Siniperca chuatsi (mandarin fish): 122884809
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Entry
122884809 CDS
T08948
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122884809 (btaf1)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122884809 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
Vac14_Fab1_bd
HEAT_2
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
122884809
NCBI-ProteinID:
XP_044071139
LinkDB
All DBs
Position
LG11:7540404..7566494
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AA seq
1861 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWDPAPKPKEESCEDLSPEDSSCDRLTFYHFDISRLLKHGASLLGS
AGAEFELQDEKTGEMDPKERLVRQRKLLQKKLGLDMGAAIGMDTEELFNDEDLDYTCQPS
GLRAHGSKATAGSSSRNHVPLQAAELIDSEFRPGMSSRQKNKAKRMAKLVAKQRSKDMDP
NEKSNDSFEGEPEEKRRKTTNVVIDQPATEHKVLIDNVPDNSSLLEETHEWPLESFCEEL
CNDLFNPSWEVRHGAGTGLREILKSHGAGGGKLVGSTAEQMLRQHQEWIEDLVIRLLCVF
ALDRFGDFVSDEVVAPVRETCAQTLGVALRHMNESGVSMTVDVLLTLLKEDQWEVRHGGL
LGIKYALAVRQDLISVLLPRVLPAVTVGLQDLDDDVRAVAASALIPVVEGLVQLLPNKVP
FIVNTLWDSLLDLDDLTASTNSIMTLLSSLLIYPQVRQCSMQQSLTVLVPRVWPFLRHTI
SSVRRAALETLFTLLSKADQSCAIWINPILQDMLRHIFQSCILESNEEILELIQKVWMEL
LSQAPQQYVVAASCPWMGAWLCLMMQASHIPIDLNMLLEVKARSKQDKAGSKGRQGTSQV
KETVQEYIAGAETVTDDPVTRDYVVVRARLMAAKLLGALCGCICDPQLNAASQEIRPAES
LGHLLLFHLNSKSALQRIAVALVLCEWAAVQKDCQVVSSMVQPRLLAILSEQLYYDEIAI
PFTRMQNECKQLIALLADSHIDLQDRLNCSVFTIDQANELVTTIFTESTAGLNVTSKQWQ
ALDSKRQQAQATVTETNTEWQQLHLRVHMFTACAVINLQVLPDKLNPLVRPLMETIKREE
NTLIQGYAASFIAKLLQQCAGRSPCPNPKIIKNLCASACVDSATTPSSACPVPPTQENAK
GVGLEKDCMHHMVNKTRGIITLYRHQRAAFAITSKRGPAPKAPKTPTTELPPGSTISTDN
DEVQRATKSKKPFLIQRRGAEFSLTTVARHFGADLTKSLPYLWENTVGPLRTVVTENQCI
DRQAQLERGDTTAQELVNSLQVLEVMAGAMAAELKPLLLEHLPHLFTCLQHPYTAVRHMT
ARCVGVLSKIAMLETMNSFLECVLPWLADIGDCTKQEGAIEALACVMEQLDVDIVPYIVL
LVVPVLGRMSDPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIRQKARERHFLEQ
LLDGRKLENYKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILA
GDHYLRAQEFAKTKAADCSPMPSLVVCPPTLTGHWVDEVGKFCAKEYLNPLHYTGPPTER
MRLQHQVKKHNLIVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAAN
FRVILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGV
LAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKASVED
SIFTASTEEEEKPKQKATGHVFQALQYLRKLCNHPSLVLTTQHPEYKHIIEQLAGQNSSL
RDIQHAPKLSALKQLLLDCGLGGGGGSEGGTEAVVAQHRVLIFCQLKSMLDIVEHDLLKP
KLPSVTYLRLDGSVQAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHD
WNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKISIANTVISQENASLQ
SMGTDQLLNLFTLDKGEKGEQSPSTSGKASMKSVLDNLGELWDQQQYDTEYNLDNFMHSL
Q
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatcaagactagatcgcttgtttatcctgcttgacaccggaacaacaccagta
accaggaaagcagcagcccagcagcttggagaagtggtcaaactccacccacatgaactc
aataacctcctatcaaaggtcttgacctacctaaggagtcccaactgggacactcgtatc
gcagctggccaagcagtagaggccattgtgaagaatattcctgagtgggacccagccccc
