Siniperca chuatsi (mandarin fish): 122884655
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Entry
122884655 CDS
T08948
Symbol
npas4l
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122884655 (npas4l)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122884655 (npas4l)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
PAS_9
PAS_2
HLH
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
122884655
NCBI-ProteinID:
XP_044070779
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Position
LG11:complement(9530632..9536427)
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AA seq
769 aa
AA seq
DB search
MTIWCNSCRCHVSAPCTHHLLPEDHRSSYCRRFRSTKGASKARRDHINHEIRNMRTLLPI
TQEDQERLSYLHSMAAICTYIRKSVLLQGLPAGERSHCSLPYEAFLQALHGFILVTTAQG
RLVYVSENVAEYLGLSMVDVLQGDSFYDMVERSDVDIVKSNLDIENNSSSERSFICCMQT
SKAFKLQHGSCCSMMVRGGFRSFPQPCPSSSSVCPTNQPLFVALCTPTVNRLRSSDSHFC
HSFTSVHRLDMTFTQLSDSVLYYLGYSAEEMTGRSWYSLVHPEDLSLSADSHKSLMQADE
GFQVEMVLRLQCKDLSWTWSYIQANKDSECQGMSCTNFLISETEARFLQTKISSDAFRPS
SLANSCHFVAQQASHTQSYNSTKCFKRQRTSNSQSEEPGAKARRDSEQDTYYAACASYQG
DSSPAPLSDSPALFTPPYSPASSSSPLRQEELNHDLLTDVHGYTDQLLSSPEGSPSYYSY
PEAGLTCHQSPSDSLPAAIEQTFDQAAFGALSARSPLSSSSSTYDFQACTSDARLVPDCP
SVSDICESPVDCALHQDDFSLLEQPEGGSLVQVHHVPHRVFPIHSSLLTPNQSPTSTGSN
HYNEREQAEISILAQQISSLASSFAMYHTLNPLQNNTLPSACDWPHHPPLPSVLPPKREL
VLDEGVFDSILKDLDMVARKSSTSGPAVVSDSYQQGLLRSRSGPHQLEQEPFGLSPTIPE
DPLPAEQFTAMDLFSLQLGHHDQNTGLHQLNHYMQSSLQQDGLAEENLY
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgactatttggtgcaactcctgcagatgtcatgtaagtgctccgtgcacccatcatctg
ctgcctgaggatcaccgcagctcctactgcagaaggttcagatccaccaaaggagcatcc
aaagcccggcgggaccacatcaatcatgagatcaggaatatgcgcactctgttgcccatt
acccaggaggaccaggagcgtctctcctacctgcactccatggccgccatctgcacctac
atcaggaagtctgttctcctccagggactcccggccggggagagatcacactgctccctg
ccatacgaggcctttcttcaagccctgcacggcttcatcctggtcactaccgcccagggg
aggctggtgtatgtgtccgaaaatgtagctgaatatcttggtctctccatggtagatgtg
cttcaaggagactcattctatgacatggtggaacgctctgacgttgatattgtcaaatca
aacctggacattgaaaacaactcatcatcagagaggagctttatatgttgtatgcaaacc
tccaaggccttcaagctgcaacacggcagctgctgctccatgatggtcagggggggcttc
cggtctttccctcagccttgtccgtcctcctcttcagtctgtcccaccaaccagcctctg
ttcgtggccctctgcacccccacagtcaaccgcctgcggagctctgactcccacttctgt
cacagcttcaccagtgtccacagactcgatatgacctttactcagctgtcagacagtgtc
ttatattatttggggtattcagctgaagaaatgactggtcgatcgtggtacagtcttgtc
caccctgaagatctatctttgagtgcagattctcataaaagtttaatgcaggcagatgag
ggcttccaggtagagatggtgctcagactccagtgcaaggatctgtcatggacctggagc
tacattcaagctaacaaggactctgagtgccagggcatgagctgcacaaacttcctcatc
agtgagacagaggccagatttctgcagacgaaaatcagcagcgacgccttcagaccatca
tctctggcaaattcctgccattttgtagctcaacaggcatcccacactcagagctacaac
agcactaaatgctttaaaaggcagaggacgtctaacagccaaagcgaggagccgggtgcc
aaagctaggagggactccgagcaagatacgtactatgcggcgtgcgcctcctaccaaggc
gacagctcacctgctcccttgagcgatagccctgctctcttcacccctccctacagcccg
gcctcctccagctcccctctgcggcaggaggagctcaaccatgacctcctgacggatgtg
catggatacacagatcagctgctgtcgtcccctgagggctctccctcctattactcctac
ccagaggcagggctcacctgtcaccaatcaccctccgactccctccctgcagccatcgaa
caaacctttgaccaggcagccttcggcgcgctaagtgctcgctctccactctcctcctca
tcttcgacctatgatttccaagcttgtacatccgatgctcgattagttccggactgcccg
tctgtgtccgacatctgtgagagcccagtggactgtgctctgcatcaagacgacttcagc
cttctcgagcagccagaagggggcagccttgtccaagtgcatcatgttccccaccgtgtg
tttcccatacattccagtcttcttaccccaaaccaatctcccacatccacagggtctaac
cattacaacgagagggagcaggcagagatcagcattctggctcagcagatctcctccctg
gccagcagctttgccatgtatcacaccctgaacccgcttcaaaataacaccctgccctca
gcctgtgactggccccaccaccctcctctcccctcagtccttcctcctaagcgtgagctg
gtcctcgatgaaggcgtgttcgacagcatcctgaaagacctggacatggtcgcaaggaaa
agcagcacgtccggccctgctgttgtgtcagacagctaccagcagggcttgttgcgcagc
aggagtgggccccatcagttggagcaggagccctttggtctctccccgaccatcccagag
gacccgctgcctgcagagcagttcactgccatggatctgttcagtttgcagttgggacac
catgaccaaaacactgggttgcatcaactcaaccactatatgcaaagtagccttcagcaa
gatggacttgctgaagaaaacctgtactga
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