Siniperca chuatsi (mandarin fish): 122885292
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Entry
122885292 CDS
T08948
Symbol
tspearb
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
schu03037
]
122885292 (tspearb)
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122885292 (tspearb)
Cilium and associated proteins [BR:
schu03037
]
Other cilia and associated proteins
Stereociliary proteins
122885292 (tspearb)
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
122885292 (tspearb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
TS_C
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
122885292
NCBI-ProteinID:
XP_044072110
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All DBs
Position
LG12:complement(28947988..28981251)
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AA seq
667 aa
AA seq
DB search
MLACRSLLLTWVLLATRVQSQSWRPCTDLLPLDLLARALPHPGQAPPTQVQMVQSRGSRG
LRLAGAVATELSFPSSQVFTNCDYFPAEFSLVATIKIPRLRQKRNEYIFSVVEEGSDSLL
LGLCVSENRLHFLVTPPGVGGRSRLSFKDVGLDDNRWHTVVLAVTGPYAMLTIDCGLPLE
LKQVQSFPSILSTRGSKFFIGSRRRMRGRFSGLLRQLVLLPGSDARPRLCPTSDPSLAEL
SVPQVLKSTPLKPDHHGPVYPYEAEARVTLGNPPPCSGPEDGQLWFNAQRKDLLICDGLT
WRTLLLSKERLDYVEDYQDLYTSSETFDVEVFSIPSEGLFMAAANRDSRPGSGIYKWRDG
SFQLYQNISTQEARAWRHFTIDGKIFLVVANSREAEPELSVIYRWNQQRRRFLRHQILET
HSALDWEAFHIHNHSFLVVANHRRARDSNHNIHSVIYRWNPDTKLFEVNQTLSTSGAYDW
EFFSVGPYHFLVVANTFDGQTTTISSTVYVWLDGCFQTFQNIPTVGATDWETFQIDGRFF
LAVANSQKVSDRGPSLYSINSTVYELNTLTQTFIRFQDILTHSAVDWEFFTIGEEKFLVV
ANSHDGSSYSLNSVVYRWQGYEGFVPVHSLPTFGCRDWEHFSTDEGSFLVYSSATSRLSK
VFKLRTY
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgtgtcgctccctgctcctcacctgggtgctgctcgccaccagagtccaaagc
cagagctggagaccctgtacagacctgctgcctcttgacctgctggccagagccctgcca
cacccgggacaagccccgcccacacaggtgcagatggttcagtccagagggtccagaggt
ctccgattggccggtgccgtggcgacagagctgagtttcccctcctcccaagtcttcacc
aactgtgactacttccctgctgagttctcattggtcgccaccatcaagatcccgagactg
agacagaagaggaatgagtacatcttctctgtggtggaggagggatctgattcgctgttg
ctggggttatgtgtctcagagaatcgcctccacttcctggtcacgccccctggtgtcggt
gggcggagcaggctgagctttaaagatgttggactggatgacaaccgctggcacaccgtg
gtgctggccgtcaccggaccgtacgccatgctgaccatcgactgtggactgcctctggag
cttaaacaggtccagtcgttccccagcatcctgagcaccagagggtccaagttcttcatc
ggcagcaggaggaggatgaggggacgcttctctggtttactgcgtcagctggttctactt
cctggttcagatgccaggcccagactgtgtccgacctctgaccccagcctggccgagctg
tccgtcccccaggtcctaaagtccaccccgctcaagcctgaccaccatggaccagtttac
ccatacgaggcggaggccagagtgactctgggaaatcctcctccgtgttcgggaccagaa
gacggccagctgtggttcaacgctcagaggaaagacctgctcatctgcgacggactcacg
tggaggacgctgctgctgagtaaggagcgtttggattacgtggaggactaccaggatctg
tacaccagctcggaaaccttcgacgttgaggtcttctccatcccgtctgaaggcctgttc
atggctgcagccaacagggactctcgacccggttcgggtatctacaaatggagagacggg
tcgttccagctctaccagaacatcagcactcaggaggctcgagcctggagacactttacc
atcgacggcaagattttcctggtggtggcgaactccagggaggcggagcctgagctgtca
gtcatctacaggtggaatcagcagcggcggcgtttcctccgtcaccaaatactggagact
cactccgctctggactgggaggcctttcacatccacaaccacagcttcctggtggtagcc
aatcacagacgagccagagactccaaccacaacatccacagtgtgatctacaggtggaac
ccagacacaaagctgtttgaggtgaaccagactctgtccacgtccggagcgtatgactgg
gagttcttctccgtcggaccgtaccacttcctggtggtcgccaacaccttcgacggtcag
accaccaccatcagctccaccgtctacgtctggctggacggctgcttccagaccttccag
aacatcccgacggtgggagcgacggactgggagacgtttcagatcgacggcaggttcttt
ctggccgtcgccaacagtcagaaggtttcggaccgcggcccgagcctctacagcatcaac
tccaccgtgtacgagctcaacacgctcacgcagaccttcatccgcttccaggacatcctc
acacacagcgctgtggactgggagttcttcaccatcggagaggagaagttcttggttgtg
gccaactctcacgacggcagctcgtactctctgaacagcgtcgtctacaggtggcagggt
tacgagggcttcgttccggttcacagtctgccaacgttcggctgcagagactgggagcac
ttcagcaccgacgaaggctccttcctcgtctactccagcgccacctccaggctcagcaag
gtcttcaaactcaggacctactga
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