Siniperca chuatsi (mandarin fish): 122885474
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Entry
122885474 CDS
T08948
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122885474 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122885474 (u2af1)
Spliceosome [BR:
schu03041
]
Complex A
U2 snRNP components
U2 related factors
122885474 (u2af1)
Complex B
122885474 (u2af1)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
122885474
NCBI-ProteinID:
XP_044072524
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All DBs
Position
LG12:complement(17990498..17999805)
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AA seq
232 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SADGLTCAISDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRYE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGRHRSRSRSRERRSRSRDRGRGGGRDHERRRSRDRERSGRF
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcagagtacctggcgtccatttttgggacagagaaagataaggtcaactgctctttt
tattttaaaatcggtgcctgtcgacatggtgaccgctgctccagattacacaataagccg
acattcagccagacgattgctctcctgaacatttaccggaaccctcaaaacagtgcccag
tctgctgatggtctgacctgtgccatcagtgacatggagatgcaggagcactatgacgag
ttctttgaggaggtcttcacagagatggaagaaaagtatggagaggtggaggaaatgaac
gtatgtgacaacctcggagaccacctagtaggaaatgtgtatgtgaagttccgttatgaa
gaggatgccgagaaggccgtgatagacctgaataatcggtggtttaatggacagcccatc
catgctgagctctctccagtcacagacttcagagaagcctgctgtcgccaatatgaaatg
ggggaatgcactcgtggtggcttctgcaacttcatgcatctgaagcccatctcacgtgaa
ctgaggagagagctctatgggcgtcggaggaagggccgccataggtctcggtctcgatcg
agagagaggcgatcccgctcaagggacagaggtcgaggaggtggccgtgaccacgagaga
cgtcgctccagagacagagagcgttcaggacgattctga
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