Siniperca chuatsi (mandarin fish): 122883672
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Entry
122883672 CDS
T08948
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03266
Virion - Herpesvirus
schu04145
Phagosome
schu04510
Focal adhesion
schu04512
ECM-receptor interaction
schu04810
Regulation of actin cytoskeleton
schu04820
Cytoskeleton in muscle cells
schu05100
Bacterial invasion of epithelial cells
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
122883672 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122883672 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122883672 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
122883672 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122883672 (itga5)
04810 Regulation of actin cytoskeleton
122883672 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122883672 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122883672 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schu04147
]
122883672 (itga5)
04515 Cell adhesion molecules [BR:
schu04515
]
122883672 (itga5)
04090 CD molecules [BR:
schu04090
]
122883672 (itga5)
Exosome [BR:
schu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122883672 (itga5)
Cell adhesion molecules [BR:
schu04515
]
Integrins
Integrin alpha subunits
122883672 (itga5)
CD molecules [BR:
schu04090
]
Proteins
122883672 (itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
122883672
NCBI-ProteinID:
XP_044068626
LinkDB
All DBs
Position
LG10:25584258..25618873
Genome browser
AA seq
1059 aa
AA seq
DB search
MGLERFRVKTPGIVALLARSLLCIIGLLLTFSQPVCEAFNLDVENPAVYSGPKGSYFGYA
VDFYLADSSSASVVIGAPKANTRQVNITEGGSVFYCPWSLSQSDCHTIEFDTEGDRTVLL
NDTEHRVDFKSHQWFGATVRSHGDTILACAPLYSWRTEKDIPRSDATGTCYLSAHNFTKF
VEYAPCRTEISDAEGQGYCQGGFSADFTTDGKVVLGGPGSYFWQGQVIAAAKEDIIKAYY
PGYFMQSVQSQIQTKQVKAEHDDSYQGYSIAVGEFSGDEVEDFVAGVPKGLMLYGLVSIL
NGTDLKTMINYTGEQMGSYFGHAVATTDINSDGMADLLVGAPMFMVRGSDGRLEEMGRVY
VYLQGGPLNLELCLPHLTGSQVFARFGSTIAPLGDLNQDGFNDVAISSPFGGDDRQGLVY
IYNGYSEGLREQPSQVITGQWAAGTIPASFGFALRGAKDLDMNGYPDLIVGAFGVNKAVL
YRSRPIVNTSASLTVHPTMINPEEKNCMVTNGNTSIPVSCVNLSFCISADGKHLPGILDF
QVELQLDSHKHKQKGAVKRALFLDSQQPLLQRSVTVRHGERVCNNTKIYLRDEKEFRDKL
SSIYVALNFSLDPKAAADSHGLRPILNYQTTNVIEQKAQILLDCGEDNICVPDLKLAVHG
NRKEVYLGDDNSLTLTFNARNEGEGGAYEAELYVVLPPEADYSGIARNNESLTQLTCSYE
TENQTRYLSCDLGNPMKSGTSLWAGLRFTVPRLKDSHKTVHFELQIRSKNENNSHSEVVP
FKLEVVVQADVILQGVSRPDKVVFPPANWKVTKSYGVEQDVGPAVEHIYELVNNGPSRIS
HTLLELRCPLSVQGHTLLYPLEFSTEGPINCTSDKNMNHLHLKLQHTSTEPPILALKAHE
HHVERRDVHRNQLAHLTNLSCSNAECWELQCNVGLLEKGTTAILKVRSRIWAETFIERVY
KQYVLECLARYSVKKMPYAILPKHAPSGHKKVVTPVVWNKPDIENSVPLWIIILAILAGL
LLLALLIYVLYKFGFFKRSLPYGTAMEKAQLKPQAASEA
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggcttggaacgatttcgcgttaagacgccggggatagtagcccttctcgcccgctca
ctcctttgtattatcgggctattactcacattttctcagcctgtctgcgaggcgttcaac
ttggacgtggagaacccagctgtttacagcggacctaaagggagctacttcggatatgct
gttgacttttatttggctgattcttccagtgcgagtgtggtgataggagctcccaaggcc
aacacaaggcaggttaacattacagaaggaggatctgtcttctactgtccatggagcctc
