Siniperca chuatsi (mandarin fish): 122883915
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Entry
122883915 CDS
T08948
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122883915 (zswim8)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
122883915 (zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Ribosomal_L24e
Motif
Other DBs
NCBI-GeneID:
122883915
NCBI-ProteinID:
XP_044068968
LinkDB
All DBs
Position
LG11:complement(533562..581381)
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AA seq
1984 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRIRAVKDPLQIGFHLSATVVSSQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIISWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTMSPCRRLELAGQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCFFNWEVAY
PLDGITYCSADKKSATFCWSRAVQLQRGAKAAAGGGGEPSEPGGGVRVEGGAGGDYKGRG
SGHSSQQEVAVRPKETILTKRKGLSVSGGGGMLVRLGGSVSLSLEDGGGKCMYKGPGSST
GGKLKLTQGGGKGASVGGPGGSGGLGGGKHASAKRRTSSEDSSLEPDLAELSLDDGCSLA
LGAEASNTFEFLPPPPEMLPSPSPLLRDSRKYSSSNGGSKMFETKHVGHASAVLPAAEPA
PPCFPSKETVVLVMDMPSAAEKEAELEVEPVQNRDEDVDSAGSAQPSTATARSGTTQTSA
KQPRSRREPVSAVPAAGSGAAAAGGLANQGAEAAVGAAGGESVGEDDYQAYYLSAASEEG
ADRQLADNHQEEEPDIFAGMKPLEQEGRMEVLFACAEALHAHGYSNEACRLAVELATDLL
ANPPDLKVEQPQTKGKKSKVSTSRQTQVATNTLSKAAFLLTVLSERLELHNLAFSTGMFS
LELQRPPASTKALEVKLAYQESEVVALLKKIPLGLVEMSAIRERAEQLRDGNFCDYRPVL
PLMLASFIFDVLCTPVCAVVSPTGSRPPSRNRNNEMPGDEELGFEAAVAALGMKTTVSEA
EHPLLCEGTRRVKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQTLSSFYSSKPA
GGSQRSPSKHTAAGHSGVSGATGGVSKHTPSSSSVTTVAASSSSSSSAVALAGEEVAHQA
ELNPVQNSSAGESTAETREHVSDGPPSSSDQQNETAPYKLEATVPSRLALGARCGYSQRC
WGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAATSWGRGQDSDSISSSSS
DSLGSSSSSGSRRAGGGARAKSTDTSRAMMGYERTYRTGVTSRYKGRRPECHAPHVPNQP
SEAAAHFYFELAKTVLIKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHN
FVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDPN
MVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNVMLEKACMAVEEAAKGGGVYPEVL
FEVAHQWYWLYEQSVGGGSGPQRETSGRCGANGGSGRRLPESSCGVLDSGVNMESPGMAT
VTASVTAAAVVPVISVGSTIYQSHAMPGQAMAHPHSQGLHPYTTIQAHLPTVCTPQYLGH
PLQHVPRPTVFPVSGAAYPQGMHPAFIGAQYPFSVATGPQPPMAATAVTFPGVPVPSMTQ
IAVHPYHTETGLPLSTTVAVGSVHSGPTIQAIQGASLPSLSSQPGSLVSTPFPAEDEQHS
QPISQQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAARLGVN
YVYQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYIH
HRLIHLTPADYDDFVNIIRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQRISLEMA
TFSP
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgttcgccgagtgggaggatggggagaggttctccttcgaagactcggac
cggttcgaggaagactctctgtgctccttcatctcagaggccgagagcctctgtcagaac
tggaggggatggaggaagcagtccgctggacccaactccccaactgtcaagattaaagat
ggccaggtgattccactggttgagttgtcagcgaagcaggtagcgttccacatcccgttt
gaggtggtggagaaggtctacccccctgtcccggaacagctccagctccgcatcgcctac
tggagcttcccagagaatgaagaggacatcaggttatattcctgcctggctaatgggagt
ccagatgaattccaacgtggagagcagctctacaggatcagagcggtcaaagaccccctg
