Siniperca chuatsi (mandarin fish): 122884632
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Entry
122884632 CDS
T08948
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122884632
Membrane trafficking [BR:
schu04131
]
Endocytosis
Others
Others
122884632
Endosome - Lysosome transport
122884632
Endosome - Golgi transport
122884632
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Pericardin_rpt
Motif
Other DBs
NCBI-GeneID:
122884632
NCBI-ProteinID:
XP_044070708
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Position
LG11:17887956..17933303
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AA seq
1250 aa
AA seq
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MGLWLFSSFSLLAFVLLYPFHPKFVAQAEISSPRTNDRSYRLEVTSLEARVTRKSTEVKV
SLKVDNSVKVLSTFETEAAGALKPNNGSQVGYETQSGLGNKAPIAIKTAPNYQNRVKIPG
KEYGNISEDNQRRPPANIMLENTFPDTRERAKRSVGTTYTENVDRSISGEAQSRQRFMET
VQGVSNSRAEYRRTGEEARGSNPRQSEPHLDTSTFALSGDSAHNQAMVHWSGHNSSVILI
LTKLYDFNLGAVTESSLWRSTDYGSTYTKLNDKVGSRTVLSYLYVCPTNKQKIMMLSDPE
VESAVLISSDEGASFEKHLINFNILSLLFHPAQENWMLAYSHDSKLYSSMDFGRKWQLVH
DNVMPGRFYWAVMGLDRESDVVHIETRIAKGRAQYVKCRAQRCTDGNRQYLFPGHVDTNS
LVVQDEYVFTQVTKSGRASYFVSYMRESFKRMKLPKYCLPKDMHIISTDEKQVFAAVQEW
NQNNTYSLYISDSPGVYFTLSLEDLRTSRGPAGNLLVDFYKVEGINGMYLANKLLDSHVK
TFITYNKGQTWALLPAPATDVAGNNLHCILPFCSLHLHLEMSENPYTSGPITSKKSVPGI
IVATGNIGTELSSTNLGMFITSDAGNSWRQIFDEEHNVWFLDNGGAMLAVLHAATPIRHL
WISLDEGKKWDRHSFSLAPLYVDGVLMEPESDNHIITFFGHFSHRSEWQLIKIDYKGLFS
RRCMDGDYQTWHLHNKGELCVMGEKQIYMKRRPGNRCMLAQDYSRIYSSEPCLCTAYDFE
CDYGWERQADGKCSPAFWFNPNGAAKSCSTSQSFLNSTGYRKVLSNNCKEGGKNVYSPKR
QACRPSPPRGLRLSISQGEFSATVGSNVTFMVYLDNGDSLRTSIQLDFGDGIKITYSNLS
RTDDGIKHIYRTTGIYRVTASAENSYGSDSSTLFLHITSPVERVYLSAPIVAIRGKEANL
TAVVWPSHTRTLTFFWWFDNSSEPIITLEGSISYTFQTEGKNKVTVQVASGSTIMQDSKV
ITVKEFFRSLLLSFSPALDEHNPDIPEWREDIGRVVRTALSQVSGVPDDQLLVSLYPGLP
TTAELFILPDEHTSSEHKRRSEEALETISDIFVTALNQGLIQFELKADIRIIVYMTQQTL
APLVDSNSIHSGSAMLMLLAVVFVGLAAFFIYKFKRKIPWIHVQTEDSHEKDSEVISTVG
QNDNMSKVKLSEFSSPKELMEKELEARNRGRIGRNMERIVTREFPNCTNV
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgggactgtggttattttcgagtttttctcttttggctttcgtattgttgtaccccttt
caccccaagtttgtggctcaagcggaaataagttctcccagaacaaacgacagatcttat
cgcctggaggtaacatcgctggaggcacgtgtaacccgaaaatcaacggaggtcaaagtc
tcactcaaagtcgacaatagcgtaaaagttttaagcacttttgaaacggaagcagccggt
gctttgaaaccgaacaatggtagccaagtggggtatgaaacacagagtggacttggaaat
aaggcaccgatcgccatcaaaacggcaccaaactatcaaaaccgtgtcaaaatacctggt
aaagagtatggtaacatttccgaggacaaccaaaggcgacctccagccaacataatgtta
gaaaacacatttcctgacacaagagagagggcaaaaaggagcgtgggtacaacatacacc
gaaaatgtggataggagcattagtggagaagctcagtcaagacagaggtttatggagact
gtgcaaggtgtttccaactccagagccgagtaccggcgcactggggaggaagccagaggg
tctaacccgaggcaaagcgagccgcacctggacacttctacttttgctctgtcgggagac
tcggcacacaaccaggcgatggttcactggtccggacacaacagcagcgtgatcctgatc
ttgactaagctgtatgacttcaacctgggggccgttactgagagctcactctggagatcc
actgattatggaagcacctacaccaaactcaatgacaaagtgggttcaaggacagtttta
agttacctgtacgtctgccctaccaacaaacagaagataatgatgcttagcgacccagag
