Siniperca chuatsi (mandarin fish): 122884971
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Entry
122884971 CDS
T08948
Symbol
gbf1
Name
(RefSeq) Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122884971 (gbf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122884971 (gbf1)
Membrane trafficking [BR:
schu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
122884971 (gbf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
TPR_28
Sec7-like_HUS
TNFAIP8
DUF1045
Motif
Other DBs
NCBI-GeneID:
122884971
NCBI-ProteinID:
XP_044071465
LinkDB
All DBs
Position
LG11:2944383..3066114
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AA seq
1876 aa
AA seq
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MLDKNIYIVQGEISTVVGAIKRNSRWNTHTPLDEEQDPLLNSFGHLKEILNNIKELSDVE
PNVFLRPFLEVVRSEDTTGPITGLALTSVNKFLSYGLIDANHEAAAEAIENMADAVTHAR
FVGTDPASDEVVLMKILQVLRTLLLTPVGAHLTNESVCEIMQSCFRICFEMRLSELLRKS
AEHTLVDMVQLLFSRLPQFKEEAKSYVGANMKKLKMRAGGMSESSKWKKQKRSPRPPRHM
VRSPTGEMDPTQSSTLSNNNLSGGVPFIEQGLSSLPASDSAGSSISSPPTTDSGLDTCSK
ATSREDLSDLEQFSSSATTPNTATTLPGTDPGSPDAQSEGRQFLPAQSASVESIPEVLED
KDSITEQADSTSVHDMDYVNPRGVRFTQSTQRDGASLIPYGLPCLRELFRFLISLTNPND
RHNTDAMMHMGLQLLTVALESAHIANYQTLLGLVKDELCRHLFQLLSMDRMNLYASSIRV
CFLLFESMRVHLKFQLEMYLKKLMDIITSENIKMPYEMKEMALEALVQLWRIPSFVTELY
INYDCDFYCSNLFEDLTKLLSKNAFPVSGQLYTTHLLSLEALLTVIDSTEAHCQAKVVNS
TAQQDQSETLLAEGERSTKNGMDTSSDLNRLGSTNGLSLAQAENAPVCPPTSGHLMAERM
RLGRQDQGDNDTAEKIAPKKPERFSSCLPDSQELIEIRTKKKLLITGTEQFNQKPKKGIQ
FLQEKGLLSNPMDNNRVAQWLRENPRLDKKMIGEYISDRKNMELLDSFVNTFTFQGLRID
EALRLYLEAFRLPGEAPVIQRLLETFTDNWHKVNGSPFMSNDAGFALAYAVIMLNTDQHN
HNVRKQNIPMTVEQFKKNLKGVNGKKDFDQDMLEDIYNAIKNEEIVMPDEQTGLVKENYV
WSLLLHRSATPEGVFLHLPPGSYDHDLFTMTWGPTIAALSYVFDKSLDDNIIQKAITGFR
KCAMIAAHYGFSDVFDNLIISLCKFTTLSSESVENLPTVFGSNSKAQTAAKTVFDLAHRH
GNILREGWKNIMDSVLQLFRAELLPKAMVEVEDFVEPNGKISLQREETPSNRGESAVLSF
VNWLTLSGAEQSGLRGPSTENQEAKQAAILCIKQCDPEKLITESKFLQLESLQELMKALI
SVTPDEETYDEEDAAFCLEMLLRIVLENRDRVSCVWQTVCDRLCHLCVQANESCFLVERA
VVGLLQLAIRLLRREDISSQVLLSLRRLLMMKPHVLSRVSREVAYGLHELLKTNAANIHC
TDDWYTLFSLLECIGAGVKPPASFQLTSTTTDNDTGAQSDSELSSHHPSEVSVDRGYTSD
SEVYTEHSKSRIPRSTTDVDVASSGWLVVGKDDLEINKTPPVNSKAQLNHPLVNQYSLTL
GQDLGQHDTKSLIKCVETLSFIVRDAAHVTPDNFELCVRSIRVFVEASLNGGYRNHDKKK
GHKYDSKSRMRKKAGGREKEGGGGMRRGGSRASSQRPSRSHSDDEEDESVPASYHTVSLQ
VSQDLLDLMHTLHTRAASIYSSWAEEQRHLEAAGRKIEADSQTLWTSCWCPLLQGIAWLC
CDARRQVRMQALTYLQRALLVHDLQTLDATEWESCFNKVLFPLLTKLLDNISPADVGGME
ETRMRACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAGSSDLLLEAIPESLKN
MLLVMDTAGIFHSADSRTGYSDLWEITWERIVCFLPHLREELFKQTVIPDPVPSPPAEPV
QPTPPAGRPPSPQLSPPPAQLPSPIPVPITPAETQTPSRPVSPQEPHPASANGSDRSSPV
PPSIRPMPVPLTTSPAQTPSPLSQSPLILQPLASPLQVGVPPMSLPIILNPALIEATSPV
PLLPGPRPTSPSDEVK
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgttggacaagaatatctacattgtccagggtgaaattagtactgttgttggagctatc
aagaggaactccagatggaatacgcacactccactggatgaagaacaggacccgttactt
