Siniperca chuatsi (mandarin fish): 122884771
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Entry
122884771 CDS
T08948
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04517
IgSF CAM signaling
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122884771
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122884771
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122884771
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122884771
Intermediate filaments
Intermediate filament-binding proteins
122884771
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
Motif
Other DBs
NCBI-GeneID:
122884771
NCBI-ProteinID:
XP_044071030
LinkDB
All DBs
Position
LG11:28129554..28261585
Genome browser
AA seq
2380 aa
AA seq
DB search
MELQSATSSLPGPLSPGPLSPTLDYAGPLSPSSGGPGPSHASPSRGLSPSLSPLRGPSPG
PGFTGQAAFNYNQLEGRFKQLQDEREAVQKKTFTKWVNSHLSRVSCRITDLYMDLRDGRM
LIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTL
GLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFSTSWRDGMA
FNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDAEDISVDHPDEKSII
TYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNN
RKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYTPREGK
LISDINKAWERLEKAEHERELALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQ
DNFGFDLQAVEAATKKHEAIETDIAAYEERVQAVVAVAKELEAESYHDIKRITARKDNVI
RLWEYLLELLKARRLRLEQTLGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLL
QKHALVEADIGIQADRVRNVNSNAQKFADDMEGYKPCDPQIIRDRVAHMDFCYQELSQLA
AERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSEDYGKDLTGALRLLSQHKAFEDEM
SGRAALLQQTIKQGEELVANNHFGADKIKERIEDIQEQWAALERLSAVRKARLQEACNQH
QFQADADDIDTWMLDVLRIVSSVDVGHDEFSTQALVKKHKDVAEEIGSYRPVIDALHEQS
RTLPPEKANSEEVQSRLAGIEERYKEVVELTRLRKQALQDALALYKMLSEASACEVWIDE
KEQWLNSMEIPEKLEDLEVVQHRFENLEPEMNNQASRVAVVNQVARQLIHSGHPSEKEIK
AKQDKLNTRWSQFRDLVDQKKDSLSSALGVQNYHLECNETKSWIKEKTKVIESTQELGND
LAGVMALQRKLTGMERDLAAIEDKLGDLGKEADRLASEHPEQSEAIKGRLAEITGVWDEM
KDTMKNREESLGEASKLQQFLRELDDFQSWLSRTQTAIASEDMPNTLAEAEKLLAQHEGI
KNEIRNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQ
SHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTLDANEEKISG
VVDTGRRLVTDGNINAERIQEKVDSIDQRHKKNRAAASDLLTRLKDNRDLQKFLQDCQEL
SLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELQSNKEWLDKIDKDGQALMAEKPET
EAMVKEKLASLKTMWEDLESTTQTKAKCLFDANKAELFTQSCADLDKWLASLEAQLQSDD
YGKDLTSVNIMLKKQQILESQVEVRQKEVGELQSQSQALSQEGKGSEEVDGQRISVERKF
QFLQAPLKKRRDNLMASREIHQFNRDMEDEILWVEERMPLATSTDHGHNLQTVQLLIKKN
QTLQKEIQGHQPRYDDIFERSQHVLREDSPTAELIRQRLAELQSLWEQIRKETEKRHDRL
SEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYADTV
HQLSSTSRGLVAAEHPDSERIGMRQSQVDKLYAGLKDLSEERRGKLDERFRLFQLNREVD
DLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDGVNRQADELINT
GHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILNRILDKHKKL
PEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQKREGE
KRKGEVLEAWKNLLEAAEGRRVKLVDTGDKFRFFSMVRDLMLWMEDVIRLIEAQENPRDV
SSVELLMNNHQGIKAEIDARNDSFTACIELGKALLARKHYASEEIKEKLLQLTDKRKDMI
DKWEDRWEWLRLVLEVHQFSRDAGVAEAWLLGQEPYLSSREIGQNVDEVEKLIKRHEAFE
KSAATWEERFSALERLTTMELLEVRRAQEEEEKRRQPPPTEAQPGDAAAQHREGEPVSQN
GLPSDQESPRDNADGGEVVNGVSDPTPAGSPGASRKGTASQAATLPAKTQQDAPTSQLEG
FLHRKHEWEGHNKKASSRSWHNVYCVINQQEMGFYKDQKSASQGIPYHSEIPVSLKDAVC
EVALDYKKKKHVFKLKITDGNEYLFQAKDDEEMNLWISAISAAVSGDKSEVTPSSHSTPA
PAARAQTLPASVAAVAAAESSPGKREKDKEKRFSLFSKKK
NT seq
7143 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcagagcgccaccagcagtctccccggccctctttcccctggccctctctct
cccaccttggactatgctggccccctgtccccatcgtcaggtggccccggcccatctcat
gccagccccagccggggtctaagccccagccttagccccctcagggggcccagccccggc
cctggattcacgggccaggctgccttcaactacaaccagctggagggcaggtttaaacag
cttcaagatgagcgtgaggcggtgcagaagaagaccttcaccaagtgggtgaactcgcac
ctgtccagagtttcctgtcggatcaccgacctctacatggacctgagggacggacgcatg
ctcatcaaactgctggaggtcctgtcaggagagagactgcccaaacccaccaagggtcgg
atgcggatccactgtctggagaacgttgacaaggctctgcagttcctgaaggagcagagg
gttcacctggagaacatgggctcccacgacatcgtagacggaaaccaccgcctcaccctg
gggctcatctggaccatcatcctccgcttccagatccaggacatcagtgtggagacggag
gacaacaaggagaagaagtcggctaaagatgctctgctgctctggtgtcagatgaagacg
gcaggatatccaaacgtcaacatccacaacttcagcaccagctggagagacgggatggcc
ttcaacgcgctcatccacaaacacagaccggacctgatcgactttgataagctgaagaaa
tcaaacgctcactacaacctgcagaatgccttcaacctggccgagcaacacctgggtctc
accaagctgctggacgccgaggacatcagtgtggaccaccctgatgagaagtccatcatc
acctacgtggtgacctactaccactacttctccaagatgaaggcgctgaaggtggagggg
aagagaatcggcaaggtcctggacaacgccatcgagacggagaagatgattgagaagtac
gagtctctggcgtccgacctgctggagtggatcgaacagaccatcatcatcctcaacaac
aggaagtttgcaaactctctggtgggagtccagcagcagcttcaggccttcaacacttac
cgcactgtggagaaaccaccaaagttcacagagaaggggaacctggaggttcttctgttc
accatccagagtaagatgagagccaacaaccagaaagtctacactccccgagagggcaaa
ctcatctctgacatcaacaaggcatgggagcgtctggagaaggcggagcacgagcgggag
ctggctctgaggacggagctgattcgtcaggagaaactggagcagctcgcccgccgcttc
gaccgcaaagccgccatgagggagacgtggctgagtgagaaccagaggctggtctcccag
gataactttggatttgacctccaggctgtagaagctgctactaagaaacatgaagccata
gaaacggacatcgcagcctacgaggagcgagttcaggcggtggttgccgtggcgaaggag
ctggaggcggagagttaccatgacatcaaacgcatcacggccaggaaggacaacgtgatc
cggctgtgggagtacctgctggagctgctgaaggcccgcaggctgagactggagcagact
ctgggcctgcagagagtcttccaggagatgctctacatcatggactggatggacgagatg
aagatgctgctgctctctcaggattatgggaaacacctgctgggtgtggaggacctgctg
cagaaacacgctctggtggaggccgacatcggcatccaggccgaccgagtccgaaacgtc
aacagcaacgctcagaagttcgccgacgacatggagggttataagccctgtgatcctcag
atcatcagggatcgggtcgctcacatggacttctgctaccaggagctgagccagctggca
