Siniperca chuatsi (mandarin fish): 122883971
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Entry
122883971 CDS
T08948
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122883971 (hps1)
Membrane trafficking [BR:
schu04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
122883971 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
AraC_binding_2
Motif
Other DBs
NCBI-GeneID:
122883971
NCBI-ProteinID:
XP_044069123
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All DBs
Position
LG11:complement(14878636..14887748)
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AA seq
690 aa
AA seq
DB search
MKCLLIASESAEVLFHWTDPEFQQSIQEQYGASQEEGQGLPAFEDSISTLFAPIIISCST
MVDRLGDSYTSFTTENNHIYVLHQFDECLYIAVNGDGEEGEDDLRRKIYVMKKMIEVLFG
MVTLSSNLLRKELRPQDTEQRARLWKHLQSLLETYSHLRENDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQLNSSVERAGEEVLHAFILVHTKLLAFYSSRNASTLATSDLLALIIMA
QNMYPSNVDQDDPGPEDVESTSGSGPESFYTPEPSPTDRDSSSSGADKPVRGSTPVFEFV
DPDIQMAEDSLQTLEVPPPDSSTPRRVFLEVSLKEGLYPMMPHSMYCLPLWPGITLVLLT
KIPTSAVAMSVYKFLEAFAKLEMRLSEGQEGSAATRGQPTIHDVRSKLDKFIKALGPSEI
QSAQLQNVWTEFKNRAFARGGPGFNKDLIPWCKNMKTQLCGIYRQCFLIDSGPADIPRCL
SPSLQERAQTMVQEKLMDWKDFLLVKCKRNITMVSYPVSKIILLPDFPGLIHFICVDRST
GQMIAPSLNITERATSELGKGPVAQFIKNKVWSLVSTTRRYLQKGYSTVTLRDGDFYFCY
FLWFENETGYKLEAGDIPILPDDSAPIGMLAWDYYSRKLLRYYSKNHQGEVVKCYELLTV
HLGVIPTEIILQHCRQLASKLWEPSRNPLL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcttgctgatcgccagtgagagcgcagaggtcctcttccactggactgaccca
gagtttcagcagagtatccaggagcagtatggggcttctcaagaggaaggccaggggctg
ccagcctttgaggacagcatcagcaccctgtttgcccccatcattatctcctgcagcacc
atggtggacaggctgggtgacagctacacctccttcaccaccgaaaacaaccatatctac
gtcctacaccagttcgatgagtgtctctacattgctgtgaatggagatggtgaggaggga
gaggatgatctgaggaggaagatctatgtgatgaagaagatgattgaggtgctgtttggc
atggtcaccctcagcagtaacctcctcagaaaagagctgcgtcctcaggacacggagcaa
agagcgagactgtggaagcatctgcagagcctgctggagacctacagccacctccgagag
aacgaccagagcttcttagtggaggcagtggagaggctgatccaccccacactgtgtgag
cagtgcatcgagttcctggagcgccgtttagttcagcagctcaacagcagcgtggagaga
gcaggagaggaggtgctgcatgccttcatcctggttcacaccaaactgctcgccttctac
tccagccgcaatgcgagcacactcgccacctctgatctcctggccctcatcatcatggca
cagaatatgtatcctagcaacgtagaccaggatgacccaggtcctgaggatgttgagagt
acatccggttctggtcccgaaagtttctacaccccagagccctcccctacagacagagac
tcaagcagttcaggtgcagacaagccagtgagaggaagtactcctgtgtttgagtttgtg
gacccagacatccagatggcagaggacagcttgcagactctggaagttcctccacctgac
tcttccacccctcgtagagtcttcttagaggtctcactcaaagaggggctgtatcccatg
atgcctcactccatgtactgtctgccactgtggcctggcatcacactagtgctgctaact
aagattcccaccagtgcagtggccatgtcagtgtataagtttttggaggccttcgccaag
ctggagatgcgtttaagtgaaggccaagaaggatctgctgctactagaggccagccgact
atacacgacgtccgcagcaaactggataaattcattaaagcactggggcctagtgagata
cagtctgcacagttacagaatgtctggacagagttcaagaaccgagccttcgccagagga
ggacctgggttcaacaaagatcttatcccatggtgtaagaatatgaagacccagctgtgt
ggaatatatcgacagtgttttcttatcgactctggaccagccgacattcctcgctgtctc
tcccccagtctgcaggaacgagcccagaccatggtgcaagagaaactgatggactggaag
gacttcctgttggtgaaatgcaagaggaatatcaccatggtgtcatatcctgtcagcaaa
ataatcctactccctgatttcccgggcctcatccattttatctgcgtggaccgatccact
ggccaaatgattgcgccgtcgctcaacatcacagaacgcgccacatctgagctggggaag
ggaccagtggctcagttcatcaaaaacaaggtgtggagcctggtcagcacaacacggcgc
tacctccagaaaggttactccactgtcacattgcgcgatggagacttctacttctgctac
ttcctctggtttgaaaatgaaactggctacaaattagaggcaggggacatacccatccta
cctgatgactctgcccccattgggatgcttgcctgggactactacagcaggaagctgctg
cggtactacagtaagaatcaccagggagaggtggtgaagtgctacgagctgctgacagtt
cacctgggggtcatccccaccgagatcatcctgcagcactgcaggcagctggcaagcaaa
ctgtgggagccttcgcgcaatccactgctgtag
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