Siniperca chuatsi (mandarin fish): 122884777
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Entry
122884777 CDS
T08948
Name
(RefSeq) LOW QUALITY PROTEIN: B-cadherin-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04371
Apelin signaling pathway
schu04514
Cell adhesion molecules
schu04520
Adherens junction
schu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
122884777
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122884777
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
122884777
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122884777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122884777
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122884777
04090 CD molecules [BR:
schu04090
]
122884777
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
122884777
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Major cadherins
122884777
CD molecules [BR:
schu04090
]
Proteins
122884777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
TM_ErbB1
PKD_4
Big_13
Motif
Other DBs
NCBI-GeneID:
122884777
NCBI-ProteinID:
XP_044071046
LinkDB
All DBs
Position
LG11:1574980..1605286
Genome browser
AA seq
1145 aa
AA seq
DB search
MGTARFAVLAILIAVFQASDLVTAEDPTCVPGFESDVLIFKVPRKRLMQGTRLGKVGFTD
CTDRTRFLFRSDDRRFVVQTDGILTVNRQVVLHEGHQDFFIHSWDKQGRKMTVPVRVLHH
ERHHGNHHQNVEQHHNHHPHLTEWDSNIAESTADPQVPVLHFPKSAEGLRRKKREWVIPD
ISFPENHRGPFPFKVSQIRSNEDKVKKIYYSISGPGADQPPVGLFTMDRDTGNLYVTQPL
DRETETKYTFQVHAVADGSGNAEQPMDITVIVIDQNDNKPVFTQATYLGEVAEASPIGFE
VIKVVATDLDDPSTANADIHYSIISQEPKFPTDLFAINPETGAIRIDVRGLDREAHPNHT
LVVRAADMEGKGLAGEATVILTVTDSNDNAPAFAQPSSTADPQVPVLHFPKSAEGLRRKK
REWVIPDISFPENHRGPFPFKVSQIRSNEDKVKKIYYSISGPGADQPPVGLFTMDRDTGN
LYVTQPLDRETETKYTFQAHAVADGSGNAEQPMDITVIVIDQNDNNPVFTQTTYLGEVAE
ASPIGFEVIKVVATDLDDPSTANADIHYSIISQEPKFPTDLFAINPETGAIRIEVRGLDR
EAHPTHTLVVRAADMEGKGLAGEATVILTVTDSNDNAPVFAQPSYEATVAENKGDTQVTV
MSVTDGDDPQSPAWNAKFTIVSGDPGGLFTVKTRNDKKEGIISTTKGLDFEKSRKHTLLV
AVENDIPFATPLPTATATVLVTVQDVNEAPVFDPVEKLVSKREDLAIDSDVVQYTALDPD
TARKQKVMYRIIRDPAGWLNVDKGTGLIKVKSVMDRESPFVKDNKYTALIGAYDDDEVPA
TGTGTLMIQLEDVNDNAPTIEERSIKVCNKASVPQLLSVTDKDEPGFGAPYSVSLQGTSK
TNWTARMNDSKTGIILNLATELASGDYTVVLRVSDNQGLQQDSTVQATVCDCTGEEVLCK
GRVAGGTNLPVILGILGGILLLLMLLLLLLLFARRRRGEKKEPLLQDDDIRDNIYYYDEE
GGGEDDQDYDLSVLHRGLDNRPEVFRNDVVPSFMPAPRYRPRPANPEEIGNFIDDNLKAA
DNDPTAPPYDSLLVFDYEGGGSDAGSLSSLNSSSSGDQDYDCLHEWGPRFKKLADMYGGG
EDDML
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgctcggttcgcggttttggccattttaatcgccgtttttcaggcctcagat
ttagtgactgctgaggacccaacatgtgtacctggattcgagtcagatgtgttgattttc
aaagtgcctagaaagcgcctgatgcagggcacaagactgggcaaagtgggcttcactgac
tgcacagaccgcacaagatttcttttcaggagtgatgacagacgtttcgtggtacagaca
gacggcatattgacggtaaacagacaggttgttcttcatgaaggacaccaggacttcttc
atccactcctgggacaagcaaggtcgcaaaatgactgttcctgtaagggtattgcaccat
gagcgtcaccatgggaaccaccaccaaaatgttgagcaacaccacaaccatcatccccac
cttactgaatgggactctaatatcgcagagagtacagccgatccacaggtgcctgttctg
catttccccaagtctgccgaagggctgaggaggaagaagagagaatgggtcattcctgat
atcagttttcctgagaatcacagaggacccttcccctttaaagtatctcaaatccgttct
