Siniperca chuatsi (mandarin fish): 122885434
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Entry
122885434 CDS
T08948
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122885434 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
schu04050
]
122885434 (edar)
Cytokine receptors [BR:
schu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
122885434 (edar)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
DUF2852
Motif
Other DBs
NCBI-GeneID:
122885434
NCBI-ProteinID:
XP_044072446
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All DBs
Position
LG12:complement(10828819..10871181)
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AA seq
521 aa
AA seq
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MSERRGQKKSIFLSSLLVCCMFASAEYSSCGEYEFFNQTSNSCQACPQCQPGQEPHMTCG
YGVKDEDFACVPCQQGKYSKGRYEICRRHKDCDALYKATVRVAGTPDSDAECGPCLPGYY
MLENRPRNIYGMVCHSCQNAPRNTKECMSTSGPREKPQIDPGSTTVFPHPHKDSTGQGHL
ATALIIAMSTIFIMAIAIVLIIMFYILKAKPSSQACCSGQVVKAVEAQTNKQEDKKDVPD
NVVIYSEKDEFDKLKAPPQKTVKSENDASSENEQLLSRSIDSDEEAASEKQGLAETNNPN
LCLVNLGNKPDLCLLSLGLLDRDRAYNGTPNITGGQANNTPSPNHIGNVNHITSTNHMSS
VNAINNNNKTPGMLQSRRKKILDLYARACNVTEGLSPTELPFDCLEKASRMLSSSYSSEA
AVVKTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESLC
SDVLGSSEIAAAAGRQGIGSFHSQLVCPSPCSSPSQRCASV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaggagaggtcagaagaagtccatctttctgtcctcattattagtgtgttgt
atgtttgctagtgcggagtattccagctgtggagagtacgaattcttcaaccagaccagt
aacagttgccaggcctgccctcagtgccagccaggacaagagccgcatatgacctgtggc
tacggtgtgaaggatgaggactttgcctgtgtgccgtgccaacaggggaaatattccaaa
gggaggtatgagatctgcagacggcataaagactgtgacgccctctacaaagccactgtt
cgagtagcaggaaccccggacagcgacgctgagtgtggaccctgtttaccagggtattac
atgctggaaaacagacccaggaacatctatgggatggtttgccactcttgccagaacgca
ccacgcaacaccaaagaatgcatgtcaacaagcgggccaagagaaaaacctcaaattgac
cctggtagcactactgtgtttcctcatccacataaagattccaccggacaaggtcaccta
gcaacagctctcattatcgccatgtcaaccattttcatcatggccattgccatcgtcctt
atcatcatgttttacatcctgaaggccaaaccgagtagccaggcatgttgttctggacaa
gttgtgaaggcagtggaagctcagaccaacaaacaggaagacaagaaagatgtccctgac
aatgtggtgatctactcagagaaagacgagtttgacaaactaaaagctcctcctcagaag
acggtgaaaagtgaaaatgacgcatcatcagagaacgagcagctgttgagccgtagcatt
gacagcgatgaggaggcggcgtctgagaagcaaggattagctgagactaacaaccccaac
ctgtgcctcgtcaacctgggaaacaagcccgacctctgcctgctctctctgggcctcttg
gaccgcgacagagcctacaacgggacccccaacattacaggcggccaggccaataacacc
ccgagtcccaaccacatcggcaatgtcaaccacatcaccagcaccaatcacatgagcagt
gtgaacgcaatcaataacaacaataaaaccccagggatgctacagagtcgaaggaaaaag
atcctggatctgtatgccagagcctgcaatgtgacagagggcctgagcccaacagagctt
cccttcgactgtctggagaaggccagccgcatgctgagctcctcctacagcagcgaggcg
gccgtggtgaagacgtggaggcatctggccgagagcttcgggctgaagcgtgacgagatc
ggtggcatgagcgacggcctgcagctcttcgagagagtgagcacggcgggctacagcatc
cccgacctcctgacccgcctggtacagatcgagaggctggacgctgttgagtcactctgc
tcggacgtgctgggcagcagtgagatagcggcggctgccggacggcagggcatcggcagt
tttcacagccagttggtctgtccatccccgtgctcatctccatcccagcgctgcgccagt
gtctaa
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