gctgagcggcgagctcgcctcgaggagtcccgccgcctctggaagttcttctgggaaatg
gcagaagaggagggctggatcagagagaaggagcagatcctgtcctccgaggattatggg
aaggatctgacgggagcgttgcgactgctgagtcagcacaaagccttcgaagacgagatg
agcgggcgagccgccctcctgcagcagaccatcaaacagggcgaggagctggtggccaac
aaccactttggagccgacaagattaaagaacgcatcgaggacatccaggagcagtgggcg
gctctggagcgcctttctgccgtccgtaaagctcgtctgcaggaggcctgcaaccagcac
cagttccaggccgacgccgacgacatcgacacgtggatgctggatgtgctgcgcatcgtc
tccagcgtggacgtcggccacgacgagttctccactcaggctctggtgaagaaacacaag
gacgtggccgaggagatcggcagctaccggcccgtcatcgacgctctgcacgaacagtct
cgcacgctgcctcccgagaaggccaactctgaggaggttcagagcaggctggcgggcatc
gaggagcgttataaggaggtggtggagctgacgcggctcaggaagcaggcgctgcaggac
gctctggctctctacaagatgctgagcgaagccagcgcctgcgaggtctggatcgacgag
aaggagcagtggctcaacagcatggagatccccgagaaactggaggacctggaggtcgtc
cagcaccggttcgagaatttggagccggagatgaacaaccaggcgtcccgcgttgccgtg
gtgaaccaggttgccaggcaactgatccacagcggacatcccagtgagaaggagatcaaa
gccaagcaggacaaactcaacaccaggtggagtcagttcagagatctggtggaccagaag
aaagacagtctgagctcggctctgggcgtccagaactaccacctggagtgtaacgagacc
aagtcctggatcaaagagaagactaaggtgattgagtccacccaggagctggggaacgac
ctggccggcgtcatggctctgcagaggaagctgacggggatggagcgcgacctggccgcc
atcgaagacaagctgggcgacctgggaaaagaggcggaccgtttggcctcagaacacccg
gagcagtctgaggccatcaagggtcgactggctgagatcaccggcgtctgggacgagatg
aaggacaccatgaagaaccgggaggagtccctgggcgaggccagcaagctgcagcagttc
ctgcgcgaactggacgacttccagtcgtggctgtcgcggacgcagacggccatcgcctct
gaggacatgcccaacacgctggctgaggccgagaagctgctggcccagcacgagggcatc
aagaacgagatccgcaactacgaggaggactaccagaagatgcgggacatgggcgaaatg
gtgacgcagggccagacggacgcgcagtacatgttcctgcgacagaggctgcaggcgctc
gacaccggctggaacgagctgcacaagatgtgggagaaccggcagaacctgctgtcccag
tcccacgcttaccagctgttcctcagggacaccaagcaggccgaggccttcctcaacaac
caggagtacgtcctggctcacaccgagatgcccaccactctggagggggccgaggccgcc
atcaagaagcaggaggacttcatgaccaccttggacgccaacgaggagaagatcagcggc
gtggtcgacaccggccggcgcctggtaaccgacggcaacatcaacgcagagcgcatccag
gagaaggtggactcaatcgaccagagacacaagaagaaccgagcagctgccagcgacctg
ctgacgaggctgaaggacaacagagacctgcagaagttcctgcaggactgccaggagctg
tccctgtggatcaatgagaagatgctgacggctcaggacatgtcgtacgacgaggccagg
aacctccacagcaagtggctcaaacaccaggccttcatggccgagctgcagtccaacaag
gagtggctggacaagatcgacaaggacgggcaggcgctgatggcagagaaaccggagacg
gaggccatggtgaaagagaagctggcgtccctgaagacgatgtgggaggacctcgagtcg
accacccagaccaaggccaagtgtctgtttgacgccaacaaggccgagctgttcacccag
agctgcgccgacctcgacaagtggctggccagcctggaggcacagctgcagtccgacgac
tacggcaaagacctcacctccgtcaacatcatgctcaagaaacagcagatcttggagagc
caggtggaggtgcgtcagaaggaggtgggcgagctgcagagccagtcgcaggccctcagt
caggaggggaaaggctctgaggaggtggacggacagaggatcagcgtggagaggaagttc
cagttcctccaggcaccactgaagaagagacgagacaacctcatggcctcccgagagatc
