Siniperca chuatsi (mandarin fish): 122884626
Help
Entry
122884626 CDS
T08948
Symbol
nid1a
Name
(RefSeq) nidogen-1
KO
K06826
nidogen (entactin)
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122884626 (nid1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122884626 (nid1a)
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
EGF-like domain-containing proteins
cEGF domain-containing proteins
122884626 (nid1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2F
NIDO
EGF_3
Ldl_recept_b
Thyroglobulin_1
cEGF
EGF_CA
FXa_inhibition
EGF
SGL
hEGF
EGF_MSP1_1
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
122884626
NCBI-ProteinID:
XP_044070690
LinkDB
All DBs
Position
LG11:9872201..9885580
Genome browser
AA seq
1202 aa
AA seq
DB search
MGWQGDGWLVCASFLGFVASVQSITRGELFPFGPSARDQLLEAGNDQTHRLELDKPVLFY
DGTFDHIFINTNGFVATTEPTSESTYLGKMPPRFGMIAALQGDLDTSDGVGKVFFRQDSS
SDILRRAAKHINRAFPEDDEVNPTHAVVITWVDVATHEPQSRGDGIDKKRNTFQLVFASL
ETASYAIVLYARDGVQFSSTPVEDSSVIMHAGFSKGLVQGFLFNSQGPYYRTTTDDEASV
RALAEETNSGLRGVWVYEIGTSPYFSNVAPGEVTDLPTEAAPQGPPEGYEETTDARRLVY
TNGQQVEYPPYEGEQIEIHPVQYQPHQPENPEVVVVDDTDINVDVFSYNLGTCANNRNKC
SQFADCKDYSSGYCCHCRPGFYGNGIQCVAEGKPQRINGKVHGKVYVGNSPSPEEFTSND
LHSYVVVNDGRSYVAISDIPFTLGPSLQPLSALGGVIGWAFALEQPGFKNGFSIIGGEFT
RQAEVTFLPGNEKLTIRQEFKGIDEHDHLVVSTTLEGQVPEVPRGSTIQINPYSEIYQYS
NNLITSSSTRDYVVSLPDGSTDTRTYQWRQTITFQSCQHGDSLRDMKSTQMLSVDQVFVL
YDATNKLIRFAMSNKIGDINGGQPEENPCFTGRHGCDTNAVCRPEQGTQFTCKCAAGFNG
DGRTCYDIDECRENPQICGSHAICNNQPGTFRCECIDGYQFASDGQSCIEVNRLVDPCEE
GTHNCDIPERAQCTYTAGWSYSCSCLPGFTGDGRICQDIDECQPGRCHQHAVCYNTQGSF
TCQCRPGYYGDGFYCSPERTKTPCETHRDSLLGWSPRGPRPPIGQYIPTCDENGAYEPMQ
CHGSTGHCWCVDQNGHEISGTRSGPGSRPMCIDHGVVPPPVGPTPRPGVHPLPPGTHLLF
AQSGRIEHIPLEGYSMKKDDAKAILHLPEKVIIGVAYDCVEKMVYWTEITSPSISKASIQ
GGEPIAVIRSDLDSPEGIAIDHLGRTMFWTDSVKDRIEVASLDGSQRRVIIDSGLVNPRA
IITDPPNGNLYWADWNRDAPKIETSYMDGSNRRVLVKDDLSLPNGLTYDSQSSLLCWADA
GTHKMECTHPGRGDRRQVMEGIQYPFGITSFGKNIYYTDWRRDAVVAVDRYTGRESDEFQ
PQKRTKLYGIATAYAQCPSGQNYCAVNNGGCTHLCLATPTGRSCKCPSNAVGVGCVERDS
GY
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgggttggcagggggacggatggctcgtctgtgcgagttttctcggatttgtggcgtcg
gtgcagagcataacgcggggagagctttttcctttcggtccaagcgcaagagaccagtta
ctggaagcagggaatgaccagacgcaccgacttgaactggacaagccagtgttgttttat
gatggcactttcgaccatatctttatcaacaccaatggttttgttgccacaacagagcca
acaagcgagtcgacatatcttggcaaaatgcccccaagattcggcatgattgcagctctg
caaggagacctggacacaagtgatggtgtggggaaagttttcttccgtcaagactccagt
tctgatattctgcgtcgggcagccaagcacatcaacagggccttccctgaggacgatgaa
gtcaatcccacccatgctgtggtgatcacctgggttgatgtcgccacccatgaacctcaa
agcagaggagatggcattgacaagaagagaaacaccttccagctggtttttgcatccctg
gagactgcctcctatgctattgtcctctacgcaagggatggggtacagttttcctccacg
cctgtagaagacagtagtgtgatcatgcatgctggcttcagtaagggtttggtccagggt
ttcctgtttaatagtcagggaccatactaccgcaccaccactgatgacgaggcatccgtc
agggctttagcagaggagaccaactctggcctgcggggagtatgggtgtatgagattgga
acgtctccctattttagcaacgtggctccaggtgaggtcactgacctgcccactgaggct