agccaatcagattgtcacaccatcgagtttgatactgaaggggatcgcaccgtcttgctc
aacgacacagaacatcgggttgatttcaagtctcaccaatggttcggcgccactgtgcgt
tctcacggtgacacaattctggcttgcgcccctctctactcctggcggactgaaaaggat
atcccacgttctgacgctacaggaacctgctacctctcagcccataatttcaccaaattt
gtggagtatgctccctgccgcacagaaatcagtgatgcagagggacaaggctactgtcag
ggaggattcagcgctgacttcacaacggatggcaaagtagtattgggagggccaggcagc
tacttctggcaaggtcaggtgattgctgcagctaaggaggacattatcaaagcgtactac
ccaggctattttatgcagtctgtgcagagccagatccagaccaaacaggtcaaggctgaa
catgatgacagctaccaaggctactctattgctgttggggaattcagtggtgatgaggtg
gaagattttgtggctggtgttccaaaaggactcatgctttatggtttggtgtctattctg
aatggtacagatctgaagaccatgattaactacactggtgagcagatgggatcatatttt
ggccatgcagtggcaacaactgacatcaacagtgatgggatggctgacctgctggtggga
gctcccatgttcatggtccggggatccgatggccgtctggaagagatgggccgggtctat
gtttacctacagggtggcccccttaacctggagctctgcctacctcacctgacaggcagc
caggtgtttgcgagatttggcagcaccattgcaccattgggagatctgaaccaggatggt
ttcaatgacgtggctatcagctctccgtttggaggggacgatcggcagggactggtctac
atctataatggatactccgaaggtctcagggaacagccatctcaggtgatcactggacag
tgggctgctgggactattcctgccagctttggatttgccctcagaggtgctaaggacctg
gacatgaatggctacccagatctcattgttggtgcctttggtgttaataaggcagttctc
tatagatcccgcccaatagtaaacaccagtgcctctctgacagttcaccccaccatgatc
aaccctgaagagaagaactgcatggtcactaatggaaacaccagtattcctgtttcctgt
gtcaacctgagtttctgcatatctgctgatgggaagcacctaccaggcatcctagatttc
caggtggagttgcagcttgatagtcataagcacaagcagaaaggtgcagtaaagagggct
ttgttcttggattcccagcagcccttgctccagaggagtgtgacggtgcgccatggcgag
cgtgtatgcaacaacaccaagatctacctaagagatgagaaagagttcagggataaactc
tcctccatttatgtggctttgaacttcagcttggatccaaaagctgcagctgactcccac
ggcctgcggcccatcctcaactatcagaccaccaacgtaattgagcagaaggctcagatt
ctgttggactgtggagaggacaacatctgtgttcctgacttgaagctggcagtccatggg
aacaggaaggaagtctacctgggtgatgacaactcgctgaccttgactttcaacgccagg
aatgagggtgagggaggggcgtacgaggcagaactgtatgtggtgctgcccccagaagct
gactacagcggtattgcccgcaataatgagagcctgacccagctgacctgcagctatgag
acagagaaccagacccgatacctcagctgtgatttgggcaaccccatgaagtctggcacc
agtctgtgggcaggtctgcgcttcacagtgccacggctgaaggactcgcacaaaactgtt
cattttgagctgcagattcgcagtaaaaatgagaataattcccacagtgaggttgtaccg
ttcaagctggaggtggttgttcaggcagatgtcattctacagggtgtgtctcgaccagat
aaggtcgtcttcccgcctgccaactggaaggtgaccaaaagctatggggtggagcaggat
gttgggcctgcagtggaacacatctatgagctggtgaacaatgggcccagtcggatcagc
cacaccctacttgagctgcgctgccccctcagtgtccagggtcacactctcctttatcct
ctggagttctccacagaaggccccatcaactgcacctccgacaaaaacatgaaccaccta
catctcaaactccagcacacatccacagaaccacctatcctggccctgaaggcacatgag
caccatgtcgagaggagggacgtccacaggaatcaactcgctcatttgactaacctgtcc
tgttctaatgcggagtgctgggagctccagtgcaatgtgggtctgctggagaaggggact
actgctatcctcaaagtgcgctcccgcatctgggccgagaccttcattgagagagtttac
aagcaatatgtgctggagtgcctggctagatacagtgtgaagaagatgccttacgccatc
ctacccaaacatgctcccagtggacacaaaaaggtggtgaccccagtggtgtggaacaag
ccagatatcgagaactcagttcctctgtggatcatcatcttggccattctggctggttta
ctgcttctggctctactcatctacgtcctatacaagttcggcttcttcaagcgatctcta
ccttatggcactgccatggagaaagcacaactcaaaccgcaggctgcctctgaggcctag
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