Siniperca chuatsi (mandarin fish): 122883587
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Entry
122883587 CDS
T08948
Name
(RefSeq) cadherin-4-like isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122883587
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122883587
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Major cadherins
122883587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_CELSR2_9th
DUF2254
Cytomega_TRL10
DUF2304
DUF5527
Motif
Other DBs
NCBI-GeneID:
122883587
NCBI-ProteinID:
XP_044068437
LinkDB
All DBs
Position
LG10:complement(21907421..22246044)
Genome browser
AA seq
993 aa
AA seq
DB search
MREPGNSGQSCGTLTEHKEGRNEQSDQERGKSHNYWRRIASRPSLWFLAQAALARLLATM
RTDFALVLTAALLLDTFWRNNGEHASKGPCRAGFSQSFYSVLISRDVLQGLGILKDTPVS
SQKVKFDDCMGNKAVVFQSSDPIFSVRTDGSIFAHGEGASLDEPVQFKLTASGPHTHVWE
TVVQLALIDPPSPQQNENEVTKEEGKVAERKGRKEAFQAPPPVIVFSGSGLNSSKGLRRQ
KRDWVIPPINVAENSRGPFPQMLVSIRSDQDKDISIRYSITGVGADQPPNEVFNIDPVLG
KMFVTKPLDRERRSSYHLRAHAVDMNGNQVENPIDLYIFVIDMNDNRPEFKNQVYNGSVD
EGSKPGTYVMHLSAFDADDNTTANGMVRYRILSQMPHSPIPNMFTINSETGDIVTVAPGL
DREKVSQYTIIVQATDMEGNLNFGLSNTATAIITVTDINDNPPMLTSRTFSGEVPENRVD
VVVANLTVIDADQPHSPNWNAIYRIISGDPSGHFTIRTDPVTNDGMVTVVKPVDFEMNRA
FMLTVVVSNQAHLASGIQSSLQSTAGVTISVQDINEPPYFPTNPKHIRFEEGVPAGTSLT
TFSASDPDRLQMQQTIRYSKLNDPADWLSINRTNGQIVTTAMLDRESVYVKNNIYEATFL
ATDNGSPAASGTGTLQIYLIDINDNPPVLIPRESQICERINKNVHGVNITAADADTDPNA
GPFVFELPNFPTSIRRNWTISRISGDYARLGLRYQVYLEPGVYEVPIIVSDSGNPPLSNS
SIIKVKVCPCDENGDCTTLGAVAAAGLGTGAIISILICIIILLSMVLLFVVWIKRREKER
QTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVRRVDERP
IIPESQYPIRPVVPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSL
NSSSTGDQDYDYLNDWGPRFKKLADMYGGGDDD
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgagagagccgggaaactcggggcagagctgcggcacactcacggagcacaaggaggga
cgtaacgaacagtctgaccaagaaagagggaaatcacacaattattggagaagaattgcg
agtcgaccctctctctggttcctcgcccaggcagccctggctcgcttgctcgccacgatg
agaactgacttcgctctggtcctcacagcagcccttcttcttgacacattctggaggaat
aatggggagcatgcttccaaaggtccctgccgagctggcttctcacaaagcttctactct
gtgttgatttcaagggatgtactgcaaggcctgggcatacttaaagataccccagtgtca
tcacaaaaagtgaagtttgatgactgcatggggaataaagcggtggttttccagagcagt
gaccctatcttcagcgtgcggacagatgggtccatctttgcccatggagagggagccagc
ctggatgaaccagtccagtttaaactgacagcaagtggtccacacacacacgtctgggag
actgtggtccaactggcactaattgacccaccttcacctcaacaaaatgaaaatgaggtc
acaaaggaagaggggaaagttgctgagagaaaagggaggaaggaggcgttccaagcacca
cctcctgtcatcgtgttctcagggtccggcctgaacagctccaagggtctacggagacag
aagagggactgggtgatcccaccaatcaacgtggcggaaaattctcgaggaccgttccct
cagatgctcgtcagcattcgttcagaccaggacaaggacatctcgatccgatacagcatc
actggggtgggagcagatcaaccacccaatgaggtgttcaatatcgaccccgtgcttgga
aagatgttcgtcaccaaacctcttgatcgagaacgtcgctcttcttaccatttgcgagcc
catgctgtggacatgaatgggaaccaggttgagaatcccatcgatctgtacatcttcgtc
atcgacatgaatgacaacagacctgagttcaaaaaccaggtctacaatggctctgtggat
gaaggctctaaaccaggaacatatgtgatgcacctgtcagcgttcgatgctgatgacaac
actacagctaacggaatggtgcgctatcgaatcctgtcccagatgccgcacagccccatc
cctaatatgttcaccatcaacagtgagactggagatattgtgactgttgcacctggtctc
gatcgagagaaagtgtcccagtataccatcatcgtgcaggccacggacatggagggcaac
ctgaactttggcctttccaacacagccactgccatcatcactgtcacggacatcaacgac
aaccctcccatgctgacctccagaactttttccggtgaggtcccagagaaccgagtggat
gttgttgtggctaatctaacggtgatagatgctgaccaaccgcactcacctaactggaac
gccatctacaggatcatcagtggagacccgtctgggcactttaccatccgcactgaccct
gtcaccaatgatggcatggttaccgtggtgaagccagtagactttgagatgaaccgtgcc
ttcatgctgacggtggtggtgtccaaccaggcccacctagccagtggcatccagtcttcg
ctccagtccacagccggggtcaccatatctgtccaggacatcaacgaacccccttacttc
cccacgaacccaaaacacatccgctttgaggagggtgtccctgctggcaccagcctgacg
accttctcagcttcagatcccgaccgactacagatgcagcagacaatcaggtattcaaag
ttgaacgaccctgcggactggttgtccatcaacagaaccaatggtcaaatcgtaaccaca
gcaatgctcgatcgggagtctgtctatgtcaaaaacaacatatatgaagccacattcctg
gcaacagacaatggatctcctgcagccagcggcacaggcacgctgcagatctatctgata
gatattaatgacaaccccccagtgctcataccaagggagtctcagatctgtgagcggata
aacaagaatgtccatggtgtcaacattactgccgctgacgcagacacagaccccaacgct
ggaccctttgtcttcgagctgcccaactttcccaccagcatccgacgcaattggacgatt
tctcggatcagtggtgattacgctcgtctagggctacggtaccaggtatacttagagccg
ggggtgtatgaggtccctataattgtgtcagactcggggaaccctccattgtccaacagt
tcgatcatcaaagtgaaagtctgtccctgcgatgaaaatggagactgcaccactctcggg
gccgtggcagctgctggcctaggaactggagccatcatctccatcctcatctgcatcatc
atactgctcagcatggtgctgttgtttgtggtgtggatcaagcgcagagagaaggagagg
cagaccaagcagctgcttattgaccctgaagatgatgtcagagacaacatcctcaaatac
gatgaagagggaggaggagaagaggaccaggactacgacctgagccagctgcagcagcct
gactccttggagcacatcatcagcaagccgcctggtgtccgcagggtggatgaacgtccc
atcatccccgagtcccagtacccaatcagacctgtcgtgccccaccctggcgatatcggg
gacttcatccacgagggtctgagggcagcagataatgaccccacagctcctccgtatgac
tccctgctggtgttcgactatgagggcagcggctctaccgccggctctgtcagctccctc
aactcctccagcacgggggaccaagactatgactacctcaacgactgggggccccgcttc
aagaagctggccgacatgtacggaggaggggatgatgattaa
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