KEGG   Siniperca chuatsi (mandarin fish): 122885033
Entry
122885033         CDS       T08948                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:schu03032]
    122885033 (rif1)
DNA replication proteins [BR:schu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    122885033 (rif1)
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4
Other DBs
NCBI-GeneID: 122885033
NCBI-ProteinID: XP_044071559
LinkDB
Position
LG12:complement(25481347..25505316)
AA seq 2541 aa
MMATAEPPSGSSFLPLLETLEDGAAGQSEQTDAYLTIANRLSGEDGRQFLPAVEKHFSRF
GKAILAHITSPNAELSQAALQALGFCLYHSHIVSGVSETFAAEILSALCSLVVKSTDKNT
CTRALWVISKQSFPPDVVAKKVSSILGTLESVWSREDIQSVVMEHEALNVVIRMLEQVPA
QMGEGVVRWAKLVIPLVVHSASRVRLRAAAAMEMGMPLLLEKQMEVAAIIEPMMSSKLIP
ELQKLFMSKNETNVLKLWPLFVKLLGKLLHRGGPFINSLLHLEELGFRSSSPTIKKIAFI
AWKSLIDNFALNPDILCSSKRMKLLMQPLASIHVRTEALLLTKVEVWWYLVVQLGPNLSP
NFDQISVPLLQCTIGSDSSSVPGTPSRAVSQNGAVTPGTPKTGTSGFNSSANTSRMSLNS
SVQIPSTFPSIQLLGLEMLLHYFLGPEVIATAAKNKLILSLEPLNHPLVSGASSFTKHAA
VLTSNIRDGFTNIGKDAPDSLLALIWTSLVRCVNLTIESVGSKKDRQGCEVLTLMLQALQ
SIVTSEAVPADKVLILFEATVKGLPQRVLGSATYQVGKMDVLNGTPALFLILLLYNSSML
SAYIEDERFFQCLQTLVACGLSGPTSPLAFGEAVLGAIRCSAGSVQDKERLWMMWSVMVS
PLTDTITQSNEVNQGDALEHNFSAMHSALLFPITHLLRGTPLQQAAQKSMLSSWSKLYKV
FARCSALVVTAEENICCEELCAKMTAAIDRDTLMVPSTLNAVATFLQVMVECVDFSPYTP
QFQQKLKSPHTPVNWMRKRNKVLGNLSTFQSLLVQCLEVYLEGTEASSEATGLALVSVLS
ALFTNLVLANTVKEALTSLIQPLTLFYKQAASEPPKFTSQLLGKLEKLLCEVLGCLQARS
TLAYNDELLALLSPLLCVLFPHKNKQIRTSVVQFWNSAFANSVSLTYPDEIRPILSQVKQ
KTPIILPGFEVVSVPDELSGQYSSENSQLETKLSGMPVSSVGKRDSLLGKAAELKDRSST
KTSKPVSTKLDFGSPKPPRRDVLEEEASIDFVFIPPETKERVLTEHQKEVKRTKRVDIPA
MYNNLDASLDTTVFTQYTQSQEDSLDKQPTEQTEEVTKETPGKVLQEDVENEEDIEVLTE
TQDYASPKAVDNMTENHEQEEMIPESADVSMEVSMDTKSGDRAEDLDMQSKEGTSPNISS
SSDLVSGTPQKPNSRRQSFITLEKYAEGKPASPSSASTFTGPLIKTSRSQERSNTNKTSS
SQDSQSTQAGKINMQCPVNDAPESPRRPKDSGTKCEPVRLTERLPSDTTEDEDVIPDTQA
EVEGKESTKIASALEEMKPSSQEEESEPTLDDSQSSVTQTTPGEPRRSGRYRVRPLLPGE
DPEEREDKYTLFKRRRSGEEPKSDSPKLSSMQSRPNTRSKQGAEEDNGRDRLRTRAQRDK
SESSQTNSQGRSHKIKLYNNSEEFLYKPEPRRRSTREHESSQTDLRSDTQSDYEMQSQGR
PSRRSKSSLETKEEGGMKKKVLPDKKESSQTATHEHELVEQVEKDKPKRDSQMITPSSQT
GGKSQEVELVEQTEKDGGKLKDSQMITPSPQTGGKSQKFELVEQTEKDGDKPKKDSQMTT
PSPQTGGKSQKFELVEQTEKDGDKPKKDSQMTTPSPQSGGKSQEFEFIEKKAKREKRDSQ
IVASSTNDQSQDRKSTTNKLLNESEVKDELKTREGTDDNLSQEDSQVITPSSSDSQSLRR
SRRSKASSESEEKSENKDSLGRQSRSNSQAALSAVGQAEARIGGRTRRSKVQEEQSKSSP
SSTPESSQSLDIAGSTESSQGRGRYSRRRNSQALVANIESSESESSEARENSPMPKKRGR
KPRASLQSPLTLESKEDKINNDMGMDCSDTSQKADTQSIEAKKTDLEDSPKTPDLQGSES
LQVTHNIEEPSNEESPMEVEVDTVVPKTEADNTKSKSLSVSPRKEEQRQKDSETNLDNSS
SQESDTGDFQSAEMLESVGISTEQTQEKVPCDPSVTSAVEALAPSNETTEKLQASESSEK
EDEQVSEPVVNVTENQNDDSHSNQQEHPVVPVEDAVDDSHSTSFGQNQMACQDVIEDFSK
EEEESASIKEGKSTNQPTETSAGDDITPLQESDKDSKTQSMECQDEEETQTTNAENDVAA
NLDAALAGVCNTSVLSESTSKEAFPDSPAKQKDLEAVMGADVVQSPSSGRTRGTWSPSAS