aacagctttggtcacctcaaggaaatactcaacaacataaaagagctgtcagatgttgaa
cccaacgtttttctgaggccgttcctagaagtagtccgctctgaggacaccactggacca
atcacaggccttgcccttacctctgtcaacaagttcctttcctatggccttatagatgct
aaccatgaagcagcagcagaggccattgagaacatggcagacgcagtcacgcacgctaga
tttgtgggaactgaccctgccagtgatgaagtcgtccttatgaaaattttacaggtcctg
aggactctgctgctgacgccagtcggagcccatctgaccaatgagtctgtttgtgagatc
atgcaatcctgcttcaggatctgcttcgagatgcgcctaagtgagctcctcaggaaatca
gctgaacatacactggttgacatggtgcagctactgttctccagactacctcagtttaaa
gaggaggccaagagttatgtgggtgccaacatgaagaagttgaagatgcgtgccggtggg
atgagtgagtcatccaaatggaagaagcagaaacgttcgccaaggccacctcgccacatg
gtccgaagtcccactggtgagatggacccaacccagtccagcaccctcagcaacaacaac
ctttcaggtggtgtcccattcattgagcaaggcttgtctagcctaccagcttcagacagt
gctggttcgtccatttccagcccgccaaccacagacagtggcctggacacctgttctaaa
gccacctccagggaagatctttctgacctggaacaatttagctcatctgcaaccacccct
aacactgctaccacactccctgggactgatcctggctctccagatgcacagtctgaaggc
aggcagtttttaccagctcagtcggcctcagtggagtccatccctgaggttctggaggac
aaagactccattacagagcaagcagacagcacctctgtccatgacatggactacgtcaac
cccagaggagtccgttttacacagtccacacaaagagacggagcatctctcatcccttat
ggcctgccatgtctaagggagctatttcgcttcctgatctcactgaccaaccccaatgac
cgccacaacactgatgccatgatgcacatgggcttgcagctgctgactgtagcacttgag
tcagcacacattgctaactaccagactttactaggactggtcaaagatgagctctgcaga
catctcttccagttgctgagtatggaccgtatgaacctatatgcttcctccattcgagtt
tgcttcttgcttttcgaaagcatgagagtacacctaaagtttcagctcgagatgtaccta
aagaaactgatggatatcatcacgtcagagaacattaagatgccgtatgagatgaaggag
atggctctggaggcactggtccagctgtggaggatccccagctttgtcactgagctgtac
atcaactatgactgtgacttctactgctccaatctgtttgaggacctcacgaagctgctg
tccaagaatgcattcccagtgtcagggcagctctacaccacccacctcctgtcactggaa
gctctgctcacagtgattgatagcactgaagcccactgtcaggccaaggtggtcaacagc
actgctcaacaagaccagtcagaaacactgctggcagagggagaacgttcaaccaaaaat
ggaatggacacttcatctgatcttaatagactgggcagtaccaatggtctgagtcttgca
caagctgagaatgcaccagtgtgtccaccaaccagtggacatctgatggcagagaggatg
agactgggtagacaggatcaaggagacaatgacactgccgagaagatagccccgaaaaaa
cctgaacgtttctcgtcatgtttacccgattcccaagagttgattgaaattagaacaaag
aaaaagctgctgatcacaggcacagagcagtttaaccagaagcccaagaagggaatccag
ttcctgcaagagaaaggcctcctcagtaacccaatggacaacaaccgggtggcccagtgg
ctcagagaaaacccccgactggacaaaaagatgattggcgagtacatcagcgatcgcaag
aacatggagctcctagacagctttgtaaacacattcaccttccagggacttcgtattgat
gaggctctgcggctctacctggaggcctttagattacctggagaggctcctgtcatccag
agactcctggaaaccttcacagacaactggcataaagtgaacggctctcctttcatgagc
aacgatgcaggctttgccttggcctacgctgtcataatgctgaacactgaccagcataac
cacaatgttcgcaagcagaacatcccaatgactgtcgagcaattcaagaaaaatctgaag
ggagtaaatggaaaaaaagactttgaccaggacatgttggaggatatctacaatgctatc
aagaatgaggagattgtgatgccagatgagcagacagggttggtgaaggagaactatgta
tggagtttgttgctacaccgcagcgccacacctgagggtgttttcctccacctgccaccc
ggcagctatgatcatgacttgttcaccatgacttggggtcccaccatcgctgctctttcc
tatgtctttgacaagagcctggatgacaacatcatccagaaggctatcactggcttcagg
