Siniperca chuatsi (mandarin fish): 122884921
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Entry
122884921 CDS
T08948
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03008
Ribosome biogenesis in eukaryotes
schu03013
Nucleocytoplasmic transport
schu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122884921 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
122884921 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122884921 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122884921 (xpo1b)
03009 Ribosome biogenesis [BR:
schu03009
]
122884921 (xpo1b)
03016 Transfer RNA biogenesis [BR:
schu03016
]
122884921 (xpo1b)
03036 Chromosome and associated proteins [BR:
schu03036
]
122884921 (xpo1b)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122884921 (xpo1b)
Ribosome biogenesis [BR:
schu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122884921 (xpo1b)
Pre-60S particles
122884921 (xpo1b)
Transfer RNA biogenesis [BR:
schu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122884921 (xpo1b)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122884921 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
Hydrolase_3
BspA_v
Motif
Other DBs
NCBI-GeneID:
122884921
NCBI-ProteinID:
XP_044071366
LinkDB
All DBs
Position
LG11:5714583..5743770
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASNV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITSEIPQIFDAVFECTLNMINKNFEE
FPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKITT
VLNPASPTNNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcagaccatgcagcacagcagctgctggacttcaac
cagaaactggatatcaacctgctggataatgtggtgaactgtctatatcatggggtggga
ccacagcaaagaatggcacaggaagtgttgacacacttaaaagagcacccggatgcctgg
acgagagtggacaccatccttgagttctcccagaacatgaacaccaaatactatgctctt
cagattctggaaacggttatcaaaacaagatggaagattcttcccaggaatcagtgtgaa
ggtataaaaaagtatgttgttggtctcattatcaagacttcatcagatgcatcaaatgtg
gagaaagaaaaggtgtacattgggaagctgaacatgatccttgttcagatcctgaagcag
gagtggcccaaacactggcccaccttcatcagtgacattgtgggtgcaagtcgtaccagc
gagagcctttgtcagaacaacatggtcattctcaagctgctcagtgaggaggtctttgac
ttctccagtggccagatgacccaggtcaaagccaagcacctaaaagacagcatgtgcaat
gaattctcgcagatattccagctttgccagtttgttatggaaaattcccagaatgccccc
ctggtacacgccactctggagaccctcctacgttttctcaactggattcctctgggatac
atctttgaaaccaagttgatcagcacattggtgtataagttcttgaatgtgcccatgttt
cgcaatgtgacactgaagtgcctcactgagattgctggtgtgagcgtcagccagtatgag
gagcagttcgtcacactcttcaccctgaccatgtgtcaactcaaacagatgctgcctctg
aacaccaacattcggctggcctactccaacgggaaagatgacgagcagaacttcatccaa
aacctcagtctgttcctctgtactttccttaaagagcacgggcagctcattgagaagcgg
ctcaacctcagagaaacattaatggaggccctccactacatgctgctggtgtcagaagtg
gaagagactgagatcttcaaaatttgtctggagtattggaaccacttggctgctgagctg
tacagagaaagtcccttctctacgtccacgtcccccctgctctctggcaaccagcacttt
gacgtgccaccacgcagacagctctatctgcctgtactctccaaggtgcgtctgctgatg
gtaagtcggatggccaagccggaggaggtattggtggtggagaatgaccagggagaggtg
gtcagagagttcatgaaggacaccgattccatcaacctctacaagaacatgagggaaacc
cttgtgtacctgactcacttggactatgcggatacagaacgcataatgacagagaagctt
cacaaccaggtgaacggtaccgaatggtcctggaagaacctcaacacgttgtgctgggcc
attggatccatcagtggggctatgcatgaggaggatgagaagaggttcctggtcactgtc
atcaaggatctgctgggtctgtgtgagcagaagagaggaaaggacaacaaggccatcatt
gcctccaacatcatgtatattgttggccagtatccacgctttctcagagcccactggaag
ttcctcaaaactgtggtcaacaagctctttgagttcatgcatgaaacccatgatggtgtt
caggacatggcctgtgacaccttcatcaagattgcccagaagtgccggcgccattttatc
caggtgcaggtgggagaggtgatgcccttcatcgacgagatcctcaacaacatcaacacc
atcatctgtgaccttcagcctcagcaggtacacacgttctatgaggcagtaggttatatg
attggggcccagacagatcaggctgttcaagagcacctgatagaaaaatacatgctgctg
cccaatcaagtgtgggacagcatcatccagcaggccaccaagaatgtggacatcttgaag
gacccagagactgtgaaacagctgggcagcatcctgaagaccaacgtcagagcctgtaag
gctgtgggacacccctttgtcatccagctgggacggatttaccttgacatgctcaacgtc
tacaagtgcctcagcgagaacatctctgctgccattcagacaaatggtgagatggtgacg
aaacagcccttgatccggagtatgagaacagtgaaacgagagacactgaaactgatctca
ggctgggtcagccgatcaaacgacccacagatggtaggggagaactttgttccaccgctg
ctggacgcagtcctcattgactaccagcgcaatgtccccgctgcccgtgaacccgaggtc
ctcagcaccatggcaaccatcgtcaacaagctggggggacacatcaccagcgagatacct
cagatctttgatgccgtcttcgagtgcaccctaaacatgatcaacaagaactttgaggag
ttcccagagcacaggacccacttcttctacttattacaagctgtaaactctcactgcttt
cctgcattcctcgccatcccccctgcccagttcaaactggtgctggactccatcatctgg
gccttcaaacacactatgaggaacgtggctgatactggtctgcagattctgtacacgttg
ctgcagaatgtggcccaggaggaagcagccgctcagagtttctatcagacgtatttctgt
gatatcctacaacacatcttctctgtggtcactgacacatcacatactgctggcctgacg
atgcatgcgtccatcctggcctacatgttcaacctggtggaggaggggaagatcactaca
gtgctaaaccctgccagccccaccaacaaccaggtgttcattcaggaatacgtggctaac
ctgctcaagacggccttccctcacctacaagatgctcaggtgaaggtgtttgtgaccggg
ctgttcagcttaaaccaggacattcctgccttcaaggagcaccttagagacttccttgtc
cagataaaggagtttgcaggcgaggacacctcagacctgttcctggaggagagggaggcg
tcacttcgtcaggcccaggaggagaaacacaagatccagatgtcagtcccgggcatcctc
aaccctcacgagatccctgaggagatgtgtgactga
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