PSTSILKKGQKRPLEDETPSPLVKSRRVSFADPIQHQEIADDIDRRSPAIRTSSPRRSKV
SGIPQPKYVTTPTKGLLVLSPRNLHSPGYKSSKKCLISEMSKEPRPVSRDCIYPALVGCS
TPVEAVLPQISSNMWSRGFGQLVRARNIKTVGDLSALTPSEIKTLPIRSPKISNVKKALK
IYEQQRKGRGGDELKSFDEMEMMTSELEETSAPQNQDEEDKTSVETLATELVDELVSADG
RPEQEGSGNQTTDAPAGQQRPEEHPEGLLSEVEALTCRMTPLELGYCSPQQLVQMHDQLG
GMMRCVVVELQTRLCQTDGKP
NT seq 7626 nt   +upstreamnt  +downstreamnt
atgatggcgactgcggagcctccgagcggctccagcttcctccccttgctggagactctg
gaggacggcgctgctggacaatctgagcagacggacgcctacctcaccatcgccaatcgg
ctcagtggagaggatggccgccagtttctccctgcagttgaaaagcacttttctcgtttc
ggtaaagccatcttggctcatataacaagtccgaatgctgagctgagccaagctgccttg
caagctttagggttttgtttgtaccattctcacatcgtctctggagtgtctgaaaccttt
gcagcagaaatactgtcagcactttgctccctggtggtgaagtcaacagataagaacaca
tgcaccagagcattatgggtcatctcaaaacagagctttcctccagatgtggttgccaaa
aaagtgtcgtctatactgggaacgctggagagtgtgtggagcagagaggacattcagtct
gtggtaatggagcatgaggccttgaacgtggtcatcaggatgctggagcaagtgccggcc
cagatgggtgaaggagtggtacgatgggcgaagcttgtcatcccgctggtggtccactct
gcctccagggtgcgtttacgggccgcagcagccatggagatgggcatgcctcttctcctg
gaaaagcagatggaggtggctgctatcatcgaaccaatgatgtcctcaaaactgatccca
gagctccagaagcttttcatgtcaaagaatgaaaccaatgtcctaaagctctggccctta
tttgtgaaacttctcgggaagttgctgcacagaggaggacccttcatcaactctctgctg
catctggaggaacttggtttccgcagctcttctcctaccattaagaagatcgccttcatt
gcctggaagagcctcatagataactttgccctcaatccagacatcctgtgcagtagcaaa
cgtatgaagctcctgatgcagcccctcgcatccatccatgtcaggacagaggccctgctg
ctcaccaaggtggaggtctggtggtacctggtggtccaactcgggcccaacttgtcaccc
aactttgatcagatttctgttcctctgctccagtgcaccattggctctgactcctcttct
gtcccaggcaccccttctagagctgtcagtcaaaatggtgctgttacccctggtacaccc
aagactggcacttcaggctttaacagctcagccaatacgtctcggatgagcctgaactcc
agcgtccagatcccctccaccttcccctccatccagctgctgggcctggagatgttgctt
cactattttctgggaccagaggttattgccacagctgcaaagaacaaactcatcctgagt
cttgagcccttgaaccacccactcgtctctggtgcttcctctttcactaaacatgctgct
gtgctcacctcgaacatcagagatggattcaccaacatcggcaaagacgctccagattct
cttttggctctcatatggacgagtcttgtccggtgtgtcaacttaactatagagtctgta
ggcagtaagaaggatcgtcagggctgtgaagtactgacactgatgctccaggctctgcag
agcatcgtcacctcagaagctgtgcctgcagacaaagtcctgattctgtttgaggccaca
gtgaaaggtcttccccagagagttcttggctctgccacctatcaagtgggcaagatggat
gtgctaaatggaacgccggctctgttcctcattctgctcctctacaacagcagcatgctc
tcagcctacatagaagacgagaggttttttcagtgccttcaaacgctggtggcctgtggg
ttgtcgggccccacttcccctctggcgtttggggaggcggtgctgggggccatcagatgc
agcgctgggtctgtgcaggacaaggagcggctgtggatgatgtggagtgtgatggtcagc
ccgcttactgacaccatcacacagtctaatgaagtcaaccaaggtgacgctctggagcac
aactttagtgccatgcactcggccttgttgtttcccattacacacctactacgcggcaca
ccactacagcaggcggcccagaagtcgatgctgtcttcgtggtccaagctgtacaaagtg
tttgcccgctgctctgcgctggtggtcacagctgaggagaacatctgctgcgaggagctc
tgtgcaaagatgacagctgcaatagacagagacaccctaatggttccttcaacattaaat
