Siniperca chuatsi (mandarin fish): 122883487
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Entry
122883487 CDS
T08948
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122883487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122883487
Enzymes [BR:
schu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122883487
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122883487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_5
U-box
zf-UBR
FYVE
T3SS_LEE_assoc
Motif
Other DBs
NCBI-GeneID:
122883487
NCBI-ProteinID:
XP_044068173
LinkDB
All DBs
Position
LG10:7023356..7028619
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AA seq
547 aa
AA seq
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MSLSKPEEQLAYELSCPICLQLYSDPVVLPCGHNYCRVCICKTVDTTDKRDKTLPRCPEC
REEYQGVDSLQKNFKLCGIIEGYQATTLQLDKQPETQPESMEVFCDHCIDEQSLAVKTCL
KCEVSLCSRHLQRHHEKESFRAHTVVEPLKQLGMKGCAIHQHPFEYFCSNDMTLLCTTCF
IEGLHQNHDVLTFSVAEEEMRRALESRSKVVSYRLQMTESLLQMTAEEQGASEAIADTLV
NKAVTLMDSMAALMNRYRECLHVLLEEERGQHRKIWQLGLSALEEQQQQLLEAQQSATHA
LSETDTCIFIHRFMLIEHKLREVVTGTIPSKIPSKAPLNTKRLQAGLKTQDFRSEMTGLL
DSLHVLLNPLDLTFNLCTAHASLIVSSDLRTVKYSPTKQPYVEHPERFTSAPQVLCSQGF
SGGEHVWVVEVGVNSMWSLGVCYKSIPRRGDHSRLGHNSVSWRLQWKNGKLTVCQSSCNE
ALGKVTNHPLKIEIALDYEGGTLMFHSTKGRREHLHTFRAVFKEPVYPAFSIHSNTTESW
ITLHSGI
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgtccaagccagaggagcagctagcctacgaactgagctgcccaatctgcctt
cagctctactctgatcccgtggttctcccctgtggccacaactactgtcgagtctgtatc
tgcaagactgttgacactactgacaagagggacaaaacacttccacgttgcccagagtgc
cgcgaggagtatcagggtgtggattccctgcagaaaaacttcaaactctgcggcatcatc
gagggttaccaagccaccacactgcagctggacaaacagcctgagactcagcctgaaagc
atggaggttttctgcgaccactgtatagatgagcagtcactggctgtgaagacctgcctg
aagtgtgaggtgtcgctgtgttccaggcaccttcagagacaccacgagaaggagtcgttc
agggcacacactgtggtggagcccttgaaacagctggggatgaaaggctgtgccatccac
cagcatccctttgagtacttttgttctaacgacatgaccttactgtgcaccacatgtttc
atagaaggccttcaccagaaccatgatgttctcaccttcagtgtagccgaagaggagatg
aggcgagcactggagagccgcagcaaggtggtttcctacaggctgcagatgacagagagt
cttctacagatgacagcagaggagcaaggagcttctgaagctatagcagacacactggtc
aacaaggctgtcactctcatggacagtatggctgcactaatgaacaggtacagagagtgt
ctgcatgtgctattggaagaggagagaggccagcacagaaaaatctggcagctcggattg
agtgcactcgaagagcaacagcagcagttactggaggcccagcaaagtgccacacatgcc
ctcagtgagacagacacatgcatcttcatacacaggttcatgctgattgaacataagctg
agagaagttgtcacaggcaccattccctccaagataccctcgaaggctccactcaacact
aagcgtctccaggcaggcctcaaaacccaagacttccgctcagaaatgaccgggctcctg
gattccctacatgtcctcctcaaccccctggacctgacattcaacctctgcactgcccac
gccagcctgatagtctccagtgatctgcgcacagtaaagtacagccccaccaagcagcca
tatgtggagcacccagagcgttttacaagcgcaccccaggttctgtgcagccagggattc
tcgggtggtgagcacgtatgggtggtagaggtgggggtcaacagcatgtggtcgctgggt
gtgtgttacaagagtatccctcgccgtggtgaccacagtcgtctgggacacaactctgtg
tcctggcgattgcagtggaaaaatggcaagctgacagtgtgccagtcctcctgcaatgag
gctctggggaaagtgaccaatcatccgctgaagattgagatagcgctggactatgaaggg
gggacattaatgttccacagcaccaaagggcgcagggagcatctccacaccttcagggct
gtgtttaaggagccggtttacccagcattcagtattcattcaaacacaacagagtcctgg
atcacactgcacagtgggatatga
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