Siniperca chuatsi (mandarin fish): 122885261
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Entry
122885261 CDS
T08948
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122885261
04091 Lectins [BR:
schu04091
]
122885261
Ion channels [BR:
schu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122885261
Lectins [BR:
schu04091
]
C-Type lectins
Others
122885261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
Lectin_C
SUEL_Lectin
GPS
COLFI
Motif
Other DBs
NCBI-GeneID:
122885261
NCBI-ProteinID:
XP_044072039
LinkDB
All DBs
Position
LG12:7219320..7262987
Genome browser
AA seq
2612 aa
AA seq
DB search
MRLTFELKTERMCRTIVHLLILTSLDCLSRAEDKTKITVSCPEHQKAFRGSCYEFVGLHR
TSFSAQAWCEQRGGHLAFIPDEETQHFLQRHLDSKKDVWLGVGPSAVPNLQYSATVEGLL
SWLDGSQIIYSNWVSSPQPGAACGHILRDSGFQWKATRDCNKKLHFICQFESGRSTVCAG
RNTTLQCGSGQVLMIDSGFYGRKNIHYCRSTLSPPTTPTRHQYGWVDVVESLTAHCHGHQ
VCQIAEVMDSFGEPCPQLGSYLSLDYHCKDGLTLSVTTVAAVLNDVTISVKWLLPLPQEN
LSCKLSTGDGHVIYLHSPEGLESSVIHKYTHPSTFLVAAECTSSDIQITAQKIITIQELI
TEFGVIRCHAGNLSFHAANCKALYGQPFQTQVEVKAGTNVTYRIQSADMLLSCLSVVRGN
VPQNITVTLELVKQLGPGCHQLTLYASNMVTFPEVSADLQMCVLEKVAGLQASVLTERDD
CLESPDITIGVSLERGAPVLLLFSLTGDNSSFSETREMNTRKEIFHIGHPIQGSVQVKLR
AWNVFSSLKVDVDMLASCGKDSLVELNGHNDYLLSFNKRPRKKHIRVIRSPMTIIAKPSD
SVPSKNQSIMLSIKDPSKLTDQDMQYQWTCKSPCRCQGDFKGLTYIITENCLPDPFQFYK
YHFNMIDKGGDVKKTESICITLTPAQTKIPTWLSLTCTEGCNPVKANIDAKIKMDCKGHA
CPQVTWNIEYPGNEKDWPAETKDCYKKANQRPLMNIKTGGTEFTVTHTSLEQAKSKGQDV
TVVITSADIIPLYKEYTIETSSSSIKPARTTKNPAATVTKAEAGDTEGKTTTVAGPATTS
PGTISATTFTSTTTILTTAVISTIAAITATTAITTFTATTAIPTTAAITTITATTSDTSS
SATANNFDTLKCSISPSSGTTLDAFKITCNTEIPCSTCQYCFKTQEGKHLLCSKNNEVKS
LFLPLGDSSSNYNMIIKATAKNSSFVESTTITVQVLDSTAASSSSVDDLKASVENAVAQL
KKDGLLSGSNVGQIFNSVSNILNGLSDTSKKAEKQKLREQMLDIMIDTVKEIPTNTPEEV
QVIARGLTAVVQKGTELSSSAQEEASLLFANLSTSLLHMNVNKSEENKKEIHFAASTIVE
GASNILDYSSNKTISDALLVALTNTQSALLTFKDVNEGPSIIQQAHIGVFVKRVTPGSLH
TESINIPNCSCPTFSLPLLPSNTFPSDEPVDIRMLSFDKNPFSWNKRGDISGLIGALSLT
TKDGIGIPVENLSEDIEILLPRPVDEQVNTSVLDLGNYSTMVIDIRSADTTLVLKMVPSN
DPLPFKLFLGHMNYPTETNYIAMTEMPHLGTTQEERYTWLLDPTNLKGNTGVHYLVVRPI
VGPGIKSINANLSITSITTSCKFWDESILDWNNIGCRVGVQTTPLVTQCLCNHLTFFGSS
FFVTPNLVDPSRTAELFGTFTENPVVVCFVGALFVAYLLVVVWARRKDIQDATKVKVTVL
EDNDPMDEYRYLLSVSTGHRRGASTSSQVIITLLGTEGNGEPHHLTDPKKCVFERGAVDM
FLITTPFSLGDLQGIRLWHNNSGSHPAWYVGNVMVQDLQTEQKWHFLCNSWLAIDMGDCS