gctgttgccactttcctccaagtcatggtcgagtgtgtggacttctcgccgtacactcct
cagtttcagcaaaagctgaagtctcctcacactccagtaaactggatgagaaagaggaat
aaggtcctggggaatctgtccaccttccagtccctgctggttcaatgtctagaggtgtat
ctggagggcactgaggcttcctctgaagccacaggattggccctggtctccgttctgtct
gctctcttcaccaacctcgttctcgccaacactgtcaaggaagccctgacttctctgatt
caacctctcaccctattttacaaacaagcagccagtgagccgcccaaattcacctcgcag
cttctgggaaagttggagaagcttctctgtgaggttctcggctgtctgcaggcccgttct
actttggcgtacaatgatgaactcctggctctgctgtctcctctactttgtgtgttgttt
cctcacaagaacaagcagatccgcacctcagtcgttcagttctggaactcagccttcgcc
aactcagtcagcctcacttaccccgatgagatcaggccaatattgagccaagtgaagcag
aagaccccaatcattcttcctggctttgaggttgtgagtgttcctgatgagctcagtgga
cagtattcaagtgagaattcccagttggagaccaagctgagtgggatgccagtttcatct
gtggggaagagggactcactgctgggaaaggctgctgagctgaaggacagaagctccacg
aagacctccaagccagtttctacaaaactggactttggctctcccaagcctcctcgcaga
gacgttttggaggaagaggcctcaatcgactttgtcttcattcctcctgagacgaaggag
cgagttctgacggagcaccagaaggaggtgaaaaggactaaaagggttgacatccctgcc
atgtacaacaaccttgatgcttctctggatacaacggttttcacccagtacacacagagc
caagaagactctctggacaaacagccaactgaacaaactgaagaggttaccaaagagact
cctggcaaggttctccaggaagatgtggaaaatgaggaagacattgaagttctaacagag
actcaagactatgccagcccaaaagcagtagataacatgacagaaaaccacgagcaggaa
gagatgatccctgagtcagcagatgtttctatggaggtttctatggataccaagagtggt
gatagagcagaagacttggatatgcagtctaaagaaggcacaagtcctaacatatctagc
tcttcagatttggtctcagggactccccagaaacccaacagtcgccgtcagtcctttatc
actctggagaagtatgctgagggaaagcctgccagccccagcagtgcgtccactttcaca
ggtcccctcataaagacctccagaagccaagaacgctcaaacaccaacaagacatcgtcc
tctcaggattcccagtctactcaggcaggaaaaattaacatgcagtgtcctgtgaacgat
gccccagagtctcctcgaaggccaaaagattctgggacgaaatgtgagccagtaaggctg
actgagagattgcccagtgatacaacagaggacgaagatgttatcccagacacccaggct
gaagtggagggcaaggagagtacaaaaatagcttctgcattagaggaaatgaaaccctca
agccaggaagaggaatctgagccgactctggatgattctcaatcctctgtgacccagact
actccaggcgaacccaggcggtctggacgctacagagtcagacctctgctgcctggagag
gaccctgaggagcgggaagataaatacacgttgttcaaaaggagacgttctggagaagaa
cctaaaagtgattccccaaagttaagctcaatgcaaagcagaccaaacacgagaagtaag
caaggtgctgaggaggacaacggcagagacagattacgaacaagggctcagagagacaag
agtgagtcaagccaaaccaactctcagggtagatcacacaagatcaaactgtacaacaat
tcggaggagttcctttataaacctgaacccagaaggagaagcaccagagagcatgagtcc
agccaaactgatttgcggtcggacacacagtctgattacgaaatgcagtcacagggtagg
cccagtcggcggagcaaatcatccctggagaccaaggaggagggtggaatgaagaaaaag
gttttgcctgacaaaaaagagtccagccaaactgccacacatgagcatgagcttgtagag
caggtcgaaaaggataagccaaagagagattctcaaatgatcactccttcctctcaaact
ggaggcaaatcccaagaggttgagcttgtagaacaaaccgaaaaagatggtggtaagcta
aaagattctcaaatgatcactccttcccctcaaactggtggcaaatcccaaaagtttgag
cttgtagaacagaccgaaaaagatggtgataagccaaagaaagattctcagatgaccact
ccttcccctcaaactggtggcaaatcccaaaagtttgagcttgtagaacagaccgaaaaa
gatggtgataagccaaagaaagattctcagatgaccactccttcccctcaatctggtggc
