Siniperca chuatsi (mandarin fish): 122884395
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Entry
122884395 CDS
T08948
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
schu03037
]
122884395 (cfap43)
Cilium and associated proteins [BR:
schu03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
122884395 (cfap43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
CFAP43_N
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
122884395
NCBI-ProteinID:
XP_044070209
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All DBs
Position
LG11:17655829..17672364
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AA seq
1658 aa
AA seq
DB search
MDDIGSLEVRWIQGFTNKSIEFVDNKTVCYTCGSNICFLNLKTKTRSVLQSPGRGIGALT
ANGNNRIFAFSEQKLSPSIFVYIFPAFKLKNELKGTAQLDYTSLTLSDGGPYLACCSSLP
DHTITVWNWENAETICTQPQTGHDVISLVFNPLNWLQLCALGTTSLTVWNIEKSASVHIL
KPSVIELPATDGSFVERLVLTSHTVSDTMPYFGPEMPPSAISGLKGDKAESIVTKLCTKA
RLTPTAICWTATSELYVGCAEGFLLLVDPESLSVSVLFNPTTADAIPELRESNFRGLTLN
KNGLIAVGKESVVHSLQIKGTQMYITQTWKLEGPVTTVMYSPDYETLLLSSKTGQIYMLN
STQSDKIVKVLDVLSGNFVAAALSHTDKNICVSVRDSGKLQLWSTGGICLGSLSLEAEVT
SLACCPIAQYAAVGTASGNVLFIDLNRVQQPRLVHQVHLYHTPVDHLVFDQEGHYLLTGA
SDSYIYVLDAKPSKKFSVIGYTVAPGPILSLSTQCIRNCEQVKVLALCTGQEGKNHDGSL
LTVLSLPARDLAGPDCVDRHGCLSTHILKVSRYEVPHPLKSCVLGVSEVFAYCHKKKTLQ
RFQLPQDTDGLSSQQVVQLKPEQEVKGHPLGPASLFLSPHQLWLASVGRDGLLRIRETAS
MERYVELQCHSCRLGGVRSVSFSADSETLLTAGFKDGSLVCTNFRIKGVGAGNVNKATQY
SQSMDHFLKNIFNTENPILIDLPEWGQASPAGTEKPEGSKVSGGADTVDVTEQDESYNSL
LSALPSHSTWLESRREAVIKQENEQYSETKKNLRKTFKEFRDTIQEMMRENENLPDIEHL
EEQEFNLDVEEQRRLEAMVEQEVTRVRNEIEWEILSKCYLRDVLKRECWDSLKVKGKAIK
AFHSEHEVKNYPLKERTEKEVEDLRRVQNMRKFEKAAYTLSSLKKSSNTTSVKEEEQGEK
GHEAESAAVTGSFSAQLGCSNPYIYDQFGLQTTEQRINQIILLQDVIYRIKTAFNADFEA
THRQKVQELNRVRDRNRYIREIMLELDMNEKLWEPSLTNSEQPERLLTVDDSEIKAEKYL
TPEQKKEEERKKLEEQRRLAAKGDNVRERALDDMMDGVLEVKKEDILKMEIPLPEFVLTK
TDTHWTEEEKKVYKEYEKKTKDLSEEKEKYKKSLETEMKKLQASTKDATERFDETLTKLF
EKKVKCEMAIYQEELKITYLTYSVLIEEEMRNRDLELKLKLEKTLAYKNEIGEEVKRHEE
EVELFHETYNSIVAEDKVLDKEFRKEFFDVPSHVVDHLYKLFKRRPRVQKIRTQTDNNSN
PLKEQCGGSLAPDVLGKMLKAMEELDAPENIPEGLNPSIWERFCLVRRTKVESEHEVKVK
ALTLAEMQAFLQKRRDEDKAAQQEIKNLSDELESLHKEKNRFLTDIMVQVLLKQGQVEVS
TTDLTADYTDSVLHHRSVVEDLNSAIRTLGEQKIASMVECKDFRKGIIQLQWEHKMLGMQ
IEDLNNRARDIQMLRLSEEQQDYLNKTDRDSRVSKQVSILEKTIAFQEKTHLQSVQHRIK
KIEQLNRQAAMKAEKNAIVEQQLPNMQVTVAERRHVYEAIASEEHQAAKTEERYQEIVQK
KNLEDFAKAQAENLAVLWAEVERLRRKNFPSLDQLKHN
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggatgacattggaagtttagaagtcaggtggatacaaggttttacaaacaagagtatc
gagtttgtcgacaataaaacagtatgctacacctgtgggagtaatatctgtttcctgaac