cagatcggcttccatctcagtgctacagtggtatccagtcaggccggtcaatccaaagga
gcctacaacgtggcggtcatgtttgatcgctgccgcatcacttcctgcagctgtacctgt
ggtgctggggccaaatggtgtgcccatgtggtggcactctgcctcttccggatccacaat
gcatcagcagtgtgtctgagggctccagtctctgagtctttgtccaggctgcagagggac
cagctccaaaagtttgcccagtacctcatcagtgagctgcctcagcagatcctacccaca
gctcaacggctgctggatgagctgctgtcctctcagtctactgccatcaacactgtatgt
ggagctccagaccccacagcaggcccttcagcgtctgaccagagcacctggtatttggat
gagtcgacgctcagcgacaacatcaaaaagactctgcacaagttctgtgggccttcacct
gttgtcttcagtgatgtaaactccatgtacctgtcgtccacggagccgccagccgctgct
gaatgggcgtgtctgctgcgacctctgaggggcagagagccagaaggcatctggaacctt
ctgtccatcgtcagggagatgttcaagagacgagacagcaacgctgccccactgcttgag
atcctcactgagcagtgcctcacctacgaacagatcatcagctggtggtacagtgttcgg
acctcagcatcccacagcagtgccagtggccacacagggcgcagcaacggccaatcagag
gtggcggctcatgcctgtgccagcatgtgtgatgagatggtggtgctatggaggctggca
gtgctcgaccccactatgagcccctgcaggcgtctggaactggcaggccagctgaagcag
tggcacctgaaagttatagagatagtgaagcgtggacagcatcgcaagtccctggataaa
ctgttccagggcttcaagcccgctgtggagtcctgctttttcaactgggaggtggcctac
ccactggatggcatcacctactgcagtgctgataagaagagcgccacattctgctggtcc
agggcagtgcagctccagagaggagccaaagctgctgcaggagggggtggagaaccttct
gaaccagggggaggggtgagagttgaaggtggagctgggggagattataaaggaagagga
agtggtcactcatcccaacaggaggtggcagtgcgacccaaagagaccatactgaccaag
aggaagggtctgtcagtgagtggagggggagggatgctggtccgtctgggagggagcgtc
tctctgtccctggaagacggaggagggaagtgcatgtacaaagggccgggctcctccact
ggagggaagctgaaactgacacagggaggtgggaagggggcatctgtaggaggtccggga
ggaagtggagggttaggaggtggaaagcatgccagtgccaagcggagaaccagcagtgag
gatagctccctggaaccggacctggctgagctcagtctggacgacggctgtagtctggct
ctgggggcggaggccagtaacacttttgagtttctccctccgcctccagagatgctgccc
tccccaagtccactgctgcgagactcacgcaagtacagcagcagcaacggtgggagcaag
atgtttgaaacgaagcatgtcggccatgcctcagctgtacttcctgctgcagagcctgct
ccaccttgcttcccttccaaagagacggtggttcttgttatggacatgcccagtgctgca
gagaaggaagcagagctggaggtggagcctgtacagaacagagatgaagatgtagactct
gctggcagtgcccagccttccaccgctacggcacggtcaggcaccactcaaacgtctgcc
aagcaaccacggagccgcagagagccggtgtctgctgtacccgcagcagggagtggggca
gcagctgcaggtggactagcaaaccaaggagcagaggcagcagttggagctgcaggagga
gaatctgtgggtgaggacgactatcaggcatactacctgagtgctgcctcagaggaggga
gcagacagacagctggctgacaaccaccaggaggaggaaccagacatctttgcagggatg
aaaccactggagcaggaggggcgcatggaggtgctgtttgcgtgtgcagaagccctccat
gctcatggctacagtaatgaggcgtgccggctggccgtggagctggccacagacctgtta
gccaaccctccagacctgaaagtggagcagccacagactaagggtaagaagagcaaggtg
tcaaccagccgtcagacgcaggtagccactaacacgctgtcaaaagccgccttcctcctc
actgttctcagtgaacgactggagctccacaacctggccttcagcaccggcatgttctcc
ctggaactccagagaccaccggcatctaccaaagctctggaggtgaagctagcctaccag
gagtcggaggtggtggctctgttgaagaagattcctctgggcctggtggagatgtcagcc
atcagagagagagccgagcagctcagagacggaaacttctgtgattacagacctgtgctg
cctctgatgttggccagcttcatctttgatgtgctgtgtaccccagtttgtgcagttgtt
tccccaacgggttcccgtccaccaagccgcaaccgtaacaacgagatgcctggcgatgag
