Siniperca chuatsi (mandarin fish): 122885108
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Entry
122885108 CDS
T08948
Name
(RefSeq) TBC1 domain family member 8 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122885108
Membrane trafficking [BR:
schu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122885108
Endosome - Golgi transport
Rab GTPases and associated proteins
122885108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
EF-hand_1
Motif
Other DBs
NCBI-GeneID:
122885108
NCBI-ProteinID:
XP_044071733
LinkDB
All DBs
Position
LG12:complement(22921814..22948714)
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AA seq
1135 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTERSNDFFLLQRRRGHGEQTGRFTGLLVGALDTVLDSNARVT
PFRILLQFPGCQISWVIASGAAIEEVNKHWDWLVHNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVRGRQAAQEEEPEKFREALLKFELHFGLPSSEKLVTYYSCCCWKGRVPRQGFLYL
SINHMAFYSFLLGKEVKFVIPWAEVTRLERVSTGLMTEAIRVNTRQRQREFSMFLNLDEA
FGVIGQLADIALRRLLDSEGLELDRVLQQPTRISKRILEEQALREYVLALFRLPRGERLH
EVASCSIWTPHARCHTAGTLYTTDSYLCFSSREEGSCILLLPLSEVLSIEKAESTSLLPN
PVIVSVRTKKAFQLIELQDRNELVESLNCRLRALQWKQSMFRSRKDSKRSVSSPTPYYTF
YYDTGLPDEEEIEEQVLRNTVNSEALMTAFHQNQPGTNSNKSMEQEKERLWEDHFSEFGR
GVHMFRTDKIQKLVAMGIPESLRGELWMTLSDASSELESHQGYYTSLVQKSMGQSNLATE
EIERDLHRSLPDHPAFQNPTGIAALRRVLTAYAHRNPKIGYCQSMNILSSVLLLYAKEEE
AFWLLVAVCERMLPDYFNRRVIGAQVDQSVFEELIRERLPELAEHVPDLSALSSVSLSWF
LTLFLSVLPFHSAVCVVDCFFFHGIKAIFQLGLAALEANAPQLSSSTDDGQALMILTSFL
DQVGSEESSCLPSSPPAAEETDIPAVGHTNITDLINESYEKFGDLTVRQIERLRCRHRIL
VLQAHEDITKENTTSISSLCVSVQLRLVTQDVSISPENLADVYDLFKTEHFISLYWGDSS
SAAAAAEAAAWRYGDSGHSYIERQYRLDRPQFKSLYGLLAPWPGSSNQHADTMANRTFTL
LDQDRDNLVTFREFAGWLDTLYCEELNEKIRLLYRLHIPPALTESEDDPSLIRSPLLSTN
RPLYVNLPSGVDEVQDYQEQLKQMLQDLAKEKEKDVEKPLPLMNQREFIQFCKTLYSMFH
GYPEENDLFQAIATVTSLVLQIGEAGHCGHTSGSEVTSQEEAKGAGQVTAEDAGSSAAEK
EWTVSYAQILASLLTEQALVNFFEKPVDLSAKISEAREKQYHQRAGLLTLQQGTS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaacccggaggaagttctgctgaaaaacgctctgaagctctgggtgaccgag
aggagcaacgacttcttcctcctgcagaggaggagaggccacggagagcagacaggcagg
ttcacaggtctcctagtgggggcgctggacacagtgctggactccaatgccagggtcaca
cccttccgcatcctcctccagtttcccggctgccagatcagctgggtaatcgccagtgga
gctgccatagaggaggtgaacaagcactgggactggctggtccacaacctgcttcactct
ctgtctgtgtttgagaacaaggaggatgttgccagctttgtcaaaggaaaagtcaagggc
cttattgcagaggaggttcggggtcgccaggccgcccaggaggaggaaccggagaagttc
agggaggcgctgctgaagttcgagctgcactttggcctcccttcgtcagagaaactggtg
acgtactactcgtgctgctgctggaagggccgggtgcctcggcagggcttcctctacctc
agcatcaaccacatggccttctactccttcctgctggggaaggaagtcaagtttgtgatt
ccctgggcggaggtgacacggttggagcgggtctccaccggtctgatgacagaggctatc
cgggtcaacacacggcagcggcagagggaattttccatgttcctgaacctggacgaggca
ttcggggtcataggtcagctggctgacattgccctcaggcggctgctggacagcgaaggc
