Siniperca chuatsi (mandarin fish): 122885424
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Entry
122885424 CDS
T08948
Symbol
tank
Name
(RefSeq) TRAF family member-associated NF-kappa-B activator isoform X1
KO
K12650
TRAF family member-associated NF-kappa-B activator
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04140
Autophagy - animal
schu04621
NOD-like receptor signaling pathway
schu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122885424 (tank)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122885424 (tank)
04622 RIG-I-like receptor signaling pathway
122885424 (tank)
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Gene cluster
GFIT
Motif
Pfam:
TBD
CTU2
TMF_TATA_bd
DUF641
PRP21_like_P
HIP1_clath_bdg
DUF4407
DUF4449
Motif
Other DBs
NCBI-GeneID:
122885424
NCBI-ProteinID:
XP_044072429
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All DBs
Position
LG12:13823647..13828821
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AA seq
341 aa
AA seq
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MERNIGDQLNKAFEAYRQVSIEKDNAKKELQQMTEYYERYTQKLQKQIEDQQQLISKLEA
KLSATRQPSGEMKCEPCNHLLDGASAYRKVQYLEKMGTVAVAPNMPVNSSVDYQDMLDAF
EAIQGKFRQIRSLTRRQKDHLKRFHGGNDTSNDQWFSMPIQCTDRTEEAETPFSSTLRSA
VDIPLPPTSLASRGASPEDRDLVDSLTKLSVKFPPSADSEYDFLNSAPERHIGLTMPMKQ
PLRTVPSTLTEEEPVELPMPFVYPTPPSHSTSSSLSQESVRGPQQPLWSPELCDAVDAGT
ELATPQSSSPNKCAFCHAVVPQDRMNSHLYSHFSPKNEADN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggaacatcggagaccagctcaacaaagcttttgaagcttatcgccaggtctcc
attgaaaaggacaatgctaaaaaggagctgcagcaaatgactgaatattatgagcgatac
actcaaaaacttcaaaagcaaatagaggaccagcagcagttgatttcaaaacttgaagct
aagttatcagcaacaaggcaaccatcaggagagatgaaatgtgagccttgcaaccatctc
cttgatggggccagcgcttataggaaagtacagtacctggagaaaatgggcactgttgct
gttgctcctaatatgccagtcaacagcagcgttgactatcaggacatgctggatgcattt
gaagcaattcaagggaaattccgtcagattcggtctctaaccagaagacaaaaagatcac
ctaaaaagattccatggaggaaatgatacatcaaacgatcagtggttctccatgcccatc
cagtgcacagaccgtacagaagaggcagagacacccttttcctcaacgctaaggtcagca
gtggatatcccactcccgcccacgtctctggcgtcccgcggcgccagccccgaggacagg
gacttagtagactctctcaccaaactcagtgtcaaattcccgccctctgcggacagtgaa
tatgacttcctgaacagtgctccagagagacacattggtctgaccatgcccatgaagcag
cctctcagaactgtcccctccacactgacagaggaggagcccgtggaactgcccatgcct
tttgtttaccctacacccccctcccactcaacatcatcctcgctctcccaggagagtgtg
cggggaccccagcagcctctctggagccctgagctgtgtgatgcagttgacgcgggaaca
gagctggcgacgcctcagagcagcagtcctaataaatgtgctttctgccacgctgtggtt
cctcaggaccgaatgaacagccacctctactcgcatttctcgcctaagaatgaagccgac
aattga
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