Siniperca chuatsi (mandarin fish): 122883985
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Entry
122883985 CDS
T08948
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122883985
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122883985
Enzymes [BR:
schu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
122883985
Membrane trafficking [BR:
schu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
122883985
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
122883985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_22
TIP49
AAA_5
AAA_16
AAA_14
MIT
Mg_chelatase
AAA_24
IstB_IS21
AAA_2
NPHP3_N
nSTAND3
DUF815
Motif
Other DBs
NCBI-GeneID:
122883985
NCBI-ProteinID:
XP_044069165
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All DBs
Position
LG11:complement(10295297..10299252)
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AA seq
479 aa
AA seq
DB search
MSAKMNASKSKDSGEVIKSYHKQAFEYVSKALRIDEDDTGDKEQAVLWYKKGIAELERGI
AVEITGQAGDQYDRAKRLQDKMVANLTMAKDRLALLEATLASKRRSDPQKTSNHALPQPK
PAPKSHPAVRGVSTNTRPTPAVRPPSRPADPKVTPRGGKAQNGKPAAVKQPPKKDMKNFK
NVDSKLANLILNEIVDSGASISFDDIAGQELAKQALQEIVILPALRPELFTGLRAPARGL
LVFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSVI
FIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSGGDDRVLVMGATNRPQELDEAVLR
RFAKRVYVALPDEETRFTLLKNLLGKQGNPLSKNELSYLAKETAGYSGSDLTSLAKDAAL
GPIRELGPDQVRSMAASKVRNINKKDFEDSLKRIKPSVSPRTLDMYTKWNNDFGDTTAF
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaaaatgaacgcaagtaaaagcaaagacagcggtgaagttattaaaagctac
cataagcaggcgtttgagtatgtatcgaaggctttaaggatcgacgaagatgatacagga
gacaaggagcaggctgtgctgtggtacaagaaagggattgctgagcttgaaaggggtatt
gcagtagagatcacgggacaagcaggagatcaatatgaccgagcaaagagacttcaagat
aaaatggtcgccaatctcaccatggcaaaagataggcttgcccttctagaggcaacattg
gcctctaaaaggagaagtgatccccagaagacctcaaatcatgctcttccacaaccaaag
cctgcgcctaaaagccatcctgcagtgcgaggtgtgtccacgaacaccaggcccacccct
gctgtcagacccccatctagacctgctgatccaaaggtgaccccacggggggggaaagct
caaaatggaaaacctgcagctgtgaaacagcccccaaagaaggatatgaaaaacttcaag
aatgtggacagcaaactggccaacttgattctgaatgaaattgttgacagtggagcatct
atatcctttgatgacatcgcgggacaggaactggccaagcaagcactccaggagattgtc
atcctccctgccttaagaccagagctctttactggcctgagagctccggcacgtggtttg
cttgtgtttggcccgcctggaaatgggaaaaccatgctggccaaagcagtcgcagccgag
tcaaatgccacattcttcaacatcagcgctgccagtttgacatctaaatatgtgggagag
ggcgagaagcttgtacgagcgctgtttgcagttgccagagaattacagccctctgtcatc
tttattgatgaagttgacagcttgctctgtgaaaggagggagggagaacacgacgcctct
cgtcgattaaaaaccgagttcctcattgagtttgatggggtgcagtcaggaggggatgac
agggtgctagtaatgggagcaaccaacaggcctcaggagctggatgaagctgtactgagg
cgctttgcaaaaagggtttatgtggcgctgccggatgaggagacacgattcacgctgctg
aaaaatcttttgggaaagcaagggaatccactgagcaaaaatgagctgtcctatcttgcg
aaagagactgcaggatattcgggaagtgatctcacgtcactagccaaagatgctgcactc
gggccgattagagagttgggaccagaccaagtccgaagtatggctgctagtaaggtgcgt
aacatcaacaagaaagactttgaggattccctgaagcgcattaagcccagtgttagccca
cggactcttgatatgtataccaaatggaacaacgattttggtgacacaacagctttttga
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