LDKVFPISTEKDLMRFSNLFFMKTTKDFSDGHLWYSVISRPPSSTFTCVQRVSCCFSLLL
CTMLTSIMFYGIPADPSEQTMDLGHFEFTWQQFMIGVQSSLIMFPVNILIVSVFRNTRPR
KTSCCKRKIEKPDTLEKISFSQTATTNMNVNVTLDTVIKDITRIAHSLSKTVKSNIPCTE
SEFEPGQQVDINAVLSVVEDFIKQNNKTSDTAQSKNQSFHNLAQPQLPESSASTHPRSTV
EGIQKKSNKTHYLYTQLCHIDKELSLLGPSGFPTPHGYSQALQQVQGMKGFLEDQLFKFS
CVNLDELTQKKLSPADSSDGDGSQKKKLCCHGGLPWWFIFVGWLLVIATSVVAGYFTMLY
GLKFGKERSVSWLVSMIVSFFQSILIIQPLKVLCLAVFFALVIKKVDEEDFQNLAFVRND
RNQGDCKDQQTIGRDSSLYEPPPPADIEKMKRNKIMEQKAFALLREILTYMGFLWMLLLV
AYGQRDPNAFFLNQHIRDSFSGEISDSMSLADVFTWANTALLNNLFGVYPGFITDGNSKL
VGNARLRQLRVQKNSCQIAGSMLQFVPDCHAPYSWEVEDMGSYDPGWNQSVRDNISTSTP
SPWKYQTQAQLRAYPVWGKMVLYRGGGFVSELGPDLQNASNTIEYLFRNKWLDMYTRAIL
VEFTVYNANVNLFCIVTLLLETTAVGAFQFHSELRSVRLYPLTGGLHIFVMAAEVIYLLF
ILYYMFLQGKLMKQQRWAYFRSKWNLLELTIILLSWSTMAVLINRTLLGNRDMTYYQNHK
DQFASFYETATADLVLQYLIAFLVLLATIKLWHLLRLNPKMNLITAALQRAWSDISGFLI
IIVIMFVAYSMACNVIYGWKMSSYRTLADALLTIISLQIGIFNYDEVLDCNPFLGALLFG
SCVVFITFVVLNLFISVILVAFSQEQIYHKPSEEEEIVDLMLKKICSLCGIRYNNTKDTL
GPDANEGSGLTLNNSKNILNNSSIDVKKNSDI
NT seq
7839 nt
NT seq
+upstream
nt +downstream
nt
atgagactaacttttgaactaaaaacagaaagaatgtgccggacaattgtgcacctgctg
atcctgacgtcactcgactgtctgtctcgtgctgaagacaagacgaagattacagtttcc
tgtccagaacaccagaaggcctttagaggctcctgctatgagtttgtgggtctccaccgt
acttcttttagcgcccaggcttggtgtgagcagcgtggtggacaccttgcatttatccca
gatgaagaaactcagcatttccttcaaagacacttggacagcaagaaggacgtgtggctt
ggagtaggaccttctgccgttccaaacctgcaatattctgccactgttgaaggtctcctc
tcttggctggatggttcacaaatcatctattcaaactgggtgagcagcccacagccagga
gcagcttgtggacacatactgagagactctggcttccaatggaaagccacaagagactgc
aacaaaaaactgcattttatctgccagttcgagtctgggagatccactgtgtgtgcaggt
cgtaacaccactctgcagtgtggttctggtcaagtcttaatgatagatagcggcttctac
ggtcgtaagaacattcattactgtcgatctactctctccccaccaacaacacccacacga
catcagtacggctgggtggatgttgtagaatcattaacagctcactgccatggccatcag
gtctgccagattgctgaagttatggactcctttggtgaaccctgtcctcagctggggagc
tacctgtctttggactaccactgcaaagatgggctcacactgtcagtgaccactgtggct
gctgttttgaatgacgtcaccattagcgtgaagtggctcttacccttgccccaggaaaat
cttagctgcaagctgagtaccggagatggccatgttatttatctgcacagtccagagggg
ttggagagcagtgtgatacacaaatatactcatccaagtacatttcttgtggcagctgaa
tgcaccagcagtgacatacagattacggctcagaaaataattaccattcaagagctcatc
acagagttcggtgtcatcaggtgccatgcagggaatctgtcttttcatgcagccaactgc
aaagccctttacggacagccatttcaaacacaggtggaagtaaaagcaggtacaaatgtg
