Siniperca chuatsi (mandarin fish): 122883353
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Entry
122883353 CDS
T08948
Name
(RefSeq) rhodopsin
KO
K04250
rhodopsin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122883353
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
schu04030
]
122883353
G protein-coupled receptors [BR:
schu04030
]
Rhodopsin family
Vision
Opsin
122883353
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GFIT
Motif
Pfam:
7tm_1
Rhodopsin_N
7TM_GPCR_Srv
7TM_GPCR_Srx
7TM_GPCR_Srw
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
122883353
NCBI-ProteinID:
XP_044067852
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All DBs
Position
LG10:complement(20763689..20765172)
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AA seq
354 aa
AA seq
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MNGTEGPFFYVPMVNTTGIVRSPYEYPQYYLVNPAAYAALGAYMFLLIILGFPLNFLTLY
VTIEHKKLRTPLNYILLNLAVADLFMVFGGFTTTMYTSMHGYFVLGRLGCNLEGFFATLG
GEIGLWSLVVLAVERWLVVCKPISNFRFGENHAIMGLVFTWIMACSCAVPPLVGWSRYIP
EGMQCSCGVDYYTRAEGFNNESFVIYMFICHFIIPMSVVFFCYGRLLCAVKEAAAAQQES
ETTQRAEREVTRMVIMMGAAFLICWLPYASVAWYIFTHQGSEFGPVFMTIPAFFAKTASI
YNPLIYVCLNKQFRHCMITTLCCGKNPFEEEEGASSTASKTEASSVSSSSVSPA
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcacagagggaccatttttctatgtccctatggtaaacaccaccggcattgtc
cggagtccttatgaataccctcagtactaccttgtcaacccagcagcttatgctgccctg
ggtgcctacatgttcctgctcatcattcttggcttccccttgaacttcctcactctgtat
gtcaccatcgaacacaagaagctgcgaacccctctaaactacatcctgctgaaccttgcg
gtggctgacctcttcatggtgtttggaggattcaccacaacgatgtacacctctatgcac
ggctacttcgtcctaggacgccttggctgcaatttggaaggattctttgctaccctcggt
ggtgagattggcctctggtcactggttgttctggctgttgaaaggtggttggttgtctgc
aagcccatcagcaacttccgcttcggtgagaatcacgcaatcatgggtttggtctttacc
tggataatggcctgttcttgtgccgtgccccctcttgtcggctggtctcgttacatcccc
gagggcatgcagtgctcatgtggagtcgactactacacccgtgcagagggtttcaacaat
gagtcctttgttatctacatgttcatctgccacttcatcattccaatgtctgtcgtgttc
ttctgctacggccgtctgctctgtgctgtcaaggaggctgctgctgcccagcaggagtct
gagaccactcagagggctgagagggaagtcacccgcatggtcataatgatgggtgctgcc
ttcctgatatgttggttaccctatgccagtgtggcctggtacatcttcacacatcagggc
tctgagttcggaccagtcttcatgaccatcccggccttctttgccaagactgcttccatc
tacaatccattgatctacgtctgcctgaacaagcagttccgccactgcatgatcaccacc
ttgtgctgcgggaagaatccctttgaggaggaggagggagcatcctctactgcctccaag
accgaggcatcctctgtctcctccagctctgtgtctcctgcataa
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