caccagttcaacagggacatggaggacgagatcctctgggttgaggagaggatgcctctg
gccacatcgaccgaccacggacacaacctgcagactgtacagctgctcatcaagaagaac
cagacgctgcagaaggagatccagggccatcagccgcgctacgacgacatcttcgagcgc
agccagcacgtcctgagggaggacagcccgacggcagagctgattcgccagcggctcgcc
gagctccagtcgctgtgggaacagatcaggaaggagacagaaaagcgccacgaccgcctc
agcgaggcccacaaggcccagcagtactacttcgacgccgcggaggccgaggcctggatg
agcgaacaggagctctacatgatgtcagaggagaaggcgaaggacgagcagagttcggtg
gccatgctgaagaagcatcagatcctggagcaggcggtggaggattacgccgacaccgtc
caccagctgtccagcaccagtcggggcctggtggccgccgaacaccccgacagtgagcgc
atcgggatgcgtcagtctcaggtggataagctgtacgcggggctgaaggatttgtcggag
gagcgtcgggggaagctggacgagcgtttccgtctcttccagctcaacagagaggtggac
gacctggagcagtggatcgctgagagggaggtggtggccggatcccacgagctgggacag
gactacgaacacgtcaccatgctgcaggagcgtttcagagaattcgcccgcgacactggg
aacatcggccaggagcgcgtggacggcgtcaaccggcaggcggacgagctgatcaacacc
ggccacagcgacgctgccaccatcgcagagtggaaggacggcctgaacgaggcctgggcc
gacctgctggagctcatcgacacccgaacgcagatcctcgccgcctcctacgaactccac
aagttctaccacgacgccaaggagatcctcaaccgcatcctggacaaacacaagaagctt
cccgaggagctgggccgggaccagaacacggtggaaaccctgcagaggatgcacaccacc
ttcgaacacgacattcaggcgctgggaacgcaggtgcggcagcttcaggaggacgcagtc
cgtctgcagtctgcgtacgctggagataaagctgacgacattcagaagagagaaggagag
aagagaaagggagaggtccttgaggcctggaagaacctgctggaggctgcggagggccgc
cgggtgaagctggtcgacaccggagacaagttccgcttcttcagcatggtgcgggacctg
atgctgtggatggaggacgtcatccgcctgatcgaggcccaggagaatcccagggatgtg
tcgtcggtggagctgctgatgaacaaccaccagggcatcaaggcggagatcgacgcccgc
aacgacagcttcacagcctgcatcgagctgggcaaagccctgctggccaggaagcactac
gcttcagaggagattaaagaaaagttgttacagttgacggataagaggaaagacatgatt
gacaagtgggaggacagatgggagtggcttagactggtcctggaggtgcaccagttctcc
cgggacgcaggtgtggccgaggcctggctgctgggtcaggagccctacctgtccagcagg
gagatcggccagaacgtggacgaggtggagaaactcatcaaacgccacgaggcctttgag
aagtcggccgccacctgggaggaacgcttctccgctctggagaggttgaccacgatggag
ttactggaagtgagaagagcgcaagaggaagaagagaagaggagacaacccccgcccact
gaggctcagcccggcgacgctgcagcgcagcacagggagggtgagccggtgtctcagaac
gggctgccgtccgatcaggagtctcccagggataacgccgacgggggcgaggtggtcaac
ggggtgtcggaccccacccccgcggggtctcccggggcgtctcgcaagggcacggccagc
caggcagcgaccctgccggccaagacccagcaggacgctcccacgtcccagctggagggc
ttcctgcaccgcaaacacgagtgggaggggcataacaagaaggcttctagcaggtcgtgg
cacaatgtgtactgtgtgatcaatcagcaggagatgggtttctataaggatcagaagagc
gccagtcagggtattccctaccacagcgagattcccgtcagcctaaaggatgctgtctgc
gaggtggcgctggactacaagaagaagaaacacgtcttcaagctcaagattactgacggg
aatgagtatctcttccaagccaaagatgacgaggagatgaacctgtggatctcggccatc
tcggccgccgtgtcaggcgacaagtcggaggtcacgcccagcagccatagcacgcccgcc
ccagccgcacgcgctcagacgctgccggcctccgtggcggcggtggcggcggccgagtcc
agcccgggcaaacgagagaaagacaaggagaaacgcttcagtctgttcagcaagaagaaa
tag
DBGET
integrated database retrieval system