ctgaagacaaaaacgcgaagtgtgcttcagagtcctggcagaggcattggtgcattgaca
gccaatggcaacaataggatttttgctttctctgagcaaaagctatccccatctattttt
gtgtacattttcccagcgtttaagttgaagaatgaactaaaaggaacagcacaactggac
tacacatctctgacattaagtgatggtggtccttatttggcctgttgttcctctcttcca
gatcataccataacagtgtggaactgggaaaacgctgagacaatttgtacacaaccacaa
actgggcatgatgtcatttctttggtgttcaaccctctgaattggctccagctttgtgct
ttgggcaccacatctctcactgtttggaatattgagaagagtgccagcgttcatatcctg
aaaccaagtgtgattgagcttccagcaactgatggttcctttgttgagagattggtgctc
acttctcatactgtcagcgacacaatgccctattttggtccagagatgcctccatcagcc
atctcagggcttaagggagacaaggcagaaagcattgtgactaaactctgcaccaaagcc
agactaactcctactgccatctgctggacagccacatcagagctttatgtgggctgtgcg
gaaggctttctgctccttgttgacccagagagcctctctgtctcagtcctcttcaacccc
acaactgctgatgctatccctgaactcagagagagcaactttcgaggtttaacccttaac
aagaatggtttgatcgctgtaggaaaggagagtgtggtgcactctctgcaaatcaaaggg
actcagatgtacatcacacaaacatggaaattagaaggacctgtcacaactgtgatgtac
tcccctgactatgaaacattacttttatcttctaaaacagggcaaatctatatgttgaat
tcaacccagtcagacaaaattgtgaaggtcctggatgttctcagcggcaactttgtggca
gcagctttgtcacacactgacaagaacatttgtgtgtcagtgagggattctggaaaactg
cagctgtggtccacaggtggcatttgcctcggttccctgtctcttgaagctgaggtgaca
agtctggcctgctgtccgattgcacaatacgctgctgttggaacagcatcaggaaatgtc
ctcttcattgacctgaacagggtgcagcagcctcgcttggtgcatcaggttcatctctac
cacactcctgtggatcacctagtttttgatcaagaggggcactaccttctcaccggtgcc
tcagattcatatatctatgtactagatgcaaagccctcaaagaagttttcagtcatagga
tacacagttgctcctggacccattttgtcactttccactcagtgcatcagaaactgtgag
caggtgaaagttcttgcactgtgcactggacaggagggcaaaaatcatgatggtagcctg
ctcacagtgctctctctgcctgcgagggaccttgcaggtccagattgtgtagaccgacat
ggttgcctgtctactcacatcctcaaagtgtccagatacgaagtgcctcatccacttaaa
tcttgtgttctgggagtcagtgaggtctttgcttactgccacaagaagaaaactcttcag
cgatttcagcttccccaggacacagacggtctctcaagtcagcaggtggtccagctgaag
ccagagcaggaagtgaagggtcatcctctgggccctgcctctctctttctgtctcctcac
cagttatggctagcttctgtgggccgagatggcctactacgcatccgagaaactgcttcc
atggagcgatacgttgagctgcagtgtcattcatgccgtcttggtggggttcggagtgtg
tccttctctgcagacagcgagacactcctcactgctggctttaaagatggctctcttgtg
tgcactaatttcagaattaaaggtgtgggtgctggtaatgtgaataaagctactcagtat
agccagtctatggatcatttcttgaagaacatattcaatacagagaatcccatcctcatc
gacttgcctgagtggggccaagcgtctcccgctggtactgaaaaaccagagggaagcaag
gtcagtggtggagcagatactgtggatgtgacagagcaggatgagagttataacagcctg
ctgtctgctctaccttcacactccacctggctggagagcaggcgagaggcggttataaag
caagagaatgagcaatattctgagacaaagaaaaacctgaggaaaaccttcaaagagttt
cgtgacactatccaggagatgatgcgcgaaaatgagaacctcccagatattgagcatctg
gaagaacaggagtttaacctggatgttgaggagcagaggcgactggaggccatggtggaa
