Siniperca chuatsi (mandarin fish): 122884262
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Entry
122884262 CDS
T08948
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
schu04054
]
122884262
Pattern recognition receptors [BR:
schu04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122884262
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_4
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
122884262
NCBI-ProteinID:
XP_044069868
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All DBs
Position
LG11:complement(29087915..29121358)
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AA seq
1130 aa
AA seq
DB search
MDQSEDRQEGVPPSKTTLCGEHDTRTEAQRIHQRPEPEPSCVSMKSDRSMRRPTVFKDGR
HSVDQRVDQESSEVPSGQSELKIHQIPDCPEPEPSCVSMKSDRSMRHPVHFKDGRHSVDQ
RVDQESSEVPSGHQTHLDAMFMLLEENIVTFVKNELKKIQKFLSSDYPECSESQREDEEV
LDGEEEEQRRSSREAFLNITLHFLRRMKQEDLADRLQIRYPVPVCFQHKLKSNLKNKFQC
VFEGIAKAGNPTLLNQIYTELYITEGGTAEFNDEHEVRQIETASRRPDRPETTIRHEDIF
KPSPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIQFTFPFTFRELNVLKQK
KFSLVELVHHFFTETKEAGICRFEEFHVVFIFDGLDECRLPLDFHNNEVLTDVTESTSVD
VLLTNLIRGYLLPSARLWITTRPAAANQIPPECVDMVTEVRGFTDPQKEEYFRRRFRDKK
QTSRIISHIKTSRSLHIMCHIPVFCWITATVVEDVLKTSEGGKLPKTLTEMYIHFLVVQS
KLKNVKYDGGAEMDPHWSPENREMIESLGKLAFDQLQKGNLIFYESDLTECGIDIRAASV
YSGVFTQIFREERGLYQDKVFCFVHLSIQEFLAALHVHVTFINSGVNLLSDKQTTSQKSE
TRKDESAVTYFYQSAVRKALQSPNGHLDLFLRFFLGLSLQTNQILLRGLLTQTGSSSQTN
QETVHYIKMKITKNLSPEKSINLFHCLNELNDHSLVEEIQRSLSSGSLSTNKLSPAQWSA
LVFLLLSSEKDLDVFDLNKYSASEEALLRLLPVVKASNKALLSGCNLSEKSCEALSSVLS
SQSSSLRELDLSNNNVQDLGVKLLSAGLESPHCRLETLRLSGCLITEEGCASLASAVSSN
PSHLRELDLSYNHPGDSGVKLLSAGLEDPHWRLGTLRAEPGGVRWLRPGLRKYSCELTLD
TNTVHRNIKLSDDNRKATQVEEKLSYPDHPDRFDHWSQLLCRNGLTGRCYWEVEWRGSVD
ISASYRGIRRRGNSDDCVFGGNDQSWSLICSDGGYTVWHNNRKTPITTSSSSSGRVAVYV
DCPAGTLSFYRVSSDTLIHLHTFNTTFTEPLYPGFGFWSRSGSLVSLCSL
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggatcagagtgaggacagacaggagggagtccccccctctaaaaccactctgtgtggg
gaacatgacacgaggaccgaagctcagaggatccatcagagacctgaacctgaacccagc
tgtgtgtccatgaagagtgaccggtctatgcgtcgtcctacagtcttcaaagatggacgc
cactctgttgatcaaagagtcgaccaggagagctcagaggttcccagtggtcagtctgag
ctgaagatccatcagataccagactgtcctgaacctgaacccagctgtgtgtccatgaag
agtgaccggtccatgcgtcatcctgtacacttcaaagatggacgccactctgttgatcaa
cgagtcgaccaggagagctcagaggttcccagtggtcatcaaacacatttggacgccatg
tttatgctgctggaggagaacattgtcacttttgtgaagaacgagctgaagaaaatccag
aagtttctgagttcagattacccagaatgctctgagagtcagagggaggatgaggaggtg
ttggatggtgaggaggaagagcagaggaggagcagcagagaggcatttctgaacatcacg
ctgcacttcctgaggagaatgaagcaggaggatctggctgaccgtctgcagatcagatat
cctgttccagtttgtttccagcataaacttaaatctaacctgaagaataagttccagtgt
gtgtttgaggggattgctaaagcaggaaacccaacccttctgaaccagatctacacagag
