Siniperca chuatsi (mandarin fish): 122883419
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Entry
122883419 CDS
T08948
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122883419 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122883419 (nfascb)
Cell adhesion molecules [BR:
schu04515
]
Immunoglobulin superfamily
L1 family
122883419 (nfascb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
BiPBP_C
Marek_A
Motif
Other DBs
NCBI-GeneID:
122883419
NCBI-ProteinID:
XP_044067992
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All DBs
Position
LG10:23824834..23843365
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AA seq
1179 aa
AA seq
DB search
MGTLVEPVLLLLLWQSVWALDIPLEIRQPPTIIKQSMKEHIVDPKETMVIECEAKGNPHP
IFSWRRNGKYYNVARDPQASMRRRSGTLDIYAWNNPEQYEAEYQCIASNEYGSAYSNKIR
LRLYRAPVWPREILEPVVISAGFPLVLSCDPPPGPPKPETYWMSSCSYARPFNWPIQTAF
PTMQPVRQDRRVSMGVNGDLYFSNVLFNDSAADYCCNARFPYKNVIQQKMPVVVKVLTTR
TVAEAAPTWLSPTGSSSSILVLQGEELLLECIAAGMPTPRITWTKDDEDLVVMSRMKVKN
FNKMIQIPKASFDDAGKYVCAATNKIGYIEHTITVRVKAAPFWLEKPADLVLAPEENGRL
VCRSDGVPRPTVSWFINGEPIETATPQPNRQVSGDTLTLRSVTTANNAVYQCNASNQYGY
LLANAFVNVLHATPRILGPRNELIKVTENSHTFLHCRYFGSPVPELRWSKYGQGNLEGNR
FKTHSNGTLEIKRIRIEDQGTYLCIVSNIAGRDESQVRIEVKEPTLIVTRPQSMKVIRGS
DVRFECVVKADVTTPVTTTWMKDKKLVTLGWRISLDESNLVITNVNRGDEGNYTCVIKSE
LDQKSASAHLMVMDRPDPPTNLELSDPYERSVRLSWVPGDSNHNPITEYLVQYDDDDWLP
GKWRNLSTYSGNLNSVILHLTPFTYYEFRVIAINEIGMSRPSRPSMRFQSSGAPPDVIPK
NVKGVGTWRNNMEISWEPLTYREWNGPHLKYLVWWKRRDSREEWKNATTKWLKYYIYDTD
TFTPYEIKVQAVNDFGLGPESPVVIGYSGEDRPLTAPLNLRVSDIESTEVTVHWDPVTRN
SIMGELKEYKVYYWRDSSQLRWLRVNRAMKSKAFPDNGPEPSGVLTGLIPYSNYKMYIVV
ANNRYEGPPSNNIHFSTPEGVPSAPRSFRIQQRHLDSIYVDWDLPAEPNGIITGYSLKYQ
TVNATRGEELQIEEFPPNVTSFSVRRYDRYTRYRFSVAARTRVGIGEWHTEESLHYTTEI
YAQDQVDISTQGWFIGIMCAVALIVLILLVVCFIKRSRGGKYPVREKKDISLEPVDDKDQ
EGSFDYRSLERIARVSTLPYPRREEERGLQRGQPSMEAMMKRSDSDDSLVDYGEGGEIPF
NEDGSFIGQYTGTRRDVRDLDFGGSLELHSPMNTIYSLA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggggacactggtcgaaccagtgctgctgctacttttatggcagagtgtttgggctttg
gacatccctttggaaatcaggcagcccccaaccatcataaagcagtcaatgaaggagcat
attgttgaccccaaagaaaccatggtcatagaatgtgaagcgaaaggaaacccccatccc
attttctcatggaggcgtaatgggaagtattacaatgtggcacgtgaccctcaagcatcg
atgcgcaggcgctcagggacactggacatctatgcctggaacaatccagaacagtatgag
gcagaatatcagtgcattgcctccaatgagtatggatctgcatactccaacaagatcaga
ctacgactatacagagctcctgtgtggccgagggagattctggagcctgtggtgatcagc
gctggctttcctctggtcctgtcctgtgaccctccacctggcccgcctaaacctgaaacc
tactggatgtccagctgctcatatgcgagacctttcaactggcccattcagacagctttc
cccaccatgcagcctgtgcggcaggaccgcagagtatccatgggagtaaacggagatctg
tacttctctaatgtcctgttcaacgactctgctgctgattactgctgtaatgcccgtttc
ccctacaaaaatgtcatccagcagaagatgcccgtggttgtcaaagtgcttacaactcgt
acagtggccgaggctgcccccacctggctgtctcccacaggctcatccagctccatacta
gttctgcaaggggaagaactgctcctggagtgtattgctgcaggaatgccaactcctcgt
