Siniperca chuatsi (mandarin fish): 122885012
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Entry
122885012 CDS
T08948
Symbol
lss
Name
(RefSeq) lanosterol synthase isoform X1
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu00100
Steroid biosynthesis
schu01100
Metabolic pathways
Module
schu_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
122885012 (lss)
Enzymes [BR:
schu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
122885012 (lss)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
DUF7374
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
122885012
NCBI-ProteinID:
XP_044071485
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Position
LG12:complement(4348001..4359032)
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AA seq
735 aa
AA seq
DB search
MTEGTHLRRRGGPYRTEPATDMSRWRLTNVEGRQTWRYVEDQDTPDREQTMLEAHSLGLD
TSKFVSGSPAARTAVHAALKGMHFYSHLQAEDGHWAGDYGGPLFLLPGLLITCHVAKIPL
AEAWKKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTVLSYISLRILGVEPDDPDVVRARNN
LHSKGGAVGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPTWMPAHPSTLWCHCRQVYLP
MSYCYAVRLTAEEDSLVLSLRQELYVQDYATINWPAQRNNVAACDMYTPHSTLLTVAYMV
LNVYEAHHSTTLRGRAVKELYEHIQADDRFTKCISIGPISKTINMLVRWYVDGPSSPAFQ
EHVSRIPDYLWLGLDGMKMQGTNGSQLWDTCFAVQAFLEAGAQDNPRLAECLRDAHQFLT
ITQIPENPPEYQKYYRQMNKGGFPFSTRDCGWIVADCTAEGLKSVMLLQELCPSIGQPVT
SERLYDAVNVLLSMRNSDSGFATYETKRGGKLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALRHFQKAYPEHRAEEISSTLRDGLEYCRRVQRPDGSWEGSWGVCFTYGIWFGLEAFACM
GHVYKDEDVCVEVQKACQFLLDLQMSDGGWGEDFESCEQRRYVQSSTAQIHNTCWALLGL
MAVRHPDRRAIERGIQLLIDKQLPNGDWPQENIAGVFNKSCAISYTSYRNVFTVWTLGRF
STLYPSSPLAGKVKL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgactgagggaacgcacctgcggaggcgaggggggccgtacaggacggagccagccaca
gacatgagccgctggaggctgactaatgtcgagggcaggcagacctggcgctatgtggaa
gatcaggacaccccagacagagagcagacgatgctggaagcccattctctaggcttggat
acgagtaagtttgtgtctggctccccagctgcccgcacggctgtacatgcagctctgaaa
ggtatgcacttctacagccacctccaggccgaggacggtcactgggcaggggactacggc
ggacctctcttcctgctcccaggtctcctgatcacatgccatgtggctaagatccctctg
gccgaggcctggaagaaagagatggtgaggtacctgcgctccgttcagctgccagatgga
ggctggggtctgcatattgaagataagtctactgtctttggcacagtgctgagctacatc
tcattaaggatcctgggagtagagcctgatgatccagatgtggttagagccaggaacaac
ctgcacagcaaaggcggcgctgtggggattccctcatggggtaaattctggttggccatt
ttaaatgtctacagttgggagggaatgaacacactgctaccagagatgtggctgttcccc
acttggatgccagcccacccctctaccctgtggtgtcactgtcgccaggtctacctcccc
atgagctactgttatgctgtcagactgactgcagaggaagactccctggtcctcagcctc
agacaggagctttatgtccaggactatgccaccattaactggcctgctcagaggaacaac
gtggcagcgtgtgacatgtacacacctcacagcacactgctcaccgtcgcctacatggtg
ctgaatgtgtacgaagcccaccacagcaccacactgagaggaagggctgtcaaagaactg
tatgaacacatccaggctgacgaccgcttcactaaatgtatcagcattggaccgatctcc
aagactatcaacatgctggttcgctggtatgtggatggtccctcctctccagcctttcag
gagcatgtgtccaggatcccagactacctctggttgggattagatggcatgaaaatgcag
gggaccaatggctctcaactctgggatacttgctttgccgtacaggctttccttgaggca
ggagctcaggataaccccaggctagcagagtgcctccgagatgcccatcagtttctcacc
atcacacagatacctgagaatcctcctgagtaccagaagtactacagacagatgaacaag
ggaggcttccccttcagtacccgcgactgtggttggatcgtggctgactgcacagcggag
ggcctgaaatcagtgatgctgctgcaggagctctgtccctccattggccagcctgtcacc
tcagagcgcctatatgatgctgtcaatgtgctcctgagcatgagaaactctgacagtgga
tttgccacatatgaaaccaagagaggagggaaactcctggagctactcaacccctctgag
gtgtttggtgacatcatgatagattatacctatgtggagtgtacctcagcagtaatgcag
gctctgaggcacttccagaaggcctatcctgaacaccgtgctgaggagataagctccact
ctaagagatggactggagtactgcaggagggtgcagaggcctgacggatcctgggaagga
tcctggggagtgtgcttcacatatggaatatggtttggccttgaagcctttgcttgtatg
ggacatgtctacaaggatgaggatgtgtgtgtggaggtgcagaaagcttgtcagttcctg
ttggacctgcagatgtcagatggaggctggggggaggactttgagtcgtgcgagcagcgg
cgctacgtccagagcagcactgctcagatccacaacacctgctgggctttattaggcctc
atggctgtcaggcatcctgaccggcgggccattgagagaggaatacagctgctgattgac
aagcagctgcccaacggagactggccacaggagaatattgcaggtgtgttcaacaagagc
tgtgctatcagctacacctcctacagaaatgtcttcacagtctggaccctcggccgcttc
tccacactttaccccagcagtccattggctgggaaggtcaagctgtga
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