gtagagagcgctgttctcatcagttcagatgaaggggcaagctttgagaagcatctcatt
aacttcaatatcctgagcctgctcttccaccctgcacaggagaactggatgctggcttac
agtcatgacagcaagctgtacagttcaatggactttgggaggaaatggcagcttgttcac
gacaacgtgatgccaggccgattctactgggcggtaatggggctggacagagaatcagat
gtggtccacatcgagacgcgcattgcaaaaggccgcgcccaatacgtgaagtgcagagcc
cagcgatgcacagatggcaacaggcagtacctctttcctggacatgtagacaccaactca
ctggttgtgcaggatgaatatgttttcacacaggtaaccaagtcaggacgagccagctac
tttgtctcctacatgagagaatccttcaagcggatgaaattacctaaatattgtctacca
aaggatatgcacattatcagtacagatgagaagcaggtatttgctgcagtccaggagtgg
aatcagaacaacacttacagcctgtatatctcagactcccctggtgtctactttaccctt
tcattagaggatctgagaaccagcagaggacctgccggtaacctactggttgacttttat
aaggttgaggggataaatggcatgtatctcgccaacaaacttctggacagtcatgtcaag
acttttatcacatacaacaagggacaaacatgggccctgctgccagctcctgccactgat
gtggcaggaaataaccttcactgcatcctgccattttgttcgctgcatcttcatctggag
atgtcggagaatccctacacgtccggacccatcaccagcaaaaagtctgtaccaggaatc
attgtggctacagggaatatcggaacagagctgtcctccaccaaccttgggatgtttata
acatctgatgcaggaaatagctggagacagattttcgatgaagagcacaacgtttggttt
cttgacaatggaggggccatgctggcagtcttacatgcagcgacacctattcgacactta
tggatcagtctagacgaaggaaagaaatgggaccgtcacagtttctccttggcacctcta
tatgtggatggagttttaatggagccagaatctgacaatcacattatcactttctttgga
cacttcagccatcgatcagagtggcagctgatcaagatcgactacaagggcctctttagc
aggagatgcatggatggagattatcagacatggcaccttcacaacaagggagagctgtgt
gtgatgggcgagaagcagatctatatgaagcgcaggccaggcaaccgttgcatgctggcc
caggattattcaaggatctattcctcagagccatgcctttgcacagcttatgattttgaa
tgtgattatgggtgggaacgccaggcggatgggaaatgctcccctgctttttggtttaat
ccaaatggtgcggctaaaagctgcagcaccagccaaagcttccttaacagcacagggtat
cggaaggttttgtccaataactgtaaggagggagggaagaatgtgtactcgcccaagagg
caggcatgccgtcccagcccaccccgaggcctccggctatccatcagtcaaggagagttc
agtgccactgttggaagcaacgttactttcatggtttacctggacaatggagactcgctg
aggaccagcatccagctagactttggggacggcatcaagatcacatactctaacctgagc
aggactgatgatggcatcaagcacatctacagaacgactgggatttacagagtgacagct
tctgctgaaaacagctacggatctgacagcagtacactgtttttacacatcaccagtcca
gtggagcgtgtatatctctccgctcctattgtagccatcagagggaaggaggctaatctg
actgcggtggtttggccgagtcacaccagaacattgaccttcttctggtggtttgacaac
agctcggagcccattataaccttggagggaagcatatcatacacgtttcagacagagggg
aaaaacaaggttacggtccaggttgcttctgggagcaccataatgcaggattcaaaagtt
ataactgttaaagagttcttcaggtcgctgcttttgtcgttctcgccagctcttgatgag
cacaaccctgacatccccgagtggagggaggacatagggcgtgtggtgcggacagctctg
tcacaggtgtctggggttcctgatgatcagctgctggtgtctttgtaccctggacttcca
actacagcagagctctttatcctacctgatgagcatacatcaagtgagcacaagagaagg
agtgaggaggctctggagacgatatcagatatttttgtcactgccctgaaccaaggcctg
atccagtttgagctgaaagctgatattcgcattattgtatacatgactcagcaaactttg
gcgccgcttgtggattcaaactccatccacagtgggtcggccatgctgatgctgctcgct
gtggtatttgttggtttagcggcattcttcatctacaagttcaaaaggaaaatcccttgg
atccatgttcagactgaggacagtcatgagaaggactcggaagtgatcagtacagtcggt
cagaacgacaacatgtccaaggtcaagctcagtgagttttcctctccaaaagaactcatg
gaaaaggagctagaggccaggaacagaggaagaattggaagaaatatggagagaattgtt
acaagggaatttccaaactgtacaaatgtctaa
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