aaatgtgcaatgatagcggctcactatggcttcagtgatgtttttgataatttgatcatc
tccctttgcaagttcaccactctgagcagtgagtctgtggaaaaccttcctacagtgttt
ggcagcaacagtaaggcacagacagcagccaagacagtgtttgacctcgcccatcggcat
ggcaacatcctgagggagggctggaagaacataatggactcagtactacagctgttcaga
gccgagctcctgcccaaagccatggtcgaggtggaggattttgtggagccaaatgggaaa
atttctcttcaaagagaggaaacgccttcaaatcgtggtgagtcagcggtgttgagtttt
gtcaactggttgacgttgagtggagccgagcagtcgggactcagaggaccgtccacggaa
aaccaggaggccaagcaggccgccatcctctgcataaaacaatgtgacccagaaaagctg
atcacagagagtaaattcctacagttggagtctctacaggagctaatgaaggctctgata
tcagttaccccagatgaagagacttatgatgaagaggatgctgccttctgcttggagatg
ttgctgcgtatcgttctggagaaccgagaccgtgtgtcatgtgtctggcagaccgtgtgt
gaccgcctctgccacctttgcgtccaagccaatgagagctgcttccttgtggagagggct
gtggtgggactccttcaacttgcaatccgcctgctacgacgagaagacattagctctcag
gttctcctttccctgcgtcgcctgctgatgatgaaacctcatgtcttgtcccgggttagc
agggaggtggcatatggccttcatgagctgctgaagactaatgcagctaacatccattgt
acagacgactggtacacactcttctccctgctggagtgcatcggagccggagtgaaacct
cctgcctctttccagctgacctccaccactactgacaatgacacaggagcccagtcagat
agcgagctgtcatctcatcatcccagtgaagtgagtgtagaccgtggctacacgtctgac
tcagaggtctacactgagcacagcaagtccaggatccctcgctccacaacagacgtggat
gtagcaagcagtggatggcttgtggttgggaaagatgacctggagataaataagacccct
ccagtaaactctaaagctcaactgaatcacccattggtcaaccagtacagtctgacgctg
ggccaggacctgggccagcacgacacaaagtctctcatcaagtgtgtggaaacactctct
ttcatcgtgcgtgatgctgcccacgtcacccctgacaactttgaactgtgtgttagatct
atacgagtgtttgtggaggccagcctcaacggaggttaccgcaaccacgacaagaagaag
ggccacaagtacgactctaagtcccggatgaggaagaaggcagggggaagggagaaggag
ggtggaggtggcatgaggcgaggtggcagccgggcgtccagccagcgtccatcacgttcc
cacagtgacgacgaggaggacgagagtgtcccagccagctaccacacggtgtcattacag
gttagtcaggacctgttagacctgatgcacacactgcacacccgggctgccagcatctac
agctcctgggcagaggagcagcgccatctggaggctgcaggcaggaagatcgaggctgat
tcccagactctatggacaagctgctggtgcccgctgttgcaaggcattgcttggctgtgc
tgtgatgccagacgacaggttcgtatgcaggccctcacctacctccagagggcactgctg
gtccatgatctgcagacacttgacgcaactgagtgggaatcctgcttcaataaggtgctt
ttccccctgttgactaagctgcttgacaacatcagcccagcagatgtgggcggtatggag
gagaccagaatgagagcctgtacactgttatcaaaggttttcctccaacacctctctcct
ctgctgtccttgcctacctttgctgccctctggctcaccattttggatttcatggacaag
tacatgcacgcaggatccagtgacttactgttggaggcaatccctgagtctctgaagaac
atgctgctggtgatggatacagcaggcatcttccacagtgctgactccaggacaggatac
tcagacctgtgggaaataacttgggaacgaattgtctgcttcctgcctcacctgagggag
gagctcttcaaacagactgtcataccagatccagtacccagtcctccagcagagcccgtg
cagccaacacccccagcaggccggcctccatcccctcagttgtctccaccacctgcccag
ctgccctccccaatcccagtcccaataacccctgcagagacacagaccccgagcaggcca
gtatcaccccaggagccccatccagccagtgccaatggatcagacagatcgtctccggtc
ccaccctcaattcgccccatgccggtaccgttaacgacgtcccctgcccagactccttca
cccttgagccagtcccccctcatcctgcagcccctcgcctctcccttgcaggtgggagtc
ccgcccatgtccctgccaatcatcctgaaccccgccctcatcgaggccacgtcgcctgta
ccgctgcttcctggtcccagacctacaagtccttctgacgaggtcaagtaa
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