Siniperca chuatsi (mandarin fish): 122885214
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Entry
122885214 CDS
T08948
Symbol
col28a2a
Name
(RefSeq) collagen, type XXVIII, alpha 2a isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122885214 (col28a2a)
Peptidases and inhibitors [BR:
schu01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
122885214 (col28a2a)
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_CoxE
DUF1645
Motif
Other DBs
NCBI-GeneID:
122885214
NCBI-ProteinID:
XP_044071926
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Position
LG12:14454110..14471441
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AA seq
1243 aa
AA seq
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MFPSFTSVLLVTALTSVWAQDFYEERKINKKSRAKPLAANIHDGQAILDEDCSLELSFLL
DSSESAKDNHEQEKQFAMNMVDRLQGVRLQTGRSLSLRVALLQYSSHVITEQTFRDWRGT
ENFKTHIAPIIYIGHGTYTTYAITNMTKIYLEESSHGTIKVAVLLTDGISHPRNPDIFSA
VANAKNQGIKFFTLGITWAANEPANVAQLRLLASSPASRFLHNLQDKDIVEKIVTEITSL
ADEGCPLAQRCACEKGEMGPSGPAGKKGRPGEDGAPGLKGHKGEAGLSGLPGREGAEGKP
GYKGEKGERGECGTPGIKGDRGPEGSVGTRGLRGLQGLPGPHGDIGPEGPQGKQGERGSV
GPPGIQGETGIGLPGPKGDMGFQGRPGPPGPLGVGEPGLPGPQGPQGVQGEKGPQGEGFP
GPKGDRGLPGPSGPRGQQGAGIKGERGELGPPGLPGLTGLTGVGIQGEKGIEGPRGPPGV
RGLPGEGLPGSKGDQGLPGEQGAPGERGIGEPGPKGEPGSAGLSGLHGLPGEDGAPGQKG
EPGLPGLRGPDGAQGIGTQGEKGDQGLRGIRGLHGPPGISGPSGPKGERGIPGQQGLPGL
PGRSISGPKGDVGPPGPSGPIGETGHGLPGPKGDRGHLGLPGPVGPKGEGSSGPMGPPGM
PGLPGEPGLEGIGIPGPKGDIGFRGLPGLPGPSGEGLQGPPGNVGRSGPPGPTGPPGEGI
QGPKGEPGSQGMTGPRGPQGDGFPGAKGDRGLQGERGMKGTKGDLGDPGVPGEGGRPGAK
GEPGLTREDIIKLIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIKDFVTRLVDRT
TVGRNATRIGLVLYSLDVHLEFNLARHMSKQDVKQAIRKMPYMGEGTYTGTAIRKATQEA
FFSARPGVRKVAIVITDGQTDKREPVKLDIAVREAHAANIEMYALGIVNSSDPTQAEFLR
ELNLIASDPDSEHMYRIDDFNTLPALESKLVSQFCEDENGALIYNHITNGHWNGNNGHGH
GINGNNRHGENTNGYYGYGNNGYAYENHGYGNNGNGYNYQDKIQNQRRTNSRGRGDTFTL
PISADPLPVQVVEDDDGEDLDLRAHVRGGNTVAAVNKTTSLSPVREKSSVSSEAVISSSS
SSSTSSSSSATSSSTLGSASSLNSNQLQPVVSPVLPEEAPLRDPRCNLSLEQGTCRNYSI
RWYYDKQANACAQFWYGGCGGNDNRYETEDECKKTCVIFRTAG
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgttcccctcctttacgtctgtgctgctggtcacagcactgaccagtgtctgggcccaa
gacttttatgaagagaggaaaattaacaagaaatccagggccaaaccgctggctgcaaat
attcatgatggacaagccattctagatgaggactgcagcttggagctctccttcctgttg
gacagctctgagagtgccaaggacaatcatgagcaggaaaagcagtttgctatgaacatg
gtggacagactccaaggggtaaggctgcagaccggccgcagcttgagcttgagggtggct
ctgctgcagtacagcagtcatgttatcacagagcaaaccttcagagactggaggggcaca
gagaacttcaagacccatatagctcccatcatctacatcgggcacggcacctacaccacc
tacgccatcaccaatatgaccaagatctacctggaggaatccagccatggtaccataaaa
gtagccgtgctgcttacagatggcatttcacacccgagaaaccctgacattttctctgct
gttgctaatgccaagaaccagggcatcaaattcttcactttgggcatcacctgggcagcc
aacgagccagccaatgtagcccaactccgtctactagccagctccccggcctcccgcttc
ctccataatttacaagacaaagacattgttgaaaaaatcgtcactgagattaccagcttg
gctgatgaagggtgccctctggctcagagatgtgcttgtgagaaaggagagatggggcca
agcgggcctgcggggaaaaaaggtcgccccggagaagatggagccccagggcttaaaggg
cacaagggtgaagcaggactaagtggtctacccgggcgagagggtgctgagggaaaacca