acctacagaatccagagtgctgatatgttgttgtcctgtttatctgtggtcagaggaaat
gttccccagaacatcacagtgactctagaactggtgaagcagcttgggcctggctgccac
cagctgaccctttatgcatctaacatggtcacgttccctgaagtgtccgcagacctgcag
atgtgtgtgttggagaaagtagccgggcttcaggcctctgtgttgacagagagggatgac
tgtctagaatctcctgatattaccattggtgtttccctcgaacggggagcacctgtgctg
ctcctcttctctctgactggagacaacagctcattctctgagaccagagaaatgaataca
agaaaggaaatttttcacattggacacccgattcaaggatctgtacaagtgaaactcaga
gcatggaacgtcttctcttctttgaaagtggatgtggatatgcttgcttcctgtggcaag
gattcacttgttgaactaaatggtcataatgactatttgttaagctttaacaagagaccg
agaaaaaaacacattagagtgatcagatctccaatgacaatcattgcaaaaccttcagat
tcagtaccttccaaaaatcaaagcatcatgctttcaataaaggacccgtccaaactaact
gaccaggacatgcaataccagtggacatgcaaaagcccctgtcgttgccaaggagatttc
aagggactaacttacatcattacagaaaattgcctaccagatccatttcagttttataaa
tatcattttaatatgattgacaaaggtggtgacgtgaagaaaactgaatccatatgcatc
acccttaccccagctcagactaaaattccaacttggctaagtctcacttgcactgaaggc
tgtaacccagtaaaggcgaacattgatgcaaaaattaaaatggattgtaaaggacatgca
tgcccacaagttacgtggaacattgagtacccaggaaacgagaaggactggccagctgag
actaaggattgctacaaaaaagcaaatcaaaggccacttatgaacataaagactggtggg
acggaattcactgtgactcacaccagtcttgaacaggccaagtctaaaggtcaggatgtc
actgtggtgataacttctgcagatatcatacctctttacaaagaatacaccatagagaca
tcatcatcttcaataaaaccagctcgtaccaccaaaaacccagctgccactgttacgaaa
gcagaagctggagacactgaaggaaaaacaacaaccgttgctggtcctgccactacatca
cctggcactattagtgccaccactttcacctctaccaccactatccttactacagccgtt
atctctactattgccgctatcaccgctaccacagctatcaccactttcactgctaccacc
gctatccctacaacagccgctatcactactatcactgctaccaccagtgatacatcttca
tcagcaaccgccaacaattttgatacccttaagtgtagcatatcgccatccagtggaaca
acccttgatgctttcaaaataacttgcaatactgaaattccttgttctacctgtcagtat
tgttttaagactcaggagggtaagcatctgctttgcagtaagaacaatgaagtgaagtct
cttttccttcctcttggagacagcagttccaactacaatatgattatcaaagcaactgca
aaaaatagcagctttgtagaaagcaccaccataactgtacaggtgctggattccacagcg
gcctccagctcttcagtagatgatcttaaggcgtcagtggagaatgctgtggctcagcta
aagaaagacggtctactgtcaggatcaaatgtgggacaaatcttcaattctgtgtctaat
atactgaacggtctatctgatacatcaaaaaaagctgaaaagcaaaagcttcgtgagcag
atgctggacataatgattgacacagtaaaagaaattcccaccaacactccagaggaagtt
caggtgatagctcgaggacttactgctgttgtccagaaaggcactgaactcagctcctct
gctcaggaagaggcttcattattgtttgcaaacctaagcacatccctcctccacatgaat
gtaaacaaaagtgaagaaaacaagaaagaaatacactttgcagcaagtaccattgtggaa