ctctacatcacagagggagggactgcagagtttaatgatgaacatgaggtcagacagatt
gaaacagcatccaggagaccagacagaccagaaacaacaatcagacacgaagacatcttt
aaaccctcacctggaagagatgaaccaatcagaacagtgatgacaaagggagtggctggc
attgggaaaactgtcttaacacagaagttcactctggactgggctgaagacaaagccaac
caggacatacagttcacatttccattcaccttcagagagctgaatgtgctgaaacagaaa
aagttcagcttggtggaacttgttcatcacttctttactgaaaccaaagaagcaggaatc
tgcaggtttgaagagttccacgttgtgttcatcttcgacggtctggatgaatgtcgactt
cctctggacttccacaacaatgaggtcctgactgatgttacagagtccacctcagtggat
gtgctgctgacaaacctcatcagggggtacctgcttccctctgctcgcctctggataacc
acacgacctgcagcagccaatcagatccctcctgagtgtgttgacatggtgacagaggtc
agaggcttcactgacccacagaaggaggagtacttcaggaggagattcagagataagaag
cagaccagcagaatcatctcccacatcaagacctcacgaagcctccacatcatgtgccac
atcccagtcttctgctggatcactgctacagttgtggaggatgtgttgaaaaccagcgag
ggtggaaaactgcccaagaccctgactgagatgtacatccacttcctggtggttcagtcc
aaactgaagaacgtcaagtatgatggaggagctgagatggatccacactggagtccagag
aacagggagatgattgagtctctgggaaaactggcttttgatcagctgcagaaaggcaac
ctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcctcagtg
tactcaggagtgttcacacagatctttagagaggagagagggctgtaccaggacaaggtg
ttctgcttcgtccatctgagcattcaggagtttctggctgctcttcatgtccatgtgacg
ttcatcaactctggtgtcaatctgctgtcagacaaacaaacaacttcccagaagtctgaa
acaagaaaagacgaatctgcagtgacatacttctaccagagtgctgtgagaaaggcttta
cagagtccaaatggacacctagacttgttccttcgcttcttcctgggcctttcactgcaa
accaatcagattctcctacgaggtctgctgacacagacaggaagtagttcacagaccaat
caggaaacagtccattacatcaagatgaagatcactaagaatctctctccagagaaaagc
atcaatctgtttcactgtctgaatgaactgaatgatcattctctggtggaggagatccaa
cggtccctgagttcaggaagtctctccacaaataaactgtctcctgctcagtggtcagct
ctggtcttcctcttactgtcatcagaaaaggatctggacgtgtttgacctgaacaaatac
tctgcttcagaggaggctcttctgaggttgctgccagtggtcaaagcctccaataaagct
ctactgagtggctgtaacctctcagagaaaagctgtgaagctctgtcctcagttctcagc
tcccagtcctctagtctgagagagctggacttgagtaacaacaacgtgcaggatttagga
gtgaagctgctgtcagctggactggagagtccacactgtagactggaaactctcaggctg
tcaggctgtctgatcacagaggaaggctgtgcttctctggcctcggctgtgagctccaac
ccctcccatctgagagagctggacctgagctacaaccatccaggagactcaggagtcaag
ctgctgtctgctggactggaggatccacactggagactgggcactctcagggcggagcct
ggtggagtccgatggctgagaccaggtctgaggaagtattcctgtgaactcacactcgac
acaaacacagtacacagaaacatcaaactgtctgacgacaacaggaaggcgacacaggtg
gaggagaagctgtcatatcctgatcatccagacaggtttgaccactggtctcagctgctg
tgtagaaatggtctgactggtcgctgttactgggaggtcgagtggagaggaagtgttgat
atatcagcgagttacagaggaatcagaaggagaggaaacagtgatgactgtgtgtttgga
gggaatgatcagtcctggagtctgatctgctctgatggtggttacactgtctggcacaat
aacagaaaaacacccatcaccacctcctcctcctcctctggcagagtagcagtgtatgtg
gactgtcctgctggcactctgtccttctacagagtctcttctgacacactgatccacctc
cacaccttcaacaccacattcactgaacctctttatcctggctttgggttttggtccagg
tctggttccttagtctctctgtgttctctgtag
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