaggcaagtctcaccagctg
gtggtgcagctgatgcagcaggccgccaaacagggccatgtcaacctcacagtcagacgc
aagacccccggatacccagtgtcaaaaggggaaggtgatgttcccccatcgccggcctcc
tcccaccacagcagcacccaggcacccagcctgacagagggaaagcggaccccccagggc
agccagaactctctcaacactgtcagctctggcagtggatctaccagcggcataggcagt
ggcggcggaggtggcagcgggagtgcggtggtgcctgcctccctgcagccgtacgatgtg
gagatccagcgtggagagaatgagggtttcggtttcgtcattgtgtcatccgtttccagg
cctgacgccggcaccacctttgctggaaatacttgtgtggccatgccccacaaaatagga
cgcatcattgagggcagcccggcggaccgctgcgggaagctgaaagtaggggaccgaata
ttggctgttaactgctgctccatcaccaacaagtcacactcggacatcgtcaacctgatc
aaggaagccgggaacacagtctcgctcagaatcatcccgggtgatgaatcttccaatgct
tctctgctgacgaatgctgagaagatagctaccatcaccaccacacacacacctcaacag
tccacagagtcccggaataactcaaagtcgaaaggagctcctcctcctccacccacacaa
agtcagacaatacaggacgctgagttctactctgtggacctcgagcgggacagtaaaggt
tttggcttcagcctgagaggaggacgggagtacaacatggacctgtatgtgttgagacta
gcggaggatggggctgctgataggaatggcaagatgagggtgggagatgagatcctggag
attaatggtgaaagcacaaagaacatgaagcattcacgtgccattgaactgatcaagaat
ggtggtcggagggcgcggctcgtcctcaaacggggagatggatctgtacctgaatatgac
ggcagcagtgacgggcaccctcccacgcccggggcacaaaacactccggaagtgagaacg
ctggcacctaacagccgatatcacacctcattggagtccagttatccaccagaccttcac
aaaccatcacgccaggacgaggctgcgcgtggcagagacagggacagggcggggtcagat
cagatggactaccaaggccggcaatttaacccccaccatcatcacacctggaataacaat
cacagtcaaagtactcccagacagcagtctccagacaacagtaacagcagtagcagtggc
aacaagaagagccgaggccgcaaagtcaagaagtccgagtcggagagcggcatctctaaa
ctcctaaagactctgaggaaagacagctcggggaagaaggctgcagctgccgagaaactg
agggggcgagagctctcaagcagcagtactactttggacgggaggtttcgcctgcagcgc
cgcggctcccttgaccgctcaccaacccgaaagcacgcttcatctcctgatcgtcggcgg
gccaagtcgatggaccgcagggcagagcgagctaatcgggaccgtacacctgagagggag
tgcgatgatggagggttcctcgctgtcacccctgaacgcaagttctacgagcgccaactc
ctcaaggactcacagatggctgggcgagtcagggaggccacaacccccgagcgcaccaac
aacaacggggattccttgtctctttccaggggccgtatatatgatagagccacaaagaac
ggcaacctcctgagagactcttcctcagagaggacggaggagagatatcggatgaacggg
acaccggagagacgataccgaatggagcgggactcttcccctgacagcaactacagccgg
gacgagctgaactatgcagcagcacccagactgaaggactactacagcatgatgaagaac
aacgctgcacacaaaaatgctgcctacaacaacacaggccataacaataactcagtaggc
cacagcccaaaccagctccctgagcccaagaaaaggctatacaaagaaagccccaaagac
ctcagcatctag
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