Siniperca chuatsi (mandarin fish): 122884699
Help
Entry
122884699 CDS
T08948
Symbol
ddx43
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122884699 (ddx43)
Enzymes [BR:
schu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122884699 (ddx43)
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
122884699 (ddx43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
MOEP19
KH_2
ResIII
KH_PNO1_2nd
KH-I_KHDC4-BBP
SNF2-rel_dom
CMS1
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
122884699
NCBI-ProteinID:
XP_044070887
LinkDB
All DBs
Position
LG11:complement(22887533..22901551)
Genome browser
AA seq
703 aa
AA seq
DB search
MSDWEEYNEGCVAIQKPATKSPPTEWKLPCNDRQRENVFFGVRNGARFGGSREWRADRSG
ERSEYKSRRGEGRPLPRSTRQRSFGDEKSDSSPPVIVTVENASVGRVIGRGGAKIRELEE
STGARIKINKGDYEGEVVIFGSSAAQQKAKKMIEDLVADGSSRFRNGLGRWSSYGGGYRG
GVDGEVRNDSAWSAAELEAAKAAPARVSIDWNTIRENKDKYEALKWKDLPPMKKKFYTEA
ECVSMLTVEEVSEWRKENNNIFVDDLKEEGEKRPIPNPCRTFLEAFELYPEIMENIEQVG
FVTPTPIQSQAWPVLLSGEDLIAIAQTGTGKTLAYLLPGFIHMDGQPVPRDERGGPGMLV
LTPTRELALQIETECKKYSYKSYKSLCIYGGGDRRGQINLVKGGVDIVIATPGRLNDLQM
NELINLRSITYLVLDEADRMLDMGFEPQIMKILLDIRPDRQTVMTSATWPTGVRRLSKSY
LKNPMMVYVGTLDLAAVNTVQQTVLIVHEEEKKSYVFDFIRDMLPQDKVLIFVGKKLLAD
DLSSDLCLQGLAVQSLHGDREQCDREEALKDFKESRVRILVATDLASRGLDVHDITHVFN
YDFPRNIEEYVHRVGRTGRAGRSGAAVTLVTRENWRMAAELIPILERAGQEVPEELVLMA
DRYEKHKREKEMCHPGGTRGGGGWGRRDGGGKGGRDRSQNWGF
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactgggaagagtacaacgagggctgcgttgctatccagaagcctgctacgaaa
tcacctccgactgaatggaaattgccatgtaatgaccgtcaaagggaaaatgtatttttc
ggtgtaagaaatggagccaggtttggaggctcaagagagtggagagctgatcgtagcggc
gagagatccgagtacaaaagtcgcagaggcgaaggccgtccgcttccccggagcactaga
cagcgaagctttggcgatgaaaagtcggactcttccccgcctgtaattgtcaccgtggaa
aatgcttcagtggggagggtaataggtcgcgggggagccaaaatccgtgaacttgaagaa
agcaccggtgccagaatcaagataaacaagggagactatgaaggtgaggtggttatcttt
ggttcctctgctgcccagcagaaggccaagaagatgattgaagacctggtggcagatggc
agctctcgatttcgcaatggtcttggtaggtggagcagctatggaggaggctacagaggg
ggagttgatggagaagtaaggaatgattctgcctggtctgctgcagaattagaggctgca
aaagccgccccggcccgtgtatctatagactggaacaccatccgggagaacaaggataag
tacgaggcgctcaagtggaaggacctcccacccatgaagaagaagttttatactgaggca
gagtgtgtatccatgctcacagtagaagaagtcagtgaatggaggaaggagaataacaat
atctttgtggacgacctgaaggaggagggggagaagcggccaattcccaatccctgtcgc
acctttctggaggcctttgagctttatccagagatcatggaaaatattgagcaagttggt
tttgtcacaccaacccccatccagtctcaggcgtggccagtgttgctgagcggggaggac
ctgattgccatcgctcagacaggaacagggaaaaccctggcctacctgctgccggggttc
atccacatggacggacagcctgtacctagagatgaacggggtggtccaggcatgttggtg
ctgactcccaccagagagctggccctgcagattgaaactgagtgcaaaaagtacagctat
aagagctacaaaagtctctgtatctatggtggaggtgataggagaggccagatcaacctg
gtgaagggcggagtggacatagtgatcgctacaccaggccggttaaatgatctgcagatg
aatgagctcatcaatctacgttccatcacgtacttggtgctggatgaggctgaccgtatg
ctagatatgggctttgaaccccagattatgaagattctcctggacatccgcccagaccga
cagactgtcatgaccagtgccacctggcccaccggtgtgagacgattgtccaaatcctac
ctaaagaatcccatgatggtttatgtgggcaccctggacttggcggcagttaacacagtg
cagcaaacagtgctgatcgtccatgaagaggagaaaaagtcatatgtgtttgacttcatc
agagacatgctcccccaggataaagtcctaatctttgttggcaagaagcttctggctgat
gacctgtctagtgacctgtgtctgcagggtctggctgtgcaaagtctccatggtgaccgt
gagcagtgtgaccgtgaagaagccctcaaggactttaaagagagtagagttcgtatcctg
gttgccacagacttggcatctcgagggttggatgtccatgacataacgcatgtctttaac
tatgacttcccacgtaatatagaagagtatgtccatcgtgtgggccgtactggccgagca
gggcgttcaggtgctgctgttaccctggtaacaagagagaactggaggatggccgctgag
ctgattcccatcctggagcgagcaggacaggaggtccctgaggagctggtgcttatggca
gacagatacgagaagcacaagagggagaaggagatgtgccatccagggggaacacgagga
ggaggaggatgggggaggagagatgggggagggaaaggaggcagggatcgaagccaaaac
tggggattctaa
DBGET
integrated database retrieval system