gcaccacaggggccccctgagggctacgaggagaccactgacgcaaggaggctcgtgtat
accaatggacagcaagtggagtaccctccttatgaaggggagcagattgaaatccaccca
gttcagtaccagccacatcagcctgagaacccagaagtggtggtggtggacgacacagat
ataaatgtagatgtgttctcatacaaccttgggacatgtgcgaacaatagaaataagtgc
tcgcaatttgctgactgcaaggactactccagtggatactgttgccactgcagacctggc
ttctatggcaatgggatacagtgtgtggcagagggaaagccacagaggataaatggtaaa
gtgcatggaaaagtatatgtgggcaactctccttctccagaggagttcaccagcaacgat
ctccactcatacgttgtggtaaacgatggccgttcctatgtggccatcagtgacatccct
ttcacccttgggccctcgctgcagcccctgtcggcccttgggggtgtgattgggtgggcg
tttgctctggagcagcctggcttcaagaatggcttcagtattattgggggggagttcaca
cggcaggctgaggtgacctttctgccagggaatgagaagctgaccatcaggcaggagttc
aaaggcatcgatgagcacgaccacctggtggtgagcaccaccctggaaggccaggtccct
gaggtgcctcgcggctccaccatccagatcaacccttactccgagatctaccagtacagc
aacaacttgatcacctcatcctccactcgggactatgtagtgagcttgcccgatggctcc
actgacaccaggacgtatcagtggcgtcagaccatcaccttccagagctgccagcatggc
gattctttgagagacatgaaatcgacccagatgctcagcgtggaccaggtctttgtcttg
tacgatgctactaataaactcatccggtttgccatgagcaacaagatcggggatatcaat
ggagggcagccagaggagaacccatgtttcactggaagacacggctgtgacaccaacgct
gtgtgccgacctgaacagggaactcagttcacctgcaagtgtgctgctggcttcaacggt
gatggccgcacatgttatgacattgatgagtgcagagagaatcctcagatatgtggctcc
catgctatctgcaacaatcagcctgggaccttccgctgtgaatgtatagatggatatcag
tttgccagtgatgggcagagctgcattgaggttaatcggcttgtggacccctgtgaagaa
ggcacccataactgtgacattcctgagcgcgctcagtgcacctacactgcaggctggtca
tacagctgctcctgcctgccagggttcacaggagatggtagaatctgtcaagacatagat
gagtgccagccaggcaggtgccatcagcacgctgtgtgttataacacccagggatcattt
acctgccagtgcaggccgggttactatggcgacggcttctactgctctccagagaggaca
aaaacaccatgtgagacccacagagacagtctcctgggttggtctccacggggtccccga
cctcccattggacagtacatccctacgtgtgacgagaacggtgcctatgaacccatgcag
tgccacggcagcacaggacactgctggtgcgtggaccaaaacggacatgagatctctggg
actcgctctgggcctggcagcagaccaatgtgtattgaccatggtgttgtgccaccgcct
gttggaccaacccctcgacccggtgtccaccccctgcctccaggaacacacctgttgttt
gcccagagtggcaggatagagcacatcccgctggaaggttacagtatgaaaaaggacgat
gccaaggctatcctccatctccctgagaaggtaatcatcggagtggcctatgactgtgtg
gagaaaatggtctactggactgaaatcacatctccctcaatcagcaaggccagcatccag
gggggagagcccattgcggtcattagatcagatttggatagcccagagggtatcgccatc
gaccacttgggacgaaccatgttctggacagactctgtgaaggatcgcatcgaggtggcc
tcattggacgggtctcagcgtcgtgtcattatagactctggtcttgtcaacccccgtgct
attatcactgatcctcccaatggtaatctatactgggccgactggaaccgcgatgccccc
aagattgagacctcttacatggatggatccaacagaagggtgctggttaaagacgatctc
agcctgcccaacggcttgacttacgactctcagagctctctgctttgttgggcagatgca
ggcacacataaaatggagtgcacgcatcctggccggggtgaccgcagacaggttatggag
gggattcagtacccttttggtatcacgtcttttgggaagaacatctactacactgactgg
cggagggatgccgtggttgctgtggaccgctatactggcagggagtcagacgagttccag
cctcagaaacggaccaagctatatgggatcgccacagcctatgcccagtgtccatcagga
caaaactactgcgctgtgaacaacgggggctgtactcacctctgtttagcaacccctacc
ggccgctcctgcaaatgtcccagcaacgcagtgggtgtgggctgtgtggagagagacagc
gggtactga
DBGET
integrated database retrieval system
