Siniperca chuatsi (mandarin fish): 122883359
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Entry
122883359 CDS
T08948
Symbol
ogg1
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122883359 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schu03400
]
122883359 (ogg1)
Enzymes [BR:
schu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
122883359 (ogg1)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122883359 (ogg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-GeneID:
122883359
NCBI-ProteinID:
XP_044067858
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Position
LG10:20869139..20872324
Genome browser
AA seq
410 aa
AA seq
DB search
MAKHAVLLSGAKMWRSLACTKSELRLDLTLVCGQSFRWRETTEGHWTGVMGGRVWTLTQT
DDTLWYHVYKNQDRQVEESDRKRRAGVPFQMENKPEKRFKGALKKEEEEPVAVTLVQDTE
EEEEMLRDYFQLNVKLGDLYKEWGAADPHFKHIADIFTGVRMLRQDPTECLFSLICTSNN
NISRIQGMVERLCQALGAPLCQLDQTSYYNFPSLSALADNSVEACLRDLGFGYRARFLQQ
SAKQILDTHGLQWLEGLRSVPYLQACDALRTLPGVGTKVADCVCLMSLDKAEAVPIDTHV
WQIAKRDYNYASGSGQKSITDKLHRDIGDFFRKLWGPYAGWAQSVLFCADLKKFQKLKDM
LHLKQPQKEENGEEETSVACKKMKIRTEENGTVKNKKTKSVCHKKAKMSA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacatgcggtgctgttatcgggggcaaagatgtggagatccctggcctgtaca
aagtcagagctgcgtctggatctcactcttgtctgtggacaatctttccgctggagagaa
actacagaaggccactggaccggagtgatgggaggacgagtttggactctgactcagaca
gatgacactctttggtaccacgtttacaaaaaccaagacaggcaggtggaagaaagtgac
aggaagaggagagctggtgttcctttccagatggagaacaagccagagaagagattcaaa
ggagctttgaagaaggaagaggaggagccggtggctgtgactttagtgcaggacactgag
gaggaagaagagatgctgagagattacttccagctgaatgtgaagctgggggatctgtac
aaggaatggggagcagcagacccccacttcaagcatattgcagacatcttcacaggtgta
cgaatgctgcgccaggaccccactgaatgcctattttccttaatttgcacctccaacaac
aacatctctcgcatccagggcatggtggagaggctgtgtcaggctctgggcgccccacta
tgccaattggatcaaacgtcttactacaactttccttccctgtctgcacttgcagacaac
agcgtagaggcatgtctcagggatctcggttttggatacagggctcggttccttcagcag
agcgcaaagcagattttggacacccatgggctccagtggcttgaaggtttgcgcagtgtc
ccatatctgcaggcctgtgatgctctgcgtactctccctggtgtgggcaccaaggtggcg
gactgtgtatgtctgatgtccctggataaggcagaggccgtgcccatagacacacacgtg
tggcagattgctaaacgtgactacaactatgcttctggcagcggacaaaagagcatcaca
gataaacttcacagagatattggggattttttcagaaaactgtggggtccttatgctggt
tgggcacagtcggtgttgttctgtgctgacctcaagaagttccaaaaactgaaagacatg
ctacatctgaagcagccgcagaaagaggaaaatggtgaagaggaaacaagtgtagcatgc
aagaaaatgaaaattaggacagaagaaaatggaactgtgaagaacaagaaaaccaagtca
gtatgtcacaagaaagcaaagatgtctgcctag
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