caggaagttactcgggtgagaaatgaaatcgaatgggagattttatcaaaatgttacctc
cgtgatgtcctaaagagagaatgctgggattctttgaaggtcaaaggcaaggccattaag
gcctttcactcagaacatgaggtgaagaactaccccctgaaagagcgaacagagaaagag
gtggaggaccttcgcagggttcagaatatgaggaagtttgaaaaggctgcttacacccta
agcagcctaaagaaaagttccaacacaaccagcgtgaaagaggaagagcagggggagaaa
ggccacgaggcagagagtgctgctgtaacaggaagtttctccgctcagttaggatgttcc
aatccttacatctacgatcagttcggcctgcaaaccacagaacagaggatcaaccagata
attctgctacaggatgtgatttatcgcatcaagacagctttcaacgctgactttgaggcc
actcacaggcagaaggtgcaggagctcaaccgtgtgagggacaggaacagatacatcagg
gagatcatgctggagctggacatgaacgagaagctgtgggagcccagcctgaccaacagc
gagcagccagagaggctgctcactgtggacgactctgagataaaagcagaaaagtacctc
accccagaacagaaaaaggaggaggagaggaagaaattggaagagcaaagacgtttggct
gccaagggtgataatgtcagagaaagggctcttgatgacatgatggatggagtgctcgaa
gtgaaaaaagaggacatcttgaaaatggaaatacctctgcctgagtttgttttgaccaaa
accgacacccactggactgaggaggagaaaaaagtctataaagagtatgaaaagaaaacc
aaagacctgagtgaggagaaggagaaatacaaaaagtcactggaaactgaaatgaaaaaa
ctgcaggcatccaccaaggatgcgactgaaaggtttgatgaaactttgacaaagctgttt
gagaagaaagtgaaatgtgaaatggctatatatcaggaagagctcaagattacttatctc
acctattcagtcctcatagaagaggagatgagaaatcgagacctggagctcaagctcaaa
cttgaaaaaacgttggcatacaagaatgaaattggggaggaggtgaagagacatgaagaa
gaagtagaattgtttcacgagacctataacagcattgtagctgaggacaaagttcttgac
aaagaattcaggaaggagttctttgatgtaccaagccatgtagttgatcacctatataag
ttattcaagcgtagacccagggttcaaaaaataaggacccagaccgacaacaactccaac
ccgttaaaagagcagtgtggtggttctctggctcccgatgtgctcggcaaaatgctgaag
gccatggaggagttggacgctccggagaatataccagaaggcctgaacccatcgatctgg
gagaggttttgtcttgtccgcagaacaaaagtagagagtgagcacgaggtaaaagtaaaa
gctttgactcttgctgagatgcaggcattcctgcagaagaggagagatgaggataaggct
gctcaacaagaaattaaaaatctttctgacgaacttgagagtctgcataaggagaagaac
cgttttctgacagacatcatggtccaggtcctactcaaacagggccaggtggaggtgtct
accacagacctgactgctgactacactgactctgtgcttcaccacagaagtgtggtggag
gacctcaacagtgccatcaggacacttggagagcagaagatagcctccatggtggagtgc
aaagacttccgtaagggcatcatccaactgcagtgggagcacaaaatgttggggatgcag
atagaggacctcaacaacagggcgagggacatccagatgttacgtctgtctgaggagcaa
caggattatctcaacaagacagatcgagacagtcgcgtatccaagcaagtttctattctg
gagaaaactatagctttccaggaaaagacccatctacagagcgtgcagcatcgcataaaa
aagattgaacagcttaacaggcaggcagcaatgaaagctgaaaagaacgcaatcgtagaa
cagcagctacctaatatgcaggtgactgtggcagagaggagacacgtctatgaagcaata
gcttcagaggaacatcaggcagctaaaacagaggagcgctaccaggaaatcgttcagaag
aagaacttggaggactttgccaaagcgcaggcggagaatctggccgtcctctgggcagaa
gtcgagcgcctgaggaggaagaactttccttcacttgatcagctgaaacacaactga
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integrated database retrieval system