attacgtggaccaaggacgatgaggacctggtggtgatgtcacgcatgaaggtaaagaac
ttcaacaagatgattcaaatcccaaaggcgtctttcgatgatgcgggtaaatacgtctgc
gctgctaccaacaagatcggatacattgagcacacaattactgtcagggtcaaagcggct
ccattctggttggagaagccagctgatttggttttggcccctgaggaaaatggacgcttg
gtatgtcgttctgatggggttcctcgtcccacagtcagctggttcatcaatggggaacca
attgaaactgctacaccgcagcctaacagacaggtgtcaggagacacgctgactttacgc
agcgtgaccactgcaaacaatgccgtctaccagtgcaatgcttccaatcaatatgggtac
ttattggccaatgcttttgtcaacgtgctacatgcaacaccacgtattctcgggcccagg
aatgaactcatcaaggtgacagagaacagtcataccttcttacactgccgctactttggt
tctccagtgcctgaattgcgatggtccaaatatggacaggggaatcttgaaggaaatcgt
tttaagacccacagtaacgggactctggagataaaacgcatacggatagaggaccaggga
acttacctgtgtatagtcagcaacatcgcaggaagagatgagagtcaagtccgaatagag
gtcaaagagcccactttaattgtcacaagaccacagagcatgaaagtcatacgtggaagc
gatgtgcgcttcgagtgtgtcgtaaaagcagatgtcactactcctgtcacaaccacctgg
atgaaagacaaaaagctggtcactcttggctggagaatctcactggatgaatcaaatctg
gtcatcactaatgtaaacagaggcgatgagggcaattatacctgtgtcatcaagagtgaa
ctggaccagaagtctgcctcagctcacctaatggtgatggaccgtccagatcctcccact
aacttggagttgtcagatccatatgaacgtagtgtaagactcagttgggtccctggagac
agcaaccacaaccctattacagagtacttagtgcagtatgatgatgatgactggttgcct
ggaaagtggagaaacctatcaacatactcagggaacctcaactctgtcattctgcatctt
acacctttcacctattacgagttccgggtcatcgctatcaatgaaatcggaatgagtcgc
cctagtcgtccatcaatgcgcttccagagcagcggtgcacccccagatgtcatcccaaaa
aacgtaaagggtgtgggtacatggaggaataacatggagatcagctgggagccactgacc
tacagagagtggaacgggccccacctgaagtatctggtgtggtggaaaaggagagattcc
cgagaggagtggaagaatgcaaccactaaatggctgaaatactatatctacgatacagat
accttcactccttatgagatcaaagtccaggctgtcaatgactttgggctgggtccagag
tctcctgttgtcattggttactctggggaagaccgtcccttaactgcacccctgaacctg
agggtgtctgacattgagagcactgaggtgactgtgcactgggacccagtgacacgcaac
tctattatgggagaactgaaagaatacaaggtctactactggagggacagcagccagctg
aggtggctgagggtcaacagagcgatgaagtctaaagcatttccagacaatggtccagag
ccctctggggtcctcactgggctcatcccctatagcaactacaagatgtatatagtggtg
gcaaacaatcgatatgaagggccgcccagtaataatatacacttctcaacacctgaagga
gtaccatctgctcccagatccttcaggatccaacagcgacatctggacagtatttatgtc
gactgggacctgccagcagaacccaatggtatcattaccggatattccctcaagtaccag
acagtgaatgccaccaggggagaggagctgcaaattgaagagttccctccaaatgtaaca
agtttctcagtccggcgatacgaccgctacactcgatacagattctctgtggcagcacga
actcgggtcgggataggggaatggcatacggaggagtcactccactacaccactgaaatt
tatgctcaggaccaggtggacatctccactcagggctggttcatcgggattatgtgtgct
gtggctctcatcgtgctcatcctactcgtagtctgcttcatcaagaggagccgggggggg
aaatacccagtacgggagaaaaaagacatttcactggagccggtggatgacaaagatcag
gagggatcatttgactaccggtctcttgaaaggatagcacgtgtctccactctgccttac
cccaggcgagaggaggaaagagggcttcaaagaggccagccgtctatggaggcaatgatg
aagcgatcagacagtgacgacagtctggtggactatggtgaaggaggagagataccattc
aacgaggacggctcgttcattggccagtacacaggaaccaggagagatgtcagggacttg
gactttggtggaagtctggagctccattctccaatgaataccatctactccctggcataa
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