ggagcaagcaatatcctggactattcttccaataaaaccatctctgatgcccttctcgtt
gctctgactaacacacagagtgcattgttaacatttaaagatgttaacgaggggccatct
atcatccaacaagctcatattggtgtgtttgttaaaagagtgacaccgggaagtttgcac
acagagtccataaatattcccaactgttcctgccccacattttctctcccactgctaccc
tctaatacatttccttcagatgaaccagtggatatacgaatgctgagttttgataaaaac
ccattttcctggaataagagaggggacatcagtggcctaataggtgctctatccctcaca
acaaaagatggtatcggtatccctgtggagaacttgagtgaggatattgagattctgttg
ccaaggcctgttgatgagcaggtgaacacctctgttttggacctggggaactacagcaca
atggtcatagacattcgttcagctgacactacgctggtgttaaagatggtgccttcaaat
gaccctttacccttcaaactgttcctcggacatatgaactaccccactgaaacaaattat
atagcgatgacagagatgcctcacctgggaacaacacaagaggagagatacacttggcta
ctagaccctacgaatttaaagggaaacactggagtgcactatcttgtagtgaggcccatt
gtaggtccgggtataaaatccatcaatgccaatttatcaattacctccatcactacgtca
tgtaaattttgggatgaatcaatattggattggaacaatattggatgcagggttggtgtt
cagaccacacctttagtcacccagtgcctctgcaaccacctcaccttcttcgggagctct
ttctttgtcactcccaaccttgtcgacccgtcacgcactgctgagctgtttgggactttt
actgagaatcctgtggtcgtctgcttcgtgggggctctttttgtggcctatctcttggtg
gttgtgtgggctcgacgaaaagatattcaagacgcgaccaaggtgaaggtgactgtgctg
gaggacaacgaccccatggacgagtaccgctatctgttgagtgtcagcactgggcatcgg
agaggagcctccacttcttctcaggtgataataactctgctgggtacagagggaaacggt
gaaccacatcacctgacagatccaaagaaatgtgtgtttgagagaggtgcggtggatatg
ttcctgataactacgcccttctccctgggagacctgcagggcatcagactgtggcacaac
aactcagggagccatcctgcctggtatgtaggcaatgtcatggtgcaggatttacagacg
gagcagaaatggcattttctatgcaactcctggctggccatagacatgggcgactgttcc
ctcgataaagtttttcctatttcaacagagaaggatttgatgaggttcagtaatttgttc
ttcatgaagacaacaaaggatttcagtgacggacacctctggtactctgtgatcagtcga
ccaccgagcagcaccttcacttgtgttcagagagtttcctgctgtttttccctgctgctc
tgtaccatgctgactagcatcatgttttatggtatcccagcagatccctctgagcagacc
atggacctgggtcactttgagtttacctggcaacagttcatgattggagttcagagttcc
ctcatcatgtttcctgtgaatatccttattgttagtgtcttcagaaatactcgtccccgg
aagacgtcttgttgcaagcgcaaaatagaaaaaccagacacccttgaaaagatttctttc
tctcagactgcgaccaccaacatgaatgtcaatgtcactttagacactgtcataaaggat
atcacaagaattgcccattcactgtctaagactgtgaaaagcaacataccatgcacagag
tctgagtttgagcctggacaacaagttgatatcaatgctgtcctttctgtggtggaggac
ttcatcaaacagaataacaaaaccagtgacaccgcccagtccaaaaatcagagctttcac
aacctcgctcagcctcagctaccagagagcagtgctagtacgcatcccaggtcaacagtg
gaggggattcaaaagaagagcaacaaaacccactatctatacacgcagctgtgtcacatt