aagcctaaagaagagtcttgtgaagacctgtctccagaggactcctcttgtgaccggttg
actttctaccactttgatatctcccgtctactcaaacacggggcctctctgctgggatct
gctggcgctgagtttgagctgcaggatgaaaaaactggtgagatggacccgaaggaacgt
ctcgtccgccagagaaagcttcttcagaagaagttaggtctggacatgggtgctgcaatc
ggcatggacacagaggagctgttcaacgatgaggacctagactatacctgccaacccagt
gggcttagagcccatggaagcaaagccacagctggatccagctcccgcaaccacgtgccc
cttcaggctgctgagttgattgactcagagttccgcccaggcatgagcagtcgtcagaag
aataaggctaagaggatggccaagctagtggccaaacaaagatccaaagacatggatcca
aatgaaaagagtaacgacagttttgagggtgaacctgaagagaaacgaaggaaaaccacc
aatgtagttattgaccaaccggcaacagagcataaagtcttaatcgacaacgttccagat
aactcaagtcttttagaggagacacacgagtggcctctggagagcttctgtgaggagctc
tgcaatgacctctttaatccgtcatgggaggttcgtcatggtgcaggcacaggtcttaga
gaaatcctcaagtcccatggtgctgggggtggaaagctggtgggaagcactgcagaacag
atgttgcggcagcatcaggagtggatagaggacctggtcatccggctgctctgtgtcttc
gctctggaccgctttggagattttgtatccgatgaggtggtggctcctgtcagggagacg
tgtgcccagacgctcggtgtggcccttcgccatatgaatgagagtggtgtttccatgaca
gttgacgtcctgctgacgctgctaaaagaagaccagtgggaggtccgtcacggaggcctg
ctcgggatcaagtatgccctggctgtccgacaggacctgatctctgttttactgccccgg
gtgctcccagccgtcactgtaggcctacaggacctagatgatgatgtcagggccgtggca
gcttcagccctcatccctgtagtggaaggcttggtacagctactgcccaataaggtaccc
ttcatcgtgaacacactatgggattctcttttggaccttgacgacctcactgcttccacc
aacagcatcatgacattgctgtcctcgctgctcatctacccgcaggttcgacagtgcagc
atgcagcagtcattaacagtcctggtccctcgggtttggccgttcttgaggcacactata
tcatcagtaagacgggcagcattggaaacccttttcacgctgctgtctaaagctgaccag
agctgtgcaatttggatcaaccccatcctacaagatatgctccggcacatcttccagtcc
tgcatactggagagcaatgaggaaatacttgaactgatccaaaaggtgtggatggagctg
ctgtcgcaggcccctcagcagtacgtggtagcagccagctgtccatggatgggcgcctgg
ctttgtctcatgatgcaggcctcacacattcccatagacctgaacatgctcctggaagtg
aaggcccgctccaagcaggataaggctggttcaaagggacgtcaggggacgagtcaggtg
aaggaaacggtccaggagtatatagcaggtgcagagacggtgacggatgacccagtgacg
agggactatgttgtggttcgtgctcgcctcatggctgccaaattgctgggagctctgtgt
gggtgtatctgtgaccctcagctcaatgctgcatctcaggagatccgaccagctgagtct
ttaggccacctgttgcttttccacctcaactccaagtcagccctgcagcgcatagctgtg
gctctggtgctttgtgagtgggctgcagtgcagaaggattgtcaggtggtgtcatccatg
gtgcagcctcgtcttttggctattctgtcagagcagttgtactatgatgagattgccatc
cccttcacacgcatgcaaaatgagtgcaagcagctcattgcactgctagctgattcccac
atagacttgcaagaccgcctcaattgtagcgttttcactattgatcaagccaatgaactg
gtaaccaccatctttacagagtcaacagcgggtctgaatgtgacgtccaaacagtggcag
gcactggacagtaaacgacagcaggctcaagcaacagtgactgagaccaacacagaatgg
cagcaactgcatctgcgcgtccacatgttcacagcctgtgcagtgattaacctgcaggtg
cttcctgacaagctcaacccactggtcaggcctctgatggagaccatcaagcgggaagag
aacaccctgatccagggatatgctgcttcttttatagccaagctgttgcagcagtgtgct
ggacgctcgccctgccccaaccccaagatcatcaaaaacctctgtgcctcggcctgcgtg
gactctgcgaccacaccctcatctgcttgtcccgtaccccccacacaggaaaatgccaaa
ggcgttgggttggagaaagactgcatgcatcacatggtcaacaaaaccagaggcatcatc
