Siniperca chuatsi (mandarin fish): 122883728
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Entry
122883728 CDS
T08948
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecule (CAM) interaction
schu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122883728 (nfasca)
04517 IgSF CAM signaling
122883728 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122883728 (nfasca)
Cell adhesion molecules [BR:
schu04515
]
Immunoglobulin superfamily
L1 family
122883728 (nfasca)
SSDB
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Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_PDGFR_d4
Fn3_ROS1
BiPBP_C
MUC7
Motif
Other DBs
NCBI-GeneID:
122883728
NCBI-ProteinID:
XP_044068755
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All DBs
Position
LG2:32123742..32291556
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AA seq
1359 aa
AA seq
DB search
MLGQGGHVALALMSLLLLLWREAAPIEVPQDPKILQDLKQPPTIVKQSVKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCF
ASNDFGVALSNKILLRVSKAPLWPKEVLEPVVVTEGSPLVLPCNPPPGLPPPFTFWMNSA
MTPIPQDKRVSMGLNGDLYFSNVLAKDAHTDYSCNARFLFTHTIQQKNPFTLKVLTSRKV
AESTPTFLSPSGSESSKMVLRDEQLLLECIAAGLPTPTIKWFKKGGDLPGRKVKFENYNK
TLKIINVSEEDAGEYVCMANNHLGSIRHSIFVQVKAAPYWLDKPTNLVLAPDENGRLVCR
ANGNPKPNIQWLINGQPIDSSPPNLSRQVLGDTIIFRSVQMGSSAVYQCNASNQHGYLLA
NAFVSVLDMTPRMLGPKNQLIKVIENNRTFLDCPFFGSPLPELRWFKNGQGSGLDGGQYR
VYINGTLEIKRARAEDEGTYTCVANSILGTAENQVRLEVKEPTGIVRAPEHQSAIRGSTA
RFDCKVKSDPSLPITVTWTKDDKPLHLGWRLRKDEESLTIPNVNEGDEGTYTCTVKSEID
QDSASARLTVLEEASLNPSVSSALPPDRPDPPMDLDLSDPAARSVRLTWIPGNDHRSPIT
QFLVQFEEDRWEPGKWQDLSTYPGDLNSVILQLAPFVNYQFRVIAINKVGQSQPSGPSPR
YKTSGAAPDAIPRGLRGWGSKKDNMEITWEPLLDLERNGLNLHYNVWWRRKDLGEEWSNV
TTVRSKHVVHNTETYMPYEIKIQARNEFGPGPESNVVIGYSGEDKPTDAPTDLRVSKVDS
TKANIHWKPVDPDSVQGEFKEYRLCYWRESSLVPGLVVSKEKKTKGFYSTMAEPSGILSD
LVPYSKYKMFMVVANNRFESPPSNTVEFTTKEGVPDAPRFFRINRRSFDTVHLEWDKPLE
PNGILIGYQLKYQTVNGSRLGRPQLETLLPNVTEFTLRLPDRSTRYKFYLSALTQVGAGE
VYAEESPHFANEENFTDATGLVELTDASVASAFTPTPPPLAPLPPTTIAPTTISTSTSTT
PTATTSTTTTTTTTTTPSTTTTTTEATTTITPPVLVTTKHTDQNVLVAPGREISNLTVEP
NSNYANVSWRHNFPAGSSEFVLEFTLDSNKTVKVVPVKQQPPITVADLIAGAKYHLRVYS
HELNSVSSKSVTFKTKAAYIDQVDIATQGWFIGLMCAIALIILILLIVCFIKRSRGGKYP
VRDKKDLPLDQVDQKDQEGSFDYHSDEDNKPLQGSQTSLDGNVKESDDSLVDYGEGGDGQ
FNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcagggtgggcatgtggccctggctctcatgtcattactgctgctactgtgg
cgcgaagcagcacccatcgaagtcccacaagatccaaagatcctgcaagacctgaagcaa
ccccccactatagtcaaacagtcagtgaaggactacattgtcgacccccgagataacatc
atcatcgagtgtgaggccaagggcaacccagtgccaacgttctcatggcgaaggaacggg
aagtttttcaacatcgggaaagatcccagggtgacgatgcgaaaacgctcgggaactctg
gagatcggtttccgaagcggaggacgaccagaggactacgaaggagagtaccagtgtttt
gccagcaatgactttggagtggctctgtccaacaaaatcctgctccgggtctccaaggct
cctttatggcctaaagaggtgctggagccagtggtggtcactgaaggctccccgctggtt
ctaccctgcaaccccccaccaggcctgcctcctccgttcaccttctggatgaacagcgct
atgactccgatccctcaggataagagagtgtccatgggtttgaacggggacctgtacttc
tccaacgttttggccaaagacgcgcacactgactacagctgcaatgctcgcttcctcttc
acacacaccattcagcagaagaaccccttcaccctcaaagttctgaccagccgtaaagta
gccgagtccacgccaaccttcctctcaccttcagggagtgagagctccaaaatggtgcta
cgagacgagcaactgctgctggagtgtatcgctgctggacttccaacgcccaccatcaag
tggtttaagaagggtggggacctgccaggacggaaagtgaagtttgagaactacaacaag
accctgaagattatcaacgtgtcagaagaggatgctggggaatatgtatgcatggccaac
