Siniperca chuatsi (mandarin fish): 122884403
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Entry
122884403 CDS
T08948
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03430
Mismatch repair
schu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122884403 (mlh1)
03460 Fanconi anemia pathway
122884403 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schu03400
]
122884403 (mlh1)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122884403 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DUF4100
Motif
Other DBs
NCBI-GeneID:
122884403
NCBI-ProteinID:
XP_044070251
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Position
LG11:8518491..8524710
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AA seq
730 aa
AA seq
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MAGVIRRLDETVVNRIAAGEVIQRPANGVKELIENCLDARSTNIQVTVKDGGLKLLQIQD
NGTGIRKEDMEIVCERFTTSKLQTFEDLSAIATYGFRGEALASISHVAHVTITTKTADAK
CAYKASYSDGKLKGPPKPCAGNQGTQILVEDLFYNVSTRRKALKSPSDEYSRIVDVVSRY
AIHNSGKSFSVKKQGETVADVRTLPNASVVDNIRGVFGNAVSRELIEVGCEDQKLAYKMK
GYISNANYSVKKCILILFINHRLVESSALKKAIETVYAAYLPKNTHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSVIESVQKHVESKLLGSNSSRTYFTQTLLPGLSVSGGGEVKST
SAAAESSERVYAHQMVRTDCRTQKLDAFLQPKEKSPPDPEPAGPSGSKAVTKTAQPDSVE
MDETDDADMMEALAEQEAEVPKGHEDNANGVQRKRPRKEQQQQEEEEDLRAAATPERRVI
KLNSIKELRGEITENTHKGLQEMLQNHSFVGCVNPQWTLIQHHTKLYLLNTTKLSQELFY
QILIYDFGNFGVLRLSTPAPLYDLAMLALDSEESGWTEEDGPKEGLAQYIVDFLKKKAEM
LEDYFSMEIDQEGNLTGLPLLLDKYTPVMEGLPMFILRLATEVNWDNEKECFRDFSKECS
VFYSIRKQYILEAESGEEQDAEVNSWRWKVEHIIFKAFRTLFSPPKNFSEDGTVLQIANL
PDLYKVFERC
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagttatccggaggctcgacgagactgttgtcaaccgcattgctgcaggagaa
gttatccagcgtcctgccaacggcgtcaaggaattgattgaaaactgtttggatgccagg
tccaccaacattcaggtgacagtgaaagacggcggactgaagctacttcagattcaggac
aacggcactggcatcaggaaagaagatatggaaattgtttgtgaaaggtttaccaccagc
aaactccagacttttgaggacctctccgctattgcaacctatggattcagaggagaggcc
cttgctagtataagccacgttgcccatgtgaccataacgactaagacagctgatgccaag
tgtgcctacaaagccagctacagcgatggcaaactaaaaggccctcccaaaccatgtgct
ggcaaccagggaacacagattcttgtggaggacctcttctataatgtgtccaccaggagg
aaagctttgaagagccccagtgatgagtactccaggattgtagatgtggtcagcaggtac
gccatacacaattcagggaaaagtttttctgtcaaaaagcaaggagagactgtggcagat
gtgaggactctacccaacgcatctgtagtggataatattcgaggagtttttggcaatgcg
gtcagcagggagctgattgaagttggctgtgaggatcagaagctcgcttataagatgaaa
ggctacatctctaacgcaaattactcagtcaagaaatgcatcctgatcctcttcatcaac
catcgtctggtggagtcaagtgctttgaagaaagcaatcgagacagtttacgccgcttac
cttcccaagaacacacacccgtttctatatctcagtttagagatcgctccgcagaatgta
gatgtgaatgtccatcccacaaaacacgaggtgcatttcttgcatgaagacagcgtcatc
gagagcgttcagaagcatgtcgagagcaaacttctgggctccaactcatcacgcacatat
ttcactcagacgttgctgccggggctgtcagtctcaggtggcggtgaggtcaagtccacc
agcgctgcagcagagtccagtgagcgggtctacgcacatcagatggtgaggaccgactgt
cgcacacagaagctggacgccttcctccaaccgaaagagaagtcgcctcccgatcctgaa
ccagccggtcccagcggcagtaaggctgtgaccaaaactgcccagcctgacagcgtagag
atggatgagacagatgatgcagacatgatggaggccctggctgagcaggaagcagaggtg
ccaaaaggccatgaagacaatgctaatggtgttcaaaggaagcgacccaggaaagagcag
cagcagcaggaagaagaagaggacttgagggctgcagccacgcccgagagacgagtcata
aaactgaacagcatcaaagagctcagaggggagatcactgagaacacacacaaaggtctt
caagaaatgctgcagaaccactcgtttgtgggctgcgtcaatcctcagtggactctgatc
caacatcacaccaaactgtacctgctcaacaccaccaaactcagtcaggagcttttctac
caaatactcatctacgactttgggaacttcggtgtactgagactatctacaccagctcca
ctttatgacctggccatgttggctctggactccgaggagagcggctggacagaagaggac
ggtcctaaagaaggcctggctcagtatatagtagacttcctgaagaagaaagctgagatg
ctggaggactacttctccatggagatagaccaggaaggaaatctaaccgggctgccatta
ctgcttgacaagtacacacctgtcatggagggtctccccatgttcatcctgcgcctggcc
actgaggtgaactgggacaatgaaaaagagtgcttcagagacttcagtaaggagtgcagt
gtgttctactccatcaggaagcagtacatcctggaggccgagtcgggagaggagcaggat
gctgaggtgaactcgtggcgttggaaagttgagcacatcattttcaaagctttccgaacc
ctcttcagtcctccgaagaactttagtgaggatggcaccgtgctgcagatcgccaactta
cctgatctctataaagtgtttgagaggtgctaa
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