aaatcccaagagtttgagttcattgaaaaaaaggccaaaagggaaaagagagattctcag
atagttgcttcttcaactaatgaccagtcccaagatagaaaaagcacaacaaacaagttg
ctgaatgaatcagaggtcaaagacgaactcaagacaagagaaggtacagatgacaacctt
agtcaagaggactctcaagtgatcacaccctcatcttctgatagccagtctctgcgtaga
tccagaagaagcaaggcatcatctgagtctgaagagaaaagtgaaaataaggattcatta
ggaaggcagagtaggtccaattctcaggcagcattgtcagctgtcggtcaggcagaggcc
agaattggaggtaggaccagaaggagcaaggtacaagaggagcagtccaagtcgagtcct
agctcaaccccagagagttctcagtcattagatattgcaggatcaacagagtcctctcaa
ggcaggggcagatactcaagacgaagaaattctcaagcattagtggccaatatagagtcc
tcagagtctgaatcctccgaggccagagaaaattcccctatgcccaaaaagagagggagg
aaaccgcgagcgtctcttcaaagtcctctcacccttgaatctaaagaagacaaaattaat
aatgatatgggaatggattgttctgatacttctcaaaaggcagatacacaaagcatagaa
gctaaaaaaacagatttagaggattcaccaaaaaccccagatttgcagggttctgaatcg
ctccaggttacacataacattgaggagccaagtaacgaagaatcaccaatggaggtagaa
gttgatactgttgtaccgaaaactgaggccgacaacacaaagagcaaatcgctcagtgtg
tctcctcgcaaggaggagcaaagacaaaaggactctgaaacaaaccttgataattcctct
tcgcaagaaagtgacactggggactttcaatctgctgaaatgcttgaatcagttgggatc
agtactgaacagactcaggaaaaggtgccctgtgacccgtctgtgacatctgctgtggaa
gcactggccccctctaatgagacaacagagaaactgcaggcttcagagtcttcagagaag
gaagatgaacaagtgtctgagcctgttgtcaatgttacagaaaaccaaaatgatgattca
cattcaaaccagcaagaacatccagttgttccagtggaggatgcagttgatgacagtcac
agcacctcttttggacaaaaccaaatggcgtgtcaagatgtcatagaggatttttcaaag
gaagaggaagagtctgcctctatcaaagaaggcaaatcaacaaaccagcccacagagacc
agtgccggtgatgacatcacacctctacaggagagcgataaagacagcaaaacccagagt
atggagtgtcaggatgaagaggaaactcagaccaccaatgctgagaacgatgtagctgca
aatttggatgctgctctggctggtgtttgcaacacttcagtgttatcagaatctacaagc
aaagaggcttttccggattctccggcaaagcagaaggacctggaggctgtaatgggggca
gatgtcgtccaaagccccagcagtggcaggaccagaggaacctggtctccttcagcctcc
ccatcaaccagtattcttaagaagggccagaagagaccactagaggatgagaccccctca
cctcttgtcaaatccaggcgtgtgtcttttgctgatccaatccaacatcaggaaatagca
gacgacattgatcgtcgcagccctgctatcagaaccagctcccccagaagatccaaagtt
agcggtatcccacagcctaagtatgtcactactccaacaaagggcttgctggtcttaagt
cccagaaatctgcacagtccaggttacaagagctccaagaaatgcctgatttctgaaatg
agcaaagaaccgcggcctgtctccagagactgtatctaccccgccctggttggctgctct
acacctgtagaagctgtgctgcctcagatatcctccaacatgtggtctcgtggctttggg
cagcttgttcgagccagaaacatcaaaacagtcggtgacctcagtgctcttactcccagt
gaaatcaagactctgccaattcgctccccaaagatctccaatgtcaaaaaggcacttaaa
atctatgaacaacagcgtaaaggacgaggcggtgacgagttgaagagctttgatgaaatg
gagatgatgacttctgaactggaggagaccagtgctcctcaaaaccaggatgaggaggat
aagacctcagtagagacactagcaacagagctggtggacgagcttgtttctgcagatggg
aggccagagcaagaaggctccgggaatcagacaactgacgcgccggccgggcaacagaga
cctgaggaacaccctgaagggctgctgtcagaggtggaggccctgacctgcaggatgact
ccactagaactcggttactgctcaccacagcagctcgttcagatgcacgatcagttagga
ggcatgatgaggtgtgtggtagtcgagctgcagacgcgcctctgccagacagatggcaaa
ccctga

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