accctgtaccgtcaccaaagggcagcgtttgccatcaccagtaagagggggccagcccct
aaagccccaaagacccccaccacagagcttcctcctggcagcaccatcagcactgataat
gatgaggtacagagggctactaaaagcaagaagccatttcttattcaaagacgaggggca
gagttctccctaacaacggttgccaggcacttcggtgcagacctcaccaagtctctgcca
tacctatgggagaacacagtgggcccactgaggacagtggtgactgaaaatcaatgcatt
gataggcaggcccagctggagaggggagacactacagctcaggaactggtcaactctcta
caagtgctagaagtcatggctggggccatggctgctgaactcaaacctttgctactggag
caccttccccatctgttcacctgcctgcagcacccatacacagcagtgcgtcacatgaca
gcacgctgtgtgggtgtgctcagtaagatagcaatgctggagaccatgaacagtttcctt
gagtgtgtactcccctggttagctgatattggtgactgcaccaaacaggagggcgccatc
gaggctttagcctgtgtcatggagcagctggatgtagacattgtaccctacattgtgctg
cttgtagtaccagtgctgggccgtatgagtgaccccagtgatagcattcgtttcatggcc
acacagtgctttgctacactcatccgcctgttgcccctagaggcaggtataccggaccct
ccagccatgtccgctgacctgatccgccaaaaggccagagaacgccacttcctggagcaa
ctactggatggcagaaaactggagaactacaagatccctgtgcccattaaggctgagctc
aggaagtaccagcaggatggagtgaattggctgtccttcctgaacaaatacaagctgcac
gggatcctgtgtgatgacatgggcctcggcaagacgctgcagtccatctgcattctggca
ggagatcattatctcagagcacaggaatttgctaagactaaggctgcagactgcagcccc
atgccctctctggtggtgtgtcctcccacactgactggccactgggtggatgaagtgggc
aagttctgcgccaaagagtacctcaacccactgcactacactgggcctcctacagaacga
atgcggttgcaacaccaagttaaaaaacacaatcttatagtagcctcttacgatgttgta
cggaatgacatcgacttttttagaaatataaaatttaattactgtatccttgatgagggt
catgtcatcaagaacgggaaaaccaaactttctaaagccattaagcaattggctgccaac
ttccgagtcatcttgtcaggaacgcccattcagaacaatgtcctggagctctggtcgttg
tttgacttcctcatgccaggcttccttggaacagaacggcagtttgctgctcgctacggt
aaaccaatcctggctagccgtgacgccaaaagttcctcacgggaacaggaggcaggtgtc
ctggcgatggaggccctgcatcgacaggtgcttcccttccttctgagaaggatgaaggag
gatgtcctgcaggaccttcctcctaaaataattcaggactattactgcaacctgagtcct
ctacaggttcagttatatgaagactttgcaaagtctagagccaaggccagtgtggaggac
agcatctttacagcctctacagaagaggaagaaaagcctaaacagaaggccacgggccac
gtcttccaggcgctgcagtacctgcgaaagctgtgtaaccacccgagcttggtcttgacc
acgcagcatccggagtacaaacacattattgagcagctggcaggtcaaaactccagcctg
cgggacattcagcacgcacccaaactctccgctctcaaacagttgctgttggactgtggt
cttggtggtggtggaggatcagaggggggcactgaagcagtggtggcccagcaccgtgtg
ctaattttctgtcagctaaagagtatgctggatattgtggagcatgacctgctgaaaccc
aaactgccctctgtcacctacctgaggctagacggcagtgtgcaggccggcctgcgccac
tccatcgtttccaggtttaacaatgacccatccattgacgtgctgctgctaaccactcat
gttggaggtctgggtctgaacctgactggtgcagacactgtggtgtttgtggaacatgac
tggaaccccatgagggatctgcaggccatggatcgtgcccataggataggacagaaacgg
gttgtgaacgtgtacaggctgatcacacgaggcacactggaggagaagatcatgggtctg
cagaaattcaagattagcatcgccaacactgtcatcagccaagagaacgccagcctgcag
agcatgggcacagaccagctcctcaacctcttcactctagacaagggtgagaagggtgag
cagtcgccgtcaacctcagggaaggcctccatgaagtctgtgctggacaacctgggagag
ctatgggaccagcagcagtacgacacggagtacaacctggacaacttcatgcactctctg
cagtag
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