aatgaagataaagtaaagaagatctattacagcatctctggtccaggagctgatcagcct
cctgttggccttttcaccatggacagagacactggtaatctgtatgtcacacaaccactg
gacagagagacagaaaccaagtacacgtttcaagtgcatgctgtggcagatggttcagga
aatgctgaacagcctatggatattacagtgattgtaattgaccagaacgacaacaaacct
gttttcactcaagccacctacctgggagaagttgctgaggcctcaccaataggttttgag
gtgattaaggttgtggccacagatcttgacgatccaagtactgccaacgcagatatccac
tacagtattataagccaggagccaaagtttcccactgacctgtttgccatcaacccagaa
actggagccatcagaatcgatgtccgtgggctagacagagaggcacacccaaaccacaca
ctggtggtacgagcggcagacatggagggaaaagggctggctggagaagcaacagtaatc
ctaactgtcacagatagcaacgacaatgctccggccttcgctcagccctctagtacagcc
gatccacaggtgcctgttctgcatttccccaagtctgccgaagggctgaggaggaagaag
agagaatgggtcattcctgatatcagttttcctgagaatcacagaggacccttccccttt
aaagtatctcaaatccgttctaatgaagataaagtaaagaagatctattacagcatctct
ggtccaggagctgatcagcctcctgttggccttttcaccatggacagagacactggtaat
ctgtatgtcacacaaccactggacagagagacagaaaccaagtacacgtttcaagcgcat
gctgtggcagatggttcaggaaatgctgaacagcctatggatattacagtgattgtaatt
gaccagaacgacaacaatcctgttttcactcaaaccacctacctgggagaagttgctgag
gcctcaccaataggttttgaggtgattaaggttgtggccacagatcttgacgatccaagt
actgccaacgcagatatccactacagtattataagccaggagccaaagtttcccactgac
ctgtttgccatcaacccagaaactggagccatcagaatcgaagtccgtgggctagacaga
gaggcacacccaacgcacacactggtggtacgagcggcagacatggagggaaaagggctg
gctggagaagcaacagtaatcctaactgtcacagatagcaacgacaatgctccggtcttc
gctcagccctcttatgaggcaacagtagcagaaaataaaggagacactcaggtcactgtg
atgtcagtaacagatggtgacgacccacagtccccagcctggaacgccaagttcacaatt
gtcagtggtgatcctggaggacttttcactgtgaaaacaagaaatgacaaaaaagaagga
atcatttctaccaccaagggtcttgactttgagaagagcaggaagcacactctgttggtt
gcagtggagaatgacattccttttgctactccgctgcccactgccactgcaacagtgctg
gtgactgtgcaggacgtcaatgaagctccagtctttgatccagtagagaagcttgtgtca
aaacgggaggaccttgccattgacagtgacgtggtgcagtacactgctcttgacccagac
actgcacgcaaacagaaagtcatgtatagaataattagagaccctgcaggctggctgaac
gtggacaaagggacgggcctgattaaggtgaaaagtgtcatggacagagagtcccccttc
gtcaaggacaacaaatacacagcactcattggtgcatatgacgatgatgaagtcccagcc
acaggaactggtactctaatgatccagcttgaagatgtcaatgacaatgcacccaccatc
gaggaacgttcaatcaaggtgtgtaacaaggcatcggttcctcagctgctgtcggtaacc
gataaagacgaaccgggctttggcgctccatacagcgtctctttacagggcacgtcaaag
accaactggaccgctaggatgaacgactcaaaaacgggcatcatcctgaatttagccact
gagctggccagtggagactacactgtggtcctgagggtttcagacaatcagggcctgcag
caggacagcaccgtccaggccacagtctgtgactgcactggggaagaagtgttgtgcaaa
gggcgtgtggcaggtggcaccaatctgccggtaatcctgggaatactgggaggcatcctg
ttgctgctcatgctgctgttgctgttgctgctgtttgcgagacggagaagaggagagaag
aaggagcctctactgcaggacgacgatatcagagacaacatctattactatgacgaagag
ggaggcggagaggacgatcaggactatgatctgagtgttctgcaccgtggtctggacaac
cggcccgaggtgttcaggaacgacgtggtgccaagcttcatgccggctcctcggtaccgg
cctcgccctgccaacccggaggaaatcggcaacttcattgacgataacctgaaagcagct
gacaatgatccgacagcacccccatatgactccctgctggtgttcgactatgaaggaggc
ggctctgatgcaggaagcctctcctctctgaactcgtcaagcagcggagaccaggactac
gactgcctccatgaatggggaccccgcttcaagaaactggccgacatgtacggaggaggc
gaagatgacatgctctaa
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integrated database retrieval system