ctggagctggaccgagtcctgcagcagcccacacgcatcagcaagaggatcctagaggag
caagcattaagggagtacgtcctggctctgtttcggctccctcgtggtgaaagactccat
gaggtggcctcctgttcgatatggacaccacatgcacgctgccacacagccgggactctc
tacaccactgacagttatctgtgtttctccagccgagaggaaggcagctgcatcctgctc
ttacccctctcagaggtgctgtccatagaaaaagcggagagcaccagtctgcttcccaac
cccgtcatagtgagtgttcggactaagaaggctttccagctgatcgagctgcaggacaga
aacgagctggtcgagagcctgaactgcagactccgagctctgcagtggaaacagtccatg
ttccgcagcaggaaagacagcaagagaagtgtgagctccccgacaccctattataccttc
tactatgacaccgggctccccgatgaagaagagatagaggagcaggttctgcgtaacacc
gtcaacagtgaggctctgatgacagccttccaccaaaaccaaccaggaaccaacagcaac
aagagcatggagcaggagaaggagcggctgtgggaggatcatttctctgagttcggtcgt
ggcgtccacatgttccgcacagacaagatccaaaaacttgttgccatggggataccagag
tctctgcgaggggagctgtggatgacactttctgatgcgtcctcggagctggagtcccat
cagggctattacaccagcctggtgcagaagtcgatgggccagagcaacctggccacagag
gagattgagcgggacctgcaccgttctctgccggaccatcccgcctttcaaaaccccacc
ggcatcgctgcactgagacgtgtcctcaccgcttatgctcaccgcaaccccaagatcgga
tactgtcagtctatgaacatcctgtcgtcggtgctgctgctctatgccaaagaagaagaa
gctttctggctgctggtggctgtttgtgagaggatgctgcctgactacttcaaccgcagg
gtcataggagctcaggtggaccagtcagtgtttgaggagctgatcagggagcgtttgcca
gagctggccgaacacgttccagacctctccgccctctcctcagtctccctctcttggttc
ctcaccctcttcctcagcgtcctgccgttccacagcgccgtctgcgtggtcgactgtttc
ttcttccatggaatcaaagccatcttccagttgggtttggcagcgctggaggccaatgct
ccacagctctcttccagcacagatgatggacaggcacttatgattctcacaagttttctg
gaccaggttggaagtgaagagtcgtcttgtcttccgtcctcgccgcctgctgcagaggag
actgatattcccgctgtgggacacacaaacatcactgacctcatcaacgagtcgtacgag
aaattcggagacctgacggtgaggcagattgagaggcttcgctgtcgacacagaatccta
gtgctgcaggctcacgaagacatcaccaaagaaaacactacctccatctcttccctctgt
gtgtctgtccagttgagactggtgactcaagatgtctccatctctccagagaacttggct
gatgtctacgacctgttcaagacggagcacttcatcagtctgtactggggagacagtagc
tctgcagcagcagcggcggaggcggcagcatggcgttacggtgactctggtcactcctac
atagagaggcagtaccggctggacaggccccagttcaagagcctgtatgggctgctggcg
ccgtggcccggcagctcgaaccagcacgccgacacgatggccaaccgcaccttcacccta
ctggaccaggaccgcgataacctggtcacctttagagagtttgccggctggctggacact
ttgtactgtgaagagctgaatgagaaaataaggctgctgtaccgtctgcacatcccacca
gctctcacagaaagtgaggatgatccctctctgataaggagccccctgctgtccacaaac
agacccctctatgttaatctgccctctggtgttgatgaagtgcaagattaccaggagcag
ctgaagcagatgctgcaggatctggccaaagagaaggagaaagatgtggagaagcctctg
ccactcatgaaccagcgcgagttcatccagttctgtaaaacgctctacagcatgttccac
ggctacccagaggagaacgacctcttccaggccatcgctacggtaacaagtcttgtgctg
cagatcggcgaggctggccactgtggacacacctcggggtcagaggtcaccagccaagag
gaggcaaaaggagcgggacaggtgactgctgaagatgctgggagttcggcggcagagaaa
gagtggacagtcagctacgctcagatcctggcctcgctgctgaccgaacaggcgctggtg
aacttctttgagaagccggtggatctgtctgcaaaaatctcagaggccagggagaagcag
tatcaccaacgggcaggtttgctcacactgcagcaagggaccagctga
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