gagctgggctttgaggctgctgtcgctgcactcggtatgaagaccacagtaagtgaggcg
gagcatcctctgctgtgtgaaggaactagacgggtgaaaggtgacctggctctggctctc
atgatcacctataaggatgaccagagcaagctcaagaagatactagacaagttgttggac
agggagagtcagacccacaagccccagaccctgagctccttctactccagcaagccagca
ggtggcagccagcgcagcccatccaaacatactgccgccggccacagtggggtgagcggg
gccaccggaggtgtctccaaacacacaccctcatcttcgtctgtgaccactgtagcggcc
tcttcttccagctcttcctctgctgtggcactggctggtgaagaagtggctcatcaggct
gaactgaacccagtgcagaacagttcagcaggggagagtactgctgagaccagggagcat
gtatcagatgggcctccttcatcaagtgaccagcagaatgaaacagctccgtataagctg
gaggccacagtgcccagtcggctggcgctgggtgcgcgctgtggatacagccaacgctgc
tggggctcacctgtccggcagaagaagaaacacactggcatggcgagtatcgacagcagt
gctccggagacaacctccgacagttcgcccactctcagccggcggccgctccggggcggc
tgggcagcaacatcttgggggcggggccaggacagtgacagcatcagcagttcatcatct
gattcgctgggctcctcctcctccagcggctctcgcagggcagggggcggagccagggcc
aagagcaccgacaccagcagagcgatgatgggctatgaacgtacttatagaactggagtc
acatccaggtacaaagggcgacgtccagagtgccacgccccccacgtgcccaaccagcca
tcagaggcagcagctcatttttactttgagctggccaagacagtgctgatcaaagctgga
ggaaactcctccacctccattttcacccagccctcagccagtgggggccaccaggggccc
cacagaaacctgcacctgtgtgcctttgagattggcctgtatgctcttggcctccacaac
tttgtctcacccaactggctgtccaggacctactcctcccatgtgtcctggatcactggc
caggccatggagatcggcagtgctgccctcaacattttggtggagtgttgggacggtcac
ctcacccctccagaggtggcatccctggctgaccgagcatcgcgagccagggaccccaac
atggttcgggcggcagcagagctggccctgagctgcctgcctcacgctcacgccctcaat
cctaatgaaatccagagggccctggtgcagtgcaaagagcaggacaatgtgatgctggag
aaggcctgcatggcggtagaggaagcagccaagggtggaggtgtgtaccctgaggttctc
tttgaggtggctcaccagtggtactggctgtatgagcagtcagtgggcgggggctcaggc
ccacagcgggagacctctgggcgctgtggggccaacgggggttcgggcaggaggctcccg
gagtccagctgtggtgtccttgacagcggagtcaacatggagtctccggggatggcgaca
gtcacagcctcagtcactgcagcagccgtcgtacccgtcatctctgtgggctccaccatc
taccagtcccatgctatgcccgggcaggccatggctcacccccacagccagggcctccac
ccgtacaccaccatccaggcccatctccccaccgtctgcaccccccagtacctgggacac
cctctgcagcacgtcccccgacccaccgtcttccctgtgtctggggctgcgtatccacag
ggaatgcacccagcctttatcggtgcccagtacccgttctcagtggccactggcccccag
ccacctatggcagccacggctgtgacgttccctggtgtccctgtaccgtccatgactcag
atcgccgtccatccctaccacactgagaccggcctgcccctcagcaccactgtagcagta
ggcagcgtccactcaggccccaccatccaggctatacagggagcatctctgccctccctc
tcctcccagcctggctcattggtcagcactcctttcccagcagaggacgagcagcacagc
cagccaatcagccaacagggcctgcactacctgcattctgcttacagagttggcatgctg
gcattggagatgctgggcaggagggctcacaatgaccaccccaacaacttctccaggagc
cccccttacactgaggacgtcaaatggctgctgggactggctgcaagactaggagtcaac
tatgtgtaccagttctgtgtcggagcagcaaaaggtgtcctcagtccattcgtcttgcaa
gagatcatcatggaggctctgcagaggctgaaccctgcccacatccacgcccacctccgg
acacctgctttccaccagctcgtccagcgctgccaacaggcctacctgcagtatatccac
caccggctcatccacctgacgcctgccgactacgatgactttgtcaacatcatccgcagc
gctcgaggtgctttctgcctgacacccgttggtatgatgcagttcaacgacgtgctgcag
aacctgaagagaggcaagcagaccaaggagctgtggcagcgcatctccctggagatggca
accttctccccctga
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