Siniperca chuatsi (mandarin fish): 122883586
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Entry
122883586 CDS
T08948
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122883586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122883586
03036 Chromosome and associated proteins [BR:
schu03036
]
122883586
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122883586
Coactivators
SAGA/TFTC/STAGA complex
122883586
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122883586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
122883586
NCBI-ProteinID:
XP_044068436
LinkDB
All DBs
Position
LG10:21873195..21889308
Genome browser
AA seq
981 aa
AA seq
DB search
MRLTSERSWAKMAAGSDLLDDVFFNTEVDEKVVSDLVGSLESELTRAGRVNTTARVQSAA
NHVCNSAVGSNSNVQGSKIGLSQQELAKAGTGVQGGVINSTGSPGSSMDGAAGTTSAAGP
SMTAAQSQSKPGTATGVVTIVSDATSGVGKPGTTGVQTLNGSAVVMNCHISGGASADSSG
NNNSQPAVTVVNNGPVSVSKGSAAVLSATPSTIIRTSSTSAQNAVISSQPSVKSVPTVTL
VRPPMQTPSNTSQSGGNLTTVLTSPSVSVTSTAGSLVNKFDTKTIIQTGGHVVATTVATG
TTVLQNLRTSVPSTITATPPGGIRTIAPQVLAPRLTQPQQNAPNIQNIQLPPGMVLVRSE
SGQLLMIHQQTLAQMQAQSQSQSAMTPRPAAPTSTPPVQITSLQAPGASLLARPVTPTTI
IKQGSTVQTTVTATTTLQRPPVLQNTIMLGGTATTPGQPLGTPTTVQPGSAATAATQRVG
PLGATGTPVTPTAITAETLENVKKCRNFLSTLIKLASSGKQSSETTANVKELVKNLLEAK
IEPEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDPEAFIQQSLLPQPSTQPAAAS
STALTAVVLRPPLSTAASTATSTAGSKTTVISLTQTPHSKPGLIVPQQQGMMVRPQVTLA
QSPMVTLRGQSHSRIIVGQPQVVKQLQTVKQMLVPGAKGVQVLSQGPLTAAQKNKLKEAG
EGTFRDDDDINDVASMAGVNLSEESARILATNSELVGAVTRSCKDETFLSTSLLTRRALE
IGKKFGVSELGTDVINYISHATQQRLQNLLEKVSQVAQQKNITFKEDEQYEQVSDVRAQL
KFFEQLDQMEKQRKEEQEREILLKAAKSRSRQEDPEQLRLKQKAKEMQQQELAQIRQREA
NLTALAAIGPRKKRKMDSPVRGASAEGSGSGPSQPGGSSGAGSRQFMRQRITRVNLRDLL
FCLENERGTSHSHLLYKGFLK
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcacgagcgagcgtagctgggcaaagatggcggcgggctccgatttgctggac
gatgttttcttcaacacagaggtggacgaaaaagtagttagtgatctagtcggatctttg
gagtctgagcttacaagagcaggccgcgttaacacaacggccagggtccagtctgcagca
aatcatgtttgcaactcagctgtaggtagtaattccaatgttcagggcagcaaaattgga
ctttcacaacaagagcttgctaaagcagggacaggagtgcaaggaggtgtcattaacagt
acggggtcccccggttcaagcatggatggagcagccgggaccacatcggcggcgggaccg
agcatgacagccgctcagagtcagtccaagccggggacagctaccggagtcgttactata
gtatcagatgcaacatctggtgttgggaaacctggaacgaccggtgttcaaactttgaat
ggaagtgctgtagtgatgaactgtcatatctccggaggcgcatctgctgacagcagcggc
aacaacaactcacagcccgcagtcacggttgtcaacaacggacctgtttctgtgagcaaa
ggaagcgcagcagttttgtctgcaacaccgagtactattattcgaacttcttcgacgagt
gcgcagaatgctgtgatttcgtctcagccctctgtgaaaagtgtacccacagtcacgctt
gtgaggccacctatgcaaactcccagtaacacctcacaaagcggaggcaacctaaccaca
gttttaacatcaccgtccgtcagtgttaccagcaccgctggctctcttgtcaacaaattt
gacacaaaaactataattcagactggcggacacgtcgtggctacaactgttgcgacaggg
acaacggttttgcaaaacttgaggacttcagtaccgtcaacaatcactgccactcctccc
ggtggaatacgtactattgctccacaggtgttggcccctcgactcactcagcctcaacaa
aacgccccaaatatccaaaacattcaactccctccaggcatggtcttggtgcgcagtgag
agtgggcagctgctgatgattcaccagcagaccttggctcagatgcaggctcagtcgcag
tcccaaagcgccatgacaccacgacctgcagctcccaccagcactccacctgtccagatc
acttctctacaggctccaggtgcatcactgctggctcgtccagttacccccaccaccatt
attaaacaaggttccacagtccagaccactgtgacggccaccaccacactgcagaggcct
cctgtactgcagaacaccatcatgctcggaggaactgccaccaccccaggacagccgcta
ggaacgcccaccacagtgcagcctggatctgcagccacagcagctacacagagggtaggg
ccccttggggccactggaactcctgtcactccaacagctatcacagctgagacactggag
aatgtgaaaaagtgtagaaactttctgtccacattgatcaagctggcatccagtggaaaa
cagtcctctgagactacggccaacgtcaaggagctggtcaagaacctgctagaagcgaag
atagagcctgaagatttcaccagtaggttataccgggagctcaactcctcaccacagcca
taccttgtgcctttcctgaagagaagtctcccagcactgcgtcagctgaccccagaccca
gaggccttcatccagcagagcctgctgcctcagcccagcactcagcctgctgcagcatcc
tccacagctctcactgctgtggtgcttcgacctcctctctctaccgccgccagtacggcc
accagcactgccgggtccaaaaccacagttatcagcctcactcagacacctcacagtaaa
cctggactgatagtgccccagcaacaagggatgatggtgaggccacaggtgacgctggct
cagtctcccatggtaacactcagaggacaatctcatagccgcatcattgtaggccagccg
caggtggtcaaacagctgcagacggtgaagcagatgttggttccaggggcaaaaggagta
caagtactcagtcagggccctcttactgctgctcagaagaacaagctgaaggaagcagga
gagggaactttcagggatgatgatgatatcaatgatgtggcctccatggcaggagtcaac
ttgtcagaggagagcgcccgtatcttagcaaccaactctgagcttgttggcgcggtgact
cgttcctgtaaggatgagaccttcctctccacctctttgctcacccggagagctctggag
attggtaagaagtttggtgtcagcgagttgggcacagatgtgattaactacatttcccat
gctacacagcagcgactacaaaacctgctggaaaaggtgtcacaagtggcacagcagaag
aacataacattcaaggaggatgagcagtatgagcaggtcagcgatgtgcgagcccagctt
aaattcttcgagcagctggatcagatggagaagcaaaggaaggaagaacaggagagagag
attctcttgaaggctgccaagtctcggtcacggcaagaggaccctgagcagctcagactt
aaacagaaggccaaagagatgcagcagcaggagctggctcagatcagacagagagaagcc
aacctaacggcactggcagcaatcggcccgaggaaaaaacggaaaatggattctcctgtt
aggggtgccagtgcagagggttcagggtcaggcccctcccagcctggaggctccagtggg
gcaggctccagacagtttatgcgacagcgcatcaccagagtcaacctcagggacctgctc
ttctgcctggagaatgaaagagggaccagtcactcacacctgctctataaaggcttcctc
aaatag
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