Siniperca chuatsi (mandarin fish): 122883782
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Entry
122883782 CDS
T08948
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122883782 (dhx35)
Enzymes [BR:
schu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122883782 (dhx35)
Spliceosome [BR:
schu03041
]
Complex C
Other components
Complex C specific factors
122883782 (dhx35)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
ABC_tran
AAA_19
nSTAND3
Cas3-like_C_2
AAA_30
AAA_7
Motif
Other DBs
NCBI-GeneID:
122883782
NCBI-ProteinID:
XP_044068862
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Position
LG10:19052711..19061543
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AA seq
699 aa
AA seq
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MAAPLSTMKFWKPGSEAPGISEERELNTETTGSPVIFNPHTALSIEKQRQKLPVFKHRNN
ILYLVESYQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAISVANRVAE
ERGAPLGHEVGYTIRFDDCSDPHSTRIKFLTDGMLVREMMADPLLKKYSVLMLDEAHERT
LYTDIAIGLLKKIQKKRRDLRLIVASATLDAKKFHDFFNLNESGDPNKDTCGILTVEGRT
FPVDVFYTVSPVPDYVKATVETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQDQARSLS
RYGMKKHLRILPMYSGLPYAEQMKVFERVPPSVRKVVVATNIAETSITINGVVFVIDCAF
VKLRAYNPCTAIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDFEKLPASTVPEM
QRTNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDHYGRLTDPMGVR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIAAMMQIQNIFVVPPNQKKAAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKSSQWCQEHFLNYKGLLRAVTVREQLRHLMNKFKVPRTSSEGD
PDVILKCIVFGFFANAARIHHSGSYRTLRDDRELHIHPNSVLFGEKPPKWVVFNEVVQTS
KYFMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccctttccacgatgaaattttggaagccggggtctgaggcaccggggatc
tcagaggagcgcgagctcaacacagagaccaccggctcccccgtcatcttcaacccgcac
accgccctctccatagagaaacaacgacagaaactccccgttttcaagcacagaaacaac
atcttatacttggtggagagctaccagactgtcatcatagttggtgagacgggatgtggg
aagacgacacagatacctcagtacctgctggaggctggctgggcagcggaggggaaggtg
attggtgtgacacagcctcgacgtgtggctgccatctctgtagctaaccgtgtagcagag
gagcggggggccccgctgggacatgaggtgggctacaccatccggtttgatgactgctct
gaccctcactccacaaggatcaagttccttacagatggcatgctggtgcgggagatgatg
gctgatcctcttttgaaaaaatacagtgtgttgatgctagatgaagcacatgagagaacc
ctgtatacagacatagccattggtctactaaagaagattcagaaaaagcggcgagacctg
aggctgattgtggcctctgccactctggatgccaagaaattccatgacttcttcaaccta
aacgagtccggggatcccaacaaggacacgtgtggcattctgacagtggagggacgcacc
tttccagtggacgtcttctacactgtcagtcctgtcccagactatgtgaaggccacagtg
gagacagtgctgaagatccatgagacagaggatgacggagatgtcctggcttttcttact
gggcaggaagaggtggagaaagtggtgtccctcctgcaggaccaggccagatctctgtca
cgatatggcatgaagaaacacctgagaattttgcccatgtattctggtctaccttacgct
gagcagatgaaggtctttgagagggtgcccccctctgttcgcaaggttgtggttgccact
aacatagctgagacctccatcactataaatggagttgtatttgtcattgactgtgcgttt
gtgaagctgcgagcctataatccttgcactgccattgaatcgctggtggttacccccatc
tccaaggcttcagccagccagagggctgggagagccggacgaaaccgacctgggaaatgc
tttagactatacacagaggaggactttgagaaactgcctgcctccactgtgccagagatg
cagcgcaccaatttggcccctgtcatcctgcagctcaaagcattaggaattgacaatgtg
ctgcggttcagcttcctttctcctcctccagctcagaccatggttcaggctctagagctg
ctctacgctctgggaggtctggaccattacggccggttgactgatcccatgggtgtgcgg
atggcggagtttcctctcagccccatgtttgccaagatgctcctagagtcaggaaacttt
ggctgctccaaagagatcgttaccatagcagcaatgatgcagattcagaatatatttgtt
gtgccacccaatcagaagaaagctgccgcccgagagcacaggaaatttgcagttgctgag
ggagaccacctcaccatgctgaatgtgtatgaagcattcattaagcaccagaagagctcc
cagtggtgtcaggaacacttcctcaattataagggtctgctgcgggctgtgactgtacga
gagcagctccggcacctcatgaacaagtttaaggtaccacggacttccagtgaaggtgac
ccagatgtgatcttgaagtgcattgtatttgggtttttcgctaacgcagcccgcattcac
cattctggttcctaccggactttacgagacgatcgcgagcttcacatccaccccaactct
gtgctgtttggagagaaacctccaaaatgggttgttttcaatgaagtggtgcagacgtca
aaatacttcatgcgtgatgtgactgctgttgagtcgtcctggttggttgagttggcccct
cacttttacaagcaggccaagcatggttcactggccagcaagaggtcccgggtcctctaa
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