Siniperca chuatsi (mandarin fish): 122883471
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Entry
122883471 CDS
T08948
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122883471 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
schu03310
]
122883471 (rarga)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122883471 (rarga)
Nuclear receptors [BR:
schu03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
122883471 (rarga)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PRIMA1
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
122883471
NCBI-ProteinID:
XP_044068134
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Position
LG10:16860268..16903084
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AA seq
509 aa
AA seq
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MATNREQQVGHMTGFPPAVYPFAFNSMRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSG
ELEELVNKVSKAHQETFPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
QTESNESPPPPPPPPPPPPALVLKQEAEDEEDSWATENGSEPSPEEEDEDDDDDVGDEER
DRGSDSDGEPWGVLDAIDGSRKGLVGRAQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacagggaacagcaggtgggtcacatgactggcttcccacctgctgtctac
ccctttgccttcaactccatgagaagccactcccctttcgacctgctggccaacagcagc
ctgtttgggagatttggtgctgacctgcccaaagagatggctgcactctcggtggagact
cagagcaccagctcagaggagatggtacccagttctccgtctccacctcccccacctcgt
atctacaaaccctgctttgtgtgccaggacaagtcctcagggtaccactatggggtcagc
tcctgtgagggctgcaagggtttcttccgccgcagtatccagaagaacatggtgtacacc
tgccaccgagacaagaactgtcagattaacaaggtcacacgcaaccgctgccagtactgc
aggctgcagaagtgctttgaggtcggcatgtccaaggaagctgtgcgtaatgacagaaac
aagaagaagaaggatgtgaaggaggaggtggtacttccagaaagctatgaactaagtgga
gagctagaggagttggtcaataaagtcagcaaagctcaccaagaaacctttccgtcactt
tgtcaattgggcaaatacaccaccaactccagctcagaccaccgtgtccagctggatctg
ggtttatgggacaagttcagtgagctctccaccaaatgcatcatcaagattgtggaattc
gccaagcggctgccaggtttcaccaccctcaccatcgctgaccagattactctacttaag
tcggcctgcctggatatactgatgctgaggatctgcacacgctacaccccagaacaggac
actatgaccttctcagatggcctgactctgaaccggactcagatgcacaatgcgggcttc
ggaccacttactgacctggtgtttgcctttgctggccagcttctacccctggaaatggac
gacacagaaaccggcctccttagtgccatctgtctcatctgtggagaccgtatggatcta
gaggagccccagaaagtggataaactgcaagagcctctacttgaggctctgaagatctac
gcccgccgccgtcgccccaacaaaccccacatgttcccccgtatgctgatgaagatcacc
gacctcaggggcatcagcactaagggtgcggagagagccatcactctgaagatggagatc
ccagggccaatgcctccgttgatcagggagatgctcgaaaacccagaggcctttgaggac
caaacagagtccaacgagagcccaccgcctccgccaccaccaccacctccaccaccagcc
ctggtcctgaagcaggaggctgaggatgaggaggatagctgggccacagagaacggcagt
gagccatcgccggaggaggaggacgaagacgacgatgacgacgtgggggatgaggagcga
gacaggggctcggacagtgatggggagccctggggggttctggatgccatagatgggtcg
aggaaaggccttgttgggagggcgcagtga
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