aatcatttaggcagcatacgtcactccatctttgttcaggtcaaagcggctccttattgg
ctggacaaacctacaaacctggtgctagccccagatgagaatgggcgcctggtgtgtcgg
gccaatggcaaccctaaacctaacatccagtggctgatcaatggacagcctatagacagc
tctccccccaacctgagcagacaggtgctgggtgacacaatcatctttcgctcggtgcag
atgggaagcagcgccgtctaccagtgcaacgcctccaaccagcacggctatctgctggcc
aatgccttcgtcagcgtcctcgacatgactccgaggatgctgggccctaaaaaccagctg
attaaagtcatcgagaacaaccgcaccttcctggactgtcccttcttcggttcccctctg
ccagagttacgctggtttaagaacggacagggcagtgggctggacggcggtcagtaccgg
gtttacatcaacggcaccctagagatcaaacgggcccgagcagaggacgagggcacctac
acctgtgtggccaacagcatcctgggtacagcagagaaccaggtccgcctggaggtcaaa
gaaccgactggtatagttcgagccccggagcaccagtcagccatcaggggctccacggct
cgctttgactgtaaggtgaagtctgatcccagcctacccatcactgtgacctggacaaag
gatgacaagcctctccacctgggatggaggctgaggaaagacgaggagtcgctgaccatc
cccaatgtgaatgagggcgatgagggaacatacacctgcactgttaaatctgagatagac
caggactcagcctcagcccgcctcactgtgttagaggaagcctccctcaacccctcagtc
tctagtgccttgcctccagaccgtccagaccctcccatggatctggatctgtcggaccca
gcagcccgcagcgttcgcctcacctggatccccggaaacgaccacaggagcccaatcaca
cagttcttggtccagtttgaggaggaccgctgggagccgggcaagtggcaggacctgtcc
acgtaccccggagacctcaactcagtcatcctgcagctcgccccctttgtcaactaccag
ttcagggtcatcgccataaacaaagtgggccagagtcagcccagcggcccctcgccacga
tacaagaccagcggagctgccccagatgccattcccagaggtctacgaggatggggctcc
aagaaggacaatatggagatcacctgggagcctctgcttgacctggagagaaatggccta
aacctgcactacaatgtgtggtggagacggaaggatttgggagaggagtggagtaatgtg
accacagtgcggtccaaacatgttgtccacaacacagaaacctacatgccttatgagatc
aaaatccaggccaggaatgagtttggaccaggacctgagtctaacgtggtcattggatac
tctggagaggacaagcccaccgacgctcccactgacctgcgggtgtcaaaggtcgacagc
accaaggcgaacattcactggaagcctgtagacccagactctgtgcagggagagttcaag
gagtacagactgtgctactggcgcgagtccagtctggttccaggtctggtggtcagtaag
gagaagaagaccaaaggtttctacagcaccatggccgagccgtctggcattctcagcgac
ctggtgccctactctaaatacaagatgttcatggttgtggccaacaaccgctttgagagt
ccacccagcaacacggtggaattcaccaccaaggagggagtgccagatgctccgaggttc
ttcaggattaaccggagaagtttcgacaccgtccacctcgaatgggacaaacctctggag
cccaatggcattctgattggataccagctcaagtaccaaacagtcaatggctccaggttg
ggtcgtccccagttggagactttacttcctaatgtgacagagttcaccctccgcctgcct
gaccgatctacccgctacaagttctacctgtcagcactcacccaggtgggagcaggggag
gtctatgctgaggagtccccacacttcgccaatgaagaaaactttactgatgctacaggt
ctagtcgagcttaccgacgcctccgtggcttcagcttttactcctactcctcctcctctt
gctcctcttcctcctactaccatcgctcctacaaccattagtacctcaacttctaccact
cctacagctacaacctctactactactactactactactactactactccttctaccacc
accactacaactgaggcgaccactaccatcacacctcctgtgctggtcaccaccaagcat
actgatcagaacgtgttggtggcccctgggcgggagatctcgaatctgacggtggagcct
aacagtaactacgctaacgtcagctggagacacaacttcccggccggcagcagcgagttt
gtgctagagttcacactggacagcaacaagacggtgaaagttgtaccggtgaaacaacag
ccccccattacagtggcggatctgatcgcaggcgccaagtaccatctgagggtttactcc
catgagctcaacagcgtcagcagcaaatctgtcacctttaagaccaaagcagcctacata
gaccaggtagacatagccactcaaggctggttcattggcttgatgtgtgccatcgccctc
attatactgatcctcctcatcgtctgcttcatcaagaggagtcgcgggggcaaataccca
gtccgtgacaaaaaagatctccccttggaccaagtagatcagaaagaccaggagggatcc
tttgattaccacagcgatgaggacaacaagcctctgcagggcagccagacatcgctggac
ggcaatgtgaaggaaagcgacgacagcctggtggactacggcgagggtggcgatggccag
ttcaacgaggatggctctttcatcggccagtacactgtgaagaaggacaaggatgagacg
gagggcaatgagagctctgaggccacctcgcccgtaaatgccatctactcgctggcatag
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