ggttacaaaggagagaagggtgagaggggtgagtgtggcactccgggaatcaaaggagac
cggggtcctgagggttcagttggaacaagaggacttagaggtctgcaggggttaccagga
ccacatggagacattggaccagagggccctcagggaaagcagggtgaacgtggctcagtt
ggccctccagggattcagggggaaactggtattggacttcctggaccaaaaggtgacatg
ggattccagggccgaccaggtcctcctggtcctcttggagtgggggaacccggccttcct
ggacctcaaggaccacaaggtgttcaaggggaaaaaggaccccaaggcgaggggtttccc
ggaccaaagggggatcgggggctccctggaccgagcgggccaaggggacagcagggtgca
ggaatcaaaggagaaaggggtgaattggggcctccaggtcttccggggctaactggactg
acaggagtgggcatacagggagagaagggaatcgagggtccaagaggtccaccaggagtc
agaggacttccaggagagggtttacctggatctaagggagaccaaggtttacccggagag
cagggagctccaggagagagaggcattggtgagcctggtccaaagggagaaccaggatca
gctggtttgagtggcctgcatggtcttccaggagaggatggagctccaggacagaagggg
gagcctggtttacctggtttaagaggtcctgatggagcacagggaattggcactcaaggg
gagaagggtgaccagggtctgaggggcatccgtgggttacatgggcctcctgggatctca
ggaccctctgggccaaagggtgaacgtgggataccaggccagcagggcttgccagggctg
ccgggacggtccatatcaggtccaaagggtgatgtaggccctcctggtccctctggtcct
attggggaaacaggccatggattacctggtccaaagggtgatcgtggtcatctgggttta
ccaggtccagttggtccaaaaggcgaaggtagctccggccctatgggtcctccaggcatg
ccaggcttaccgggcgagccgggcctagaaggaataggaattcctggtcctaagggtgac
attggctttagaggattgccaggtttgcctggcccatctggagagggtttacaaggacca
cctggtaatgttgggaggtcaggacctcctggtccaactggacctccgggagagggcatt
caaggcccaaagggtgagccaggatctcaaggtatgactgggcctagagggcctcaagga
gatggatttcctggagctaagggtgatcgtggattacagggtgagaggggaatgaaaggt
acaaaaggagacttgggagatcccggagtccctggtgaaggggggaggccaggagcaaaa
ggagaaccaggcctcacaagagaagacattattaagctgatcaaagaaatctgcggatgt
ggcatcaagtgcaaagaaagaccaatggaacttgtgttcgtcattgacagctcagagagc
gtcggccccgagaactttgaaatcatcaaggactttgtcaccaggttggtggaccggacc
acagttggacgcaacgccaccagaatcggactggtcctctacagtctggatgtccatttg
gagttcaacttggctcgccacatgagcaaacaggacgttaagcaggcaatcagaaaaatg
ccttacatgggtgagggcacctacactggtactgccatcagaaaggcgactcaggaggct
ttcttcagtgctcggcctggagtcagaaaagtagccatcgtcatcaccgacggtcaaact
gacaaacgagagcctgtcaaacttgacatagccgtgagggaggctcatgctgcaaacatc
gagatgtacgccctggggattgtcaattcttctgatcctacgcaggctgagttcctgcga
gagctcaacctcattgcctctgaccccgacagtgaacacatgtaccgtattgatgacttc
aatactctaccagcactggagtcaaaacttgtcagccagttctgtgaagatgaaaatggc
gcccttatttacaatcacattacaaatggacactggaacggcaacaatgggcatgggcat
ggtattaatggaaacaatagacatggagagaacaccaatggatattatggctatggcaat
aatggttatgcttatgaaaaccatggatatgggaacaacgggaatggttacaattaccaa
gataaaatccaaaatcaaagacgcaccaacagccgaggccgaggagacactttcacgctg
cccatcagtgctgatcctctccctgttcaggtggtggaagatgatgatggtgaagattta
gacctgagagcccatgtgcggggcggcaatactgtagctgcagttaacaaaacaacatct
ttatcgcctgtgagagaaaaaagctccgtctccagtgaggcagtcatatcatcatcttca
tcgtcgtccacgtcttcatcctcatctgcaacatcttcgtcgacactgggctcagcttca
tcattaaactcaaatcagttgcagcccgtggtgagtccagtcctgcctgaagaggcccct
cttcgtgatccccgctgtaacctcagcttggaacaaggcacctgccgaaactatagcatc
cgctggtattatgacaagcaggctaatgcctgtgcacagttttggtatggaggctgtggt
ggaaatgacaaccgttatgaaacagaagatgaatgcaagaagacttgtgttatattcaga
acagcaggataa
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