gacaaagagctgagtctgctgggaccctctggcttccccaccccacacggctacagccag
gctctgcagcaagtccagggcatgaagggttttcttgaagatcagctcttcaaattcagc
tgtgtcaacctagatgaacttacccagaagaagttgagccctgctgacagcagtgatggt
gatggtagtcagaagaaaaagctgtgctgtcatggagggctaccctggtggtttattttt
gttggctggctgctagtgatcgcaaccagtgttgtagcaggatatttcacaatgctatat
gggttgaaatttgggaaggaacgctccgtaagctggttggtatccatgatagtgtccttt
tttcagagtatcctcatcattcagccattgaaggtgctatgtcttgcagtcttctttgca
cttgtaataaagaaagttgatgaggaagattttcaaaatttagcatttgtaagaaatgac
agaaatcaaggtgattgtaaggaccaacaaacaatcggacgggatagcagtctctatgag
cctcctcctcctgcagacattgagaagatgaaaaggaacaagattatggaacagaaagcc
tttgccctcctcagggagattttgacctacatggggtttctgtggatgttgctgctggtg
gcgtacggccagagagatcccaatgcttttttcctgaaccaacacatccgggatagcttc
agtggagagatctcagacagcatgagtctcgcagatgtgttcacttgggccaacacagct
ctattaaataacctttttggagtttatccaggattcatcacagatggaaactccaagcta
gtgggtaatgcccgtcttcgtcaattgagagtgcagaagaactcctgtcagattgcaggc
tccatgctccagtttgtaccagactgtcacgctccatattcatgggaggtggaagacatg
ggctcctatgacccgggctggaaccaatctgtgagggataatatctcaacgagcaccccc
agcccgtggaagtaccagacgcaggctcagctcagggcgtaccctgtctggggcaaaatg
gtgctctacaggggaggtggctttgtatcggagctcggcccagatttacaaaacgccagc
aacaccattgagtatctgttcaggaacaaatggctggatatgtacacaagggcgatcctt
gtagagttcaccgtttacaatgctaatgtgaacctcttctgcatcgtcacactcttgttg
gagaccacagcagtaggagcatttcagttccacagtgagctgcgtagtgttcgtctttac
cctttaactggtggtcttcacatcttcgttatggccgctgaggtcatatacttgcttttc
atcctctattacatgttcctgcagggcaaattaatgaagcagcagcggtgggcttacttc
aggagcaagtggaaccttcttgagctgactatcatcttactgagctggagcaccatggct
gtcctcatcaacaggaccctgcttgggaaccgcgatatgacctactaccaaaaccacaaa
gaccaatttgccagtttttatgagacagccacagcagacttagtgctccagtatctgatt
gccttcctggtcctgctcgccaccatcaaactgtggcacctgctcagactgaaccccaag
atgaacttgatcactgctgcactgcaacgggcctggagtgacatatccggtttcctcata
atcattgtgatcatgttcgtggcgtattccatggcttgcaacgtgatttatggctggaag
atgtcctcttatagaaccttagcggatgctctcctgaccatcatcagtttgcagataggc
atctttaactatgacgaggtcttggactgcaaccccttccttggtgcattactttttggt
tcctgtgttgtgttcataacgtttgtggtgctcaatctcttcatctcagtgattctcgtg
gcattcagccaggagcaaatatatcacaagccctcagaagaggaggagattgtcgacctg
atgctgaagaagatctgcagtctttgtgggatcagatataacaatacaaaagacaccctg
gggcctgatgcgaatgagggcagtggcttgacccttaataacagcaaaaatatccttaac
aattcctcaattgatgtaaaaaaaaattcagacatctga
